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National Center for Biotechnology Information (NCBI) Organismal Classification

Last uploaded: March 22, 2026






Details
Acronym NCBITAXON
Visibility Public
Description The NCBI Taxonomy Database is a curated classification and nomenclature for all of the organisms in the public sequence databases.
Status Production
Format UMLS
Categories
Taxonomic Classification
Groups
Unified Medical Language System
OBO Foundry
License InformationThis ontology is made available via the UMLS. Users of all UMLS ontologies must abide by the terms of the UMLS license.
Alternative name
NCBI See more...
Contact
Ncbi Information ([email protected])
Creation date
November 3, 2025
Deprecated
false See more...
Homepage
http://www.ncbi.nlm.nih.gov/taxonomy See more...
Imports
http://www.w3.org/2004/02/skos/core
http://www.w3.org/2004/02/skos/core
Notes
RDF Version of the UMLS ontology NCBI; converted with the UMLS2RDF tool (https://github.com/ncbo/umls2rdf), developed by the NCBO project. See more...
Object creation date property
http://purl.org/dc/elements/1.1/created
http://purl.org/dc/elements/1.1/created
Object modification date property
http://purl.org/dc/elements/1.1/modified
http://purl.org/dc/elements/1.1/modified
Source
UMLS 2025AB See more...
Submission date
March 22, 2026
Syntax
http://www.w3.org/ns/formats/Turtle
http://www.w3.org/ns/formats/Turtle
Version information
2025_04_10 See more...
uri
http://purl.bioontology.org/ontology/NCBITAXON/
http://purl.bioontology.org/ontology/NCBITAXON/
Submissions
Version Released Uploaded Downloads
2025_04_10 (Parsed, Indexed, Metrics, Annotator, Error Diff) 11/03/2025 03/22/2026 RDF/TTL | CSV | Diff
2024_10_23 (Archived) 05/06/2025 03/19/2026 RDF/TTL | Diff
NCBI2024_04_02 (Archived) 11/04/2024 01/16/2025 RDF/TTL | Diff
2024AA (Archived) 05/06/2024 08/28/2024 RDF/TTL | Diff
2023AB (Archived) 11/06/2023 01/31/2024 RDF/TTL | Diff
2023AA (Archived) 04/01/2023 08/07/2023 RDF/TTL | Diff
2022AB (Archived) 11/07/2022 01/06/2023 RDF/TTL | Diff
2022AA (Archived) 05/02/2022 06/15/2022 RDF/TTL | Diff
2021AB (Archived) 11/01/2021 12/06/2021 RDF/TTL
2021AA (Archived) 04/03/2021 12/06/2021 RDF/TTL
2020AB (Archived) 11/02/2020 01/06/2021 RDF/TTL
2020AA (Archived) 05/04/2018 09/24/2020 RDF/TTL
2019AB (Archived) 11/04/2019 11/18/2019 RDF/TTL
2019AA (Archived) 05/06/2019 08/27/2019 RDF/TTL
2018AB (Archived) 11/05/2018 04/29/2019 RDF/TTL
2018AA (Archived) 05/07/2018 07/06/2018 RDF/TTL
2017AB (Archived) 11/06/2017 07/06/2018 RDF/TTL
2017AA (Archived) 05/08/2017 04/06/2018 RDF/TTL
2016AB (Archived) 02/06/2017 02/06/2017 RDF/TTL
2016AA (Archived) 09/06/2016 09/06/2016 RDF/TTL
2015AB (Archived) 07/20/2016 07/20/2016 RDF/TTL
2015AA (Archived) 06/09/2015 06/09/2015 RDF/TTL
2015AA (Archived) 06/09/2015 06/09/2015 RDF/TTL
2014AB (Archived) 01/29/2015 01/29/2015 RDF/TTL
2014AA (Archived) 01/01/2014 08/28/2014 RDF/TTL
1.2 (Archived) 12/12/2011 07/11/2012 OWL
1.2 (Archived) 10/27/2008 05/13/2009 OBO
more...
Views of NCBITAXON
NeuroMorpho.Org Species Ontology v.1.0.0
A lighter version of the NCBI taxonomy that is customized for the NeuroMorpho.Org species.
NeuroMorpho.Org Species Ontology v.1.2.2
A lighter version of the NCBI taxonomy that is customized for the NeuroMorpho.Org species. The ontology also include NIFSTD, Rat strain and Jax mice terms that are arranged in a single parent hierarchical tree.
Metrics
Classes 761,814
Individuals 0
Properties 4
Maximum depth 38
Maximum number of children 1,603
Average number of children 5
Classes with a single child 68,501
Classes with more than 25 children 4,886
Classes with no definition 761,814
Visits
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The National Center for Biomedical Ontology was founded as one of the National Centers for Biomedical Computing, supported by the National Human Genome Research Institute, the National Heart Lung Blood Institute, and the NIH Common Fund under grant U54-HG004028. The resource is now supported in part by grant 5U24GM143402 from the National Institute of General Medical Sciences.
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