EDAM - The data analysis and management ontology

Last uploaded: February 26, 2021
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Preferred Name

protein
Synonyms
Definitions

Non-sequence characters may be used for gaps and translation stop. Alphabet for a protein sequence with possible ambiguity, unknown positions and non-sequence characters.
ID

http://edamontology.org/format_1208
comment

Non-sequence characters may be used for gaps and translation stop.
Created in

beta12orEarlier
hasDefinition

Alphabet for a protein sequence with possible ambiguity, unknown positions and non-sequence characters.
inSubset

http://edamontology.org/bio

http://edamontology.org/formats
label

protein
prefixIRI

format_1208
prefLabel

protein
seeAlso

http://onto.eva.mpg.de/ontologies/gfo-bio.owl#Amino_acid_sequence
subClassOf

http://edamontology.org/format_2571

http://edamontology.org/format_2330
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http://edamontology.org/format_1208 ITO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_36080 UPHENO LOOM
http://purl.obolibrary.org/obo/PR_000000001 UPHENO LOOM
http://www.radlex.org/RID/RID1554 RADLEX LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0033684 OCHV LOOM
https://w3id.org/codo#VGO_Protein CODO LOOM
http://purl.bioontology.org/ontology/VANDF/4020765 VANDF LOOM
http://purl.obolibrary.org/obo/GO_0003675 GO-EXT LOOM
http://purl.uniprot.org/core/Protein GLYCOCOO LOOM
http://purl.uniprot.org/core/Protein FTC LOOM
http://purl.obolibrary.org/obo/MI_0326 MI LOOM
http://edamontology.org/format_1208 ITO LOOM
urn:absolute:vegetable#Protein DILON LOOM
http://www.biopax.org/release/biopax-level3.owl#Protein MIM LOOM
http://www.biopax.org/release/biopax-level3.owl#Protein WIKIPATHWAYS LOOM
http://www.biopax.org/release/biopax-level3.owl#Protein DIKB LOOM
http://www.biopax.org/release/biopax-level3.owl#Protein BP LOOM
http://purl.bioontology.org/ontology/PMR.owl#Protein PMR LOOM
http://www.projecthalo.com/aura#Protein AURA LOOM
http://www.cvrgrid.org/ontologies/Electrophysiology#Protein EP LOOM
http://www.semanticweb.org/ontologies/2010/3/Ontology1271664172453.owl#protein PLIO LOOM
http://purl.obolibrary.org/obo/MCBCC_0000015#Protein MCBCC LOOM
http://www.semanticweb.org/hanfei/ontologies/2020/9/untitled-ontology-1306#Protein COVID-19-ONT-PM LOOM
http://purl.bioontology.org/ontology/MEDDRA/10036987 MEDDRA LOOM
http://www.flyglycodb.org/ontologies/2015/Protein FLYGLYCODB LOOM
http://purl.bioontology.org/ontology/NDFRT/N0000148318 NDFRT LOOM
http://radlex.org/RID/RID1554 RADLEX LOOM
https://w3id.org/chemrof/Protein CHEMROF LOOM
http://nmrML.org/nmrCV#NMR:1000882 NMR LOOM
http://purl.obolibrary.org/obo/PR_000000001 CARO LOOM
http://purl.obolibrary.org/obo/PR_000000001 FOODON LOOM
http://purl.obolibrary.org/obo/PR_000000001 NPOKB LOOM
http://purl.obolibrary.org/obo/PR_000000001 CL LOOM
http://purl.obolibrary.org/obo/PR_000000001 PR LOOM
http://purl.obolibrary.org/obo/PR_000000001 DRON LOOM
http://purl.obolibrary.org/obo/PR_000000001 PDRO LOOM
http://purl.obolibrary.org/obo/PR_000000001 UBERON LOOM
http://purl.obolibrary.org/obo/PR_000000001 PROCO LOOM
http://purl.obolibrary.org/obo/PR_000000001 EUPATH LOOM
http://purl.obolibrary.org/obo/PR_000000001 CLO LOOM
http://purl.obolibrary.org/obo/PR_000000001 OBI LOOM
http://purl.obolibrary.org/obo/PR_000000001 INBANCIDO LOOM
http://purl.obolibrary.org/obo/PR_000000001 PSDO LOOM
http://purl.obolibrary.org/obo/PR_000000001 FOVT LOOM
http://purl.obolibrary.org/obo/PR_000000001 CHEAR LOOM
http://purl.obolibrary.org/obo/PR_000000001 OMIT LOOM
http://purl.obolibrary.org/obo/PR_000000001 ONE LOOM
http://purl.obolibrary.org/obo/PR_000000001 OPMI LOOM
http://purl.obolibrary.org/obo/PR_000000001 DTO LOOM
http://purl.obolibrary.org/obo/PR_000000001 RBO LOOM
http://purl.obolibrary.org/obo/PR_000000001 OBI_BCGO LOOM
http://purl.obolibrary.org/obo/PR_000000001 BCO LOOM
http://purl.obolibrary.org/obo/PR_000000001 LIFO LOOM
http://purl.obolibrary.org/obo/PR_000000001 XPO LOOM
http://purl.obolibrary.org/obo/PR_000000001 EGO LOOM
http://purl.obolibrary.org/obo/PR_000000001 BMONT LOOM
http://purl.obolibrary.org/obo/PR_000000001 COVID-19 LOOM
http://purl.obolibrary.org/obo/PR_000000001 PCL LOOM
http://purl.obolibrary.org/obo/PR_000000001 PATO LOOM
http://purl.obolibrary.org/obo/PR_000000001 NIFDYS LOOM
http://purl.obolibrary.org/obo/PR_000000001 OBIB LOOM
http://purl.obolibrary.org/obo/PR_000000001 GO-PLUS LOOM
http://purl.obolibrary.org/obo/PR_000000001 OLAM LOOM
http://purl.obolibrary.org/obo/PR_000000001 HHEAR LOOM
http://purl.obolibrary.org/obo/PR_000000001 DDSS LOOM
http://purl.obolibrary.org/obo/PR_000000001 INO LOOM
http://purl.obolibrary.org/obo/PR_000000001 STATO LOOM
http://purl.obolibrary.org/obo/PR_000000001 FLU LOOM
http://purl.obolibrary.org/obo/PR_000000001 CIDO LOOM
http://purl.obolibrary.org/obo/PR_000000001 OBI_IEE LOOM
http://purl.obolibrary.org/obo/PR_000000001 NIFSTD LOOM
http://purl.obolibrary.org/obo/PR_000000001 ECAO LOOM
http://purl.obolibrary.org/obo/PR_000000001 KTAO LOOM
http://purl.obolibrary.org/obo/PR_000000001 PHIPO LOOM
http://purl.obolibrary.org/obo/PR_000000001 FYPO LOOM
http://purl.obolibrary.org/obo/PR_000000001 GENEPIO LOOM
http://purl.obolibrary.org/obo/PR_000000001 ECTO LOOM
http://purl.obolibrary.org/obo/PR_000000001 OHMI LOOM
http://purl.obolibrary.org/obo/PR_000000001 NCRO LOOM
http://purl.obolibrary.org/obo/PR_000000001 HINO LOOM
http://purl.obolibrary.org/obo/PR_000000001 DRON LOOM
http://purl.obolibrary.org/obo/PR_000000001 MAXO LOOM
http://purl.obolibrary.org/obo/PR_000000001 COB LOOM
http://purl.obolibrary.org/obo/PR_000000001 MHCRO LOOM
http://purl.obolibrary.org/obo/PR_000000001 VO LOOM
http://purl.obolibrary.org/obo/PR_000000001 CHEMINF LOOM
http://purl.obolibrary.org/obo/PR_000000001 AISM LOOM
http://purl.obolibrary.org/obo/PR_000000001 NMDCO LOOM
http://onto.eva.mpg.de/ontologies/gfo-bio.owl#Protein GFO-BIO LOOM
http://www.w3.org/2001/sw/hcls/ns/transmed/TMO_0035 TMO LOOM
https://purl.dsmz.de/schema/Protein D3O LOOM
http://www.bioassayontology.org/bao#BAO_0000175 BAO LOOM
http://www.bioassayontology.org/bao#BAO_0000175 INCENTIVE LOOM
http://www.bioassayontology.org/bao#BAO_0000175 INCENTIVE-VARS LOOM
http://purl.obolibrary.org/obo/ODGI.owl#Protein OGDI LOOM
http://purl.obolibrary.org/obo/IDOMAL_0001067 IDOMAL LOOM
http://www.shojaee.com/shr/shr.owl#Protein SHR LOOM
http://purl.obolibrary.org/obo/ND_00055012 NDDO LOOM
http://purl.org/zonmw/id-amr/10085 ID-AMR LOOM
http://scai.fraunhofer.de/CSEO#CSEO_00000827 CSEO LOOM
http://semanticscience.org/resource/SIO_010043 HASCO LOOM
http://semanticscience.org/resource/SIO_010043 HHEARP LOOM
http://semanticscience.org/resource/SIO_010043 SIO LOOM
http://semanticscience.org/resource/SIO_010043 CHEAR LOOM
http://semanticscience.org/resource/SIO_010043 REXO LOOM
http://semanticscience.org/resource/SIO_010043 BIOMO LOOM
http://semanticscience.org/resource/SIO_010043 GEXO LOOM
http://semanticscience.org/resource/SIO_010043 SCO LOOM
http://semanticscience.org/resource/SIO_010043 HHEAR LOOM
http://semanticscience.org/resource/SIO_010043 POEM LOOM
http://semanticscience.org/resource/SIO_010043 RETO LOOM
http://purl.obolibrary.org/obo/MIRO_10000220 MIRO LOOM
https://w3id.org/biolink/vocab/Protein BIOLINK LOOM
http://purl.obolibrary.org/obo/PORO_0000959 PORO LOOM
http://www.uniprot.org/core/Protein GLYCORDF LOOM
http://chem.deri.ie/granatum#Protein CANCO LOOM
http://www.cea.fr/ontotoxnuc#Proteine ONTOTOXNUC LOOM
http://purl.org/obo/owlapi/fma#FMA_67257 BIOMODELS LOOM
http://purl.org/obo/owl/CHEBI#CHEBI_36080 NPO LOOM
http://purl.org/stemnet/MHC#Protein MHC LOOM
https://w3id.org/reproduceme#Protein REPRODUCE-ME LOOM
http://purl.bioontology.org/net/brunel/panda#Protein PANDA LOOM
http://vocabularies.wikipathways.org/wp#Protein WIKIPATHWAYS LOOM
http://purl.bioontology.org/ontology/LNC/LP32142-9 LOINC LOOM
http://www.semanticweb.org/admin/ontologies/2022/7/MIO:00716 MIO LOOM
http://purl.org/skeletome/bonedysplasia#Protein BDO LOOM
http://www.imgt.org/download/IMGT-ONTOLOGY/IMGT-ONTOLOGY-v1-0-3.owl#protein IMGT-ONTOLOGY LOOM
http://purl.obolibrary.org/obo/PRO_000000001 INBANCIDO LOOM
http://purl.obolibrary.org/obo/PRO_000000001 OHPI LOOM
http://bioontology.org/projects/ontologies/birnlex#birnlex_23 BIRNLEX LOOM
http://www.ifomis.org/acgt/1.0#Protein ACGT-MO LOOM
http://purl.obolibrary.org/obo/MS_1000882 MS LOOM
http://purl.jp/bio/12/glyco/glycan#protein GLYCORDF LOOM
http://purl.org/zonmw/covid19/10184 ZONMW-CONTENT LOOM
http://purl.obolibrary.org/obo/CLAO_0001254 CLAO LOOM
http://purl.obolibrary.org/obo/BiPOm#protein BIPOM LOOM
http://www.phoc.org.cn/pmo/class/PMO_00035835 PMAPP-PMO LOOM
http://psink.de/scio/Protein SCIO LOOM
http://purl.obolibrary.org/obo/OGI.owl#Protein OGI LOOM
http://purl.obolibrary.org/obo/OGI.owl#Protein OGSF LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C17021 HRAVS LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C17021 NCIT LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C17021 HRAVS LOOM
http://www.semanticweb.org/ontologies/2008/8/MultiscaleSkinPhysiologyOntology.owl#Protein SPO LOOM
http://purl.bioontology.org/ontology/SNOMEDCT/88878007 SNOMEDCT LOOM
http://semanticscience.org/resource/Protein CHEAR LOOM
http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Molecule.owl#sao26622963 NIFSUBCELL LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 CARO LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 IDO LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 FOODON LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 NPOKB LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 DRON LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 PDRO LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 UBERON LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 CLO LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 GCBO LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 CCONT LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 FOVT LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 HOIP LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 RBO LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 VDOT LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 EFO LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 XPO LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 SP LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 PCL LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 PATO LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 BIPON LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 NIFDYS LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 CTENO LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 GO-PLUS LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 CDNO LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 BERO LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 ONS LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 EFO LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 NBO LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 HUPSON LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 HHEAR LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 DDSS LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 TXPO LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 BIOMODELS LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 GSSO LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 CHEBI LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 NIFSTD LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 ECAO LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 KTAO LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 PHIPO LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 PECO LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 VIDO LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 FYPO LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 DIDEO LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 ECTO LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 SLSO LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 DRON LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 MAXO LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 IDO-COVID-19 LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 IDODEN LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 ZP LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 AISM LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 NMDCO LOOM
http://purl.obolibrary.org/obo/CHEBI_36080 OBA LOOM
http://purl.obolibrary.org/obo/pr.owl#PR_000000001 ONSTR LOOM
http://purl.obolibrary.org/obo/SIO_010043 CCO LOOM
http://purl.obolibrary.org/obo/WC_protein WC LOOM
http://www.semanticweb.org/zchero/ontologies/2023/11/SepsisOntology#Protein SEPON LOOM
http://purl.org/obo/owl/GO#GO_0003675 BIOMODELS LOOM
http://gbol.life/0.1/Protein GBOL LOOM
http://purl.obolibrary.org/obo/NCIT_C17021 PREMEDONTO LOOM
http://purl.obolibrary.org/obo/NCIT_C17021 BERO LOOM
http://uri.neuinfo.org/nif/nifstd/birnlex_23 NIFDYS LOOM
http://uri.neuinfo.org/nif/nifstd/birnlex_23 NIFSTD LOOM
http://purl.org/obo/owl/PRO#PRO_000000001 CAO LOOM
http://purl.obolibrary.org/obo/VariO_0277 VARIO LOOM
http://www.owl-ontologies.com/NPOntology.owl#Protein NATPRO LOOM
http://uri.neuinfo.org/nif/nifstd/sao26622963 NPOKB LOOM
http://uri.neuinfo.org/nif/nifstd/sao26622963 NIFSTD LOOM
http://purl.org/sig/ont/fma/fma67257 FMA LOOM
http://www.bootstrep.eu/ontology/GRO#Protein GRO LOOM
http://purl.bioontology.org/ontology/LNC/LP15838-3 LOINC LOOM
http://ccdb.ucsd.edu/SAO/1.2#sao26622963 SAO LOOM
http://www.loria.fr/~coulet/ontology/snpontology/version1.6/snpontology_full.owl#protein SNPO LOOM
http://purl.obolibrary.org/obo/GMM_29 GMM LOOM
http://purl.bioontology.org/ontology/LNC/MTHU001951 LOINC LOOM
http://purl.obolibrary.org/obo/LEPAO_0000011 LEPAO LOOM
http://purl.bioontology.org/ontology/CSP/2446-3000 CRISP LOOM
http://jermontology.org/ontology/JERMOntology#Protein JERM LOOM
http://regenbase.org/ontology#RB_0000061 RB LOOM
http://www.case.edu/EpilepsyOntology.owl#Protein EPSO LOOM
http://purl.bioontology.org/ontology/CPT/1011659 CPT LOOM
http://purl.org/net/orth#Protein ORTH LOOM
http://www.co-ode.org/ontologies/galen#Protein GALEN LOOM