Proteomics Data and Process Provenance Ontology

Last uploaded: August 21, 2015
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Preferred Name

organism
Synonyms
Definitions

A biological species, such as Homo sapiens or Arabidopsis thaliana. The taxonomic classification of a biological species are modeled in other ontologies. http://obo.sourceforge.net/cgi-bin/detail.cgi?ncbi_taxonomy http://obo.sourceforge.net/cgi-bin/detail.cgi?newt Instances of specific organisms may be specified iwithin ProPreO, but their complete systematic taxonomy should be found in these other ontologies. [Dr. York & Satya: 06/28/05]
ID

http://lsdis.cs.uga.edu/projects/glycomics/propreo#organism
comment

A biological species, such as Homo sapiens or Arabidopsis thaliana. The taxonomic classification of a biological species are modeled in other ontologies. http://obo.sourceforge.net/cgi-bin/detail.cgi?ncbi_taxonomy http://obo.sourceforge.net/cgi-bin/detail.cgi?newt Instances of specific organisms may be specified iwithin ProPreO, but their complete systematic taxonomy should be found in these other ontologies. [Dr. York & Satya: 06/28/05]
prefixIRI

organism
prefLabel

organism
subClassOf

http://lsdis.cs.uga.edu/projects/glycomics/propreo#biological_continuant
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http://www.semanticweb.org/ontologies/2010/5/22/Ontology1277229984000.owl#HPI:0000001 HPIO LOOM
http://www.w3.org/2001/sw/hcls/ns/transmed/TMO_0144 TMO LOOM
http://ecoinformatics.org/oboe/oboe.1.0/oboe-biology.owl#Organism OBOE-SBC LOOM
http://purl.obolibrary.org/obo/OPMI_0000421 INBANCIDO LOOM
http://www.case.edu/EpSO.owl#Organism MEPO LOOM
http://purl.obolibrary.org/obo/SIO_010000 CCO LOOM
http://purl.obolibrary.org/obo/CisaviA_0000795 CISAVIADO LOOM
http://purl.obolibrary.org/obo/LifO_0000005 LIFO LOOM
http://purl.obolibrary.org/obo/LifO_0000005 INO LOOM
http://purl.obolibrary.org/obo/MooculA_0000795 MOOCULADO LOOM
http://uri.neuinfo.org/nif/nifstd/birnlex_376 NIFSTD LOOM
http://purl.obolibrary.org/obo/ID_0000075 BCTEO LOOM
http://www.loria.fr/~coulet/ontology/snpontology/version1.6/snpontology_full.owl#organism SNPO LOOM
http://www.bioassayontology.org/bao#BAO_0000551 BAO LOOM
http://purl.dataone.org/odo/ECSO_00000312 ECSO LOOM
http://uri.neuinfo.org/nif/nifstd/birnlex_2 NIFSTD LOOM
http://purl.org/stemnet/MHC#Organism MHC LOOM
http://purl.obolibrary.org/obo/ODGI.owl#Organism OGDI LOOM
http://purl.obolibrary.org/obo/CARO_0010004 PCO LOOM
http://purl.org/cpr/organism CPRO LOOM
http://purl.org/cpr/organism SDO LOOM
http://rdf.biosemantics.org/ontologies/genomecomponents#Organism GCO LOOM
http://www.owl-ontologies.com/MO.owl#Organism MONO LOOM
http://purl.bioontology.org/ontology/RCD/X79o9 RCD LOOM
http://www.cea.fr/ontotoxnuc#Organisme ONTOTOXNUC LOOM
http://www.semanticweb.org/jdr2160/ontologies/2015/5/venom_ontology#Organism CU-VO LOOM
http://purl.org/net/orth#Organism ORTH LOOM
http://www.projecthalo.com/aura#Organism AURA LOOM
http://www.lungmap.net/ontologies/database#organism LUNGMAP-MOUSE LOOM
http://purl.obolibrary.org/obo/PNADO_0000123 PNADO LOOM
http://purl.bioontology.org/ontology/SNOMEDCT/410607006 SNOMEDCT LOOM
http://doe-generated-ontology.com/OntoAD#Organism ONTOAD LOOM
http://purl.obolibrary.org/obo/MoocciA_0000795 MOOCCIADO LOOM
http://purl.obolibrary.org/obo/FBbt_00000001 DPO LOOM
http://purl.obolibrary.org/obo/FBbt_00000001 FB-BT LOOM
http://purl.obolibrary.org/obo/SDDO_3000065 SLSO LOOM
http://www.bootstrep.eu/ontology/GRO#Organism GRO LOOM
http://www.semanticweb.org/zchero/ontologies/2023/11/SepsisOntology#Organism SEPON LOOM
https://code.ecoinformatics.org/code/semtools/trunk/dev/oboe/oboe-sbc.owl#Organism OBOE-SBC LOOM
http://brd.bsvgateway.org/api/organism/ ABD LOOM
http://jermontology.org/ontology/JERMOntology#Organism JERM LOOM
http://purl.obolibrary.org/obo/EKB_0000011 LHN LOOM
http://purl.obolibrary.org/obo/HaroreA_0000795 HAROREADO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 IDO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 FOODON LOOM
http://purl.obolibrary.org/obo/OBI_0100026 NPOKB LOOM
http://purl.obolibrary.org/obo/OBI_0100026 HTN LOOM
http://purl.obolibrary.org/obo/OBI_0100026 PR LOOM
http://purl.obolibrary.org/obo/OBI_0100026 ENM LOOM
http://purl.obolibrary.org/obo/OBI_0100026 MFMO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 OAE LOOM
http://purl.obolibrary.org/obo/OBI_0100026 DRON LOOM
http://purl.obolibrary.org/obo/OBI_0100026 OMRSE LOOM
http://purl.obolibrary.org/obo/OBI_0100026 NEIO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 PDRO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 EUPATH LOOM
http://purl.obolibrary.org/obo/OBI_0100026 CLO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 OBI LOOM
http://purl.obolibrary.org/obo/OBI_0100026 VICO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 PO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 CAO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 INBANCIDO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 OVAE LOOM
http://purl.obolibrary.org/obo/OBI_0100026 PSDO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 OHPI LOOM
http://purl.obolibrary.org/obo/OBI_0100026 VIVO-ISF LOOM
http://purl.obolibrary.org/obo/OBI_0100026 VSO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 CCONT LOOM
http://purl.obolibrary.org/obo/OBI_0100026 FOVT LOOM
http://purl.obolibrary.org/obo/OBI_0100026 OCMR LOOM
http://purl.obolibrary.org/obo/OBI_0100026 HOIP LOOM
http://purl.obolibrary.org/obo/OBI_0100026 CHEAR LOOM
http://purl.obolibrary.org/obo/OBI_0100026 NGBO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 GALLONT LOOM
http://purl.obolibrary.org/obo/OBI_0100026 OMIT LOOM
http://purl.obolibrary.org/obo/OBI_0100026 OBCS LOOM
http://purl.obolibrary.org/obo/OBI_0100026 ONE LOOM
http://purl.obolibrary.org/obo/OBI_0100026 OPMI LOOM
http://purl.obolibrary.org/obo/OBI_0100026 RBO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 OBI_BCGO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 AGRO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 BMS-LM LOOM
http://purl.obolibrary.org/obo/OBI_0100026 BCO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 EFO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 ORCS LOOM
http://purl.obolibrary.org/obo/OBI_0100026 EGO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 LABO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 OOSTT LOOM
http://purl.obolibrary.org/obo/OBI_0100026 SP LOOM
http://purl.obolibrary.org/obo/OBI_0100026 ENVO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 HSO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 VBO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 ORNASEQ LOOM
http://purl.obolibrary.org/obo/OBI_0100026 VIO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 NIFDYS LOOM
http://purl.obolibrary.org/obo/OBI_0100026 OBIB LOOM
http://purl.obolibrary.org/obo/OBI_0100026 BERO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 AFO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 ONS LOOM
http://purl.obolibrary.org/obo/OBI_0100026 EFO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 OLAM LOOM
http://purl.obolibrary.org/obo/OBI_0100026 HUPSON LOOM
http://purl.obolibrary.org/obo/OBI_0100026 HHEAR LOOM
http://purl.obolibrary.org/obo/OBI_0100026 DDSS LOOM
http://purl.obolibrary.org/obo/OBI_0100026 OGG LOOM
http://purl.obolibrary.org/obo/OBI_0100026 TXPO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 APOLLO-SV LOOM
http://purl.obolibrary.org/obo/OBI_0100026 STATO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 TYPON LOOM
http://purl.obolibrary.org/obo/OBI_0100026 PLANTSO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 VIVO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 CHRO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 FLU LOOM
http://purl.obolibrary.org/obo/OBI_0100026 CIDO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 OBI_IEE LOOM
http://purl.obolibrary.org/obo/OBI_0100026 NIFSTD LOOM
http://purl.obolibrary.org/obo/OBI_0100026 MPIO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 ICO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 KTAO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 VIDO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 SWO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 DIDEO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 OBIWS LOOM
http://purl.obolibrary.org/obo/OBI_0100026 GENEPIO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 GENO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 ECTO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 OHMI LOOM
http://purl.obolibrary.org/obo/OBI_0100026 OGG-MM LOOM
http://purl.obolibrary.org/obo/OBI_0100026 IDOMAL LOOM
http://purl.obolibrary.org/obo/OBI_0100026 OBOREL LOOM
http://purl.obolibrary.org/obo/OBI_0100026 NCRO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 SLSO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 EXMO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 OPL LOOM
http://purl.obolibrary.org/obo/OBI_0100026 CHR LOOM
http://purl.obolibrary.org/obo/OBI_0100026 DRON LOOM
http://purl.obolibrary.org/obo/OBI_0100026 MAXO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 IDO-COVID-19 LOOM
http://purl.obolibrary.org/obo/OBI_0100026 ERO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 IDODEN LOOM
http://purl.obolibrary.org/obo/OBI_0100026 COB LOOM
http://purl.obolibrary.org/obo/OBI_0100026 MHCRO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 VO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 ODNAE LOOM
http://purl.obolibrary.org/obo/OBI_0100026 NIO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 FNS-H LOOM
http://purl.obolibrary.org/obo/OBI_0100026 AISM LOOM
http://purl.obolibrary.org/obo/OBI_0100026 NMDCO LOOM
http://purl.obolibrary.org/obo/OBI_0100026 OGSF LOOM
http://purl.obolibrary.org/obo/NCIT_C14250 PREMEDONTO LOOM
http://purl.obolibrary.org/obo/NCIT_C14250 BERO LOOM
http://purl.obolibrary.org/obo/NCIT_C14250 ORTH LOOM
http://purl.obolibrary.org/obo/NCIT_C14250 GENEPIO LOOM
http://purl.obolibrary.org/obo/NCIT_C14250 MCO LOOM
http://www.co-ode.org/ontologies/galen#Organism GALEN LOOM
http://rs.tdwg.org/dwc/terms/Organism BCO LOOM
http://ontology.neuinfo.org/NIF/Backend/BIRNLex-OBO-UBO.owl#birnlex_2 ADAR LOOM
http://bioontology.org/projects/ontologies/birnlex#birnlex_2 BIRNLEX LOOM
http://www.semanticweb.org/shoshana/ontologies/2014/8/untitled-ontology-8#Organism ESFO LOOM
http://purl.jp/bio/4/id/200906079942882108 IOBC LOOM
http://purl.obolibrary.org/obo/BSA_0000038 BSAO LOOM
http://chem.deri.ie/granatum#Organism CANCO LOOM
http://purl.obolibrary.org/obo/PhmammA_0000795 PHMAMMADO LOOM
http://purl.obolibrary.org/obo/MooccuA_0000795 MOOCCUADO LOOM
http://purl.bioontology.org/net/brunel/panda#Organism PANDA LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0029235 OCHV LOOM
http://purl.obolibrary.org/obo/WBbt_0007833 WB-BT LOOM
http://purl.obolibrary.org/obo/TrOn_0000024 TRON LOOM
https://w3id.org/reproduceme#Organism REPRODUCE-ME LOOM
http://purl.jp/bio/10/mpo#MPO_00001 MPO LOOM
http://opendata.inra.fr/AHOL/AHOL_0004000 AHOL LOOM
http://mged.sourceforge.net/ontologies/MGEDOntology.owl#Organism MO LOOM
http://purl.org/zonmw/generic/10008 ZONMW-CONTENT LOOM
http://purl.org/zonmw/generic/10008 ZONMW-GENERIC LOOM
http://purl.org/zonmw/generic/10008 ID-AMR LOOM
http://purl.org/net/OCRe/OCRe.owl#OCRE400064 OCRE LOOM
http://purl.obolibrary.org/obo/HaauraA_0000795 HAAURAADO LOOM
http://gbol.life/0.1/Organism GBOL LOOM
http://purl.obolibrary.org/obo/PhfumiA_0000795 PHFUMIADO LOOM
http://semanticscience.org/resource/SIO_010000 HASCO LOOM
http://semanticscience.org/resource/SIO_010000 HHEARP LOOM
http://semanticscience.org/resource/SIO_010000 SIO LOOM
http://semanticscience.org/resource/SIO_010000 CHEAR LOOM
http://semanticscience.org/resource/SIO_010000 REXO LOOM
http://semanticscience.org/resource/SIO_010000 BIOMO LOOM
http://semanticscience.org/resource/SIO_010000 GEXO LOOM
http://semanticscience.org/resource/SIO_010000 SCO LOOM
http://semanticscience.org/resource/SIO_010000 HHEAR LOOM
http://semanticscience.org/resource/SIO_010000 POEM LOOM
http://semanticscience.org/resource/SIO_010000 GSSO LOOM
http://semanticscience.org/resource/SIO_010000 RETO LOOM
http://purl.obolibrary.org/obo/organism IBO LOOM
https://www.fns-cloud.eu/microbiome/FNS-H_0000000022 FNS-H LOOM
http://purl.obolibrary.org/obo/CiinteA_0000795 CIINTEADO LOOM
http://purl.bioontology.org/ontology/CSP/4000-0232 CRISP LOOM
http://www.ontologydesignpatterns.org/ont/dul/DUL.owl#Organism BCI-O LOOM
http://www.owl-ontologies.com/Ontology1358660052.owl#Organism PEDTERM LOOM
http://purl.org/hed/releases/2024-06-10/hed/HED_0012230 HED LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Organisms CSEO LOOM
http://purl.bioontology.org/ontology/STY/T001 MEDLINEPLUS LOOM
http://purl.bioontology.org/ontology/STY/T001 ICD9CM LOOM
http://purl.bioontology.org/ontology/STY/T001 RCD LOOM
http://purl.bioontology.org/ontology/STY/T001 MESH LOOM
http://purl.bioontology.org/ontology/STY/T001 SNMI LOOM
http://purl.bioontology.org/ontology/STY/T001 CPT LOOM
http://purl.bioontology.org/ontology/STY/T001 MEDDRA LOOM
http://purl.bioontology.org/ontology/STY/T001 WHO-ART LOOM
http://purl.bioontology.org/ontology/STY/T001 ICD10CM LOOM
http://purl.bioontology.org/ontology/STY/T001 MDDB LOOM
http://purl.bioontology.org/ontology/STY/T001 ICD10 LOOM
http://purl.bioontology.org/ontology/STY/T001 STY LOOM
http://purl.bioontology.org/ontology/STY/T001 ATC LOOM
http://purl.bioontology.org/ontology/STY/T001 PDQ LOOM
http://purl.bioontology.org/ontology/STY/T001 NDDF LOOM
http://purl.bioontology.org/ontology/STY/T001 RXNORM LOOM
http://purl.bioontology.org/ontology/STY/T001 MSTDE LOOM
http://purl.bioontology.org/ontology/STY/T001 HL7 LOOM
http://purl.bioontology.org/ontology/STY/T001 NDFRT LOOM
http://purl.bioontology.org/ontology/STY/T001 MSTDE-FRE LOOM
http://purl.bioontology.org/ontology/STY/T001 CRISP LOOM
http://purl.bioontology.org/ontology/STY/T001 AI-RHEUM LOOM
http://purl.bioontology.org/ontology/STY/T001 ICD10PCS LOOM
http://purl.bioontology.org/ontology/STY/T001 SNOMEDCT LOOM
http://purl.bioontology.org/ontology/STY/T001 COSTART LOOM
http://purl.bioontology.org/ontology/STY/T001 NCBITAXON LOOM
http://purl.bioontology.org/ontology/STY/T001 HCPCS LOOM
http://purl.bioontology.org/ontology/STY/T001 VANDF LOOM
http://purl.bioontology.org/ontology/STY/T001 LOINC LOOM
http://purl.bioontology.org/ontology/STY/T001 OMIM LOOM
http://purl.bioontology.org/ontology/STY/T001 ROO LOOM
http://purl.bioontology.org/ontology/STY/T001 ICPC2P LOOM
http://purl.obolibrary.org/obo/CARO_0001010 CARO LOOM
http://purl.obolibrary.org/obo/CARO_0001010 DPO LOOM
http://purl.obolibrary.org/obo/CARO_0001010 AISM LOOM
http://onto.eva.mpg.de/ontologies/gfo-bio.owl#Organism GFO-BIO LOOM
http://sweetontology.net/matrBiomass/Organism SWEET LOOM
https://w3id.org/opencare#Organism OCO LOOM
http://www.ifomis.org/acgt/1.0#Organism ACGT-MO LOOM
https://w3id.org/inbio#_000054 INBIO LOOM
http://bioontology.org/projects/ontologies/birnlex#birnlex_376 BIRNLEX LOOM
http://www.icn.ch/icnp#Organism ICNP LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C14250 NCIT LOOM
http://www.fao.org/aims/aos/cwr.owl#Organism CCON LOOM