NMDC Ontology

Last uploaded: March 15, 2024
Preferred Name

soil
Synonyms

regolith

Definitions

An environmental material which is primarily composed of minerals, varying proportions of sand, silt, and clay, organic material such as humus, interstitial gases, liquids, and a broad range of resident micro- and macroorganisms. 'In engineering terms, soil is referred to as regolith, or loose rock material that lies above the 'solid geology'. Soil is commonly referred to as "earth" or "dirt"; technically, the term "dirt" should be restricted to displaced soil.' https://en.wikipedia.org/wiki/Soil " The upper limit of soil is the boundary between soil and air, shallow water, live plants, or plant materials that have not begun to decompose. Areas are not considered to have soil if the surface is permanently covered by water too deep (typically more than 2.5 meters) for the growth of rooted plants. The lower boundary that separates soil from the nonsoil underneath is most difficult to define. Soil consists of horizons near the Earth's surface that, in contrast to the underlying parent material, have been altered by the interactions of climate, relief, and living organisms over time. Commonly, soil grades at its lower boundary to hard rock or to earthy materials virtually devoid of animals, roots, or other marks of biological activity. For purposes of classification, the lower boundary of soil is arbitrarily set at 200 cm." Soil taxonomy, 2nd Ed., quoted in http://www.nrcs.usda.gov/wps/portal/nrcs/detail/soils/edu/?cid=nrcs142p2_054280

ID

http://purl.obolibrary.org/obo/ENVO_00001998

comment

'In engineering terms, soil is referred to as regolith, or loose rock material that lies above the 'solid geology'. Soil is commonly referred to as "earth" or "dirt"; technically, the term "dirt" should be restricted to displaced soil.' https://en.wikipedia.org/wiki/Soil " The upper limit of soil is the boundary between soil and air, shallow water, live plants, or plant materials that have not begun to decompose. Areas are not considered to have soil if the surface is permanently covered by water too deep (typically more than 2.5 meters) for the growth of rooted plants. The lower boundary that separates soil from the nonsoil underneath is most difficult to define. Soil consists of horizons near the Earth's surface that, in contrast to the underlying parent material, have been altered by the interactions of climate, relief, and living organisms over time. Commonly, soil grades at its lower boundary to hard rock or to earthy materials virtually devoid of animals, roots, or other marks of biological activity. For purposes of classification, the lower boundary of soil is arbitrarily set at 200 cm." Soil taxonomy, 2nd Ed., quoted in http://www.nrcs.usda.gov/wps/portal/nrcs/detail/soils/edu/?cid=nrcs142p2_054280

alternative term

regolith

database_cross_reference

https://en.wikipedia.org/wiki/Soil

SWEETRealm:Soil

LTER:535

SPIRE:Soil

definition

An environmental material which is primarily composed of minerals, varying proportions of sand, silt, and clay, organic material such as humus, interstitial gases, liquids, and a broad range of resident micro- and macroorganisms.

editor note

The various 'has part' and 'has quality' relations may not hold true for all soils; however, I have yet to find counter examples. Require input from a pedologist or similar. [pbuttigieg]

has characteristic

http://purl.obolibrary.org/obo/ENVO_06105304

http://purl.obolibrary.org/obo/PATO_0000984

has disposition

http://purl.obolibrary.org/obo/ENVO_06105304

has part

http://purl.obolibrary.org/obo/ENVO_01000017

http://purl.obolibrary.org/obo/ENVO_00002982

http://purl.obolibrary.org/obo/ENVO_01000256

http://purl.obolibrary.org/obo/ENVO_01000155

http://purl.obolibrary.org/obo/ENVO_01000016

has quality

http://purl.obolibrary.org/obo/PATO_0000984

has_broad_synonym

regolith

in_subset

http://purl.obolibrary.org/obo/envo#EnvO-Lite-GSC

label

soil

overlaps

http://purl.obolibrary.org/obo/ENVO_01000017

http://purl.obolibrary.org/obo/ENVO_00002982

http://purl.obolibrary.org/obo/ENVO_01000256

http://purl.obolibrary.org/obo/ENVO_01000155

http://purl.obolibrary.org/obo/ENVO_01000016

part_of

http://purl.obolibrary.org/obo/ENVO_01000820

prefixIRI

ENVO:00001998

prefLabel

soil

treeView

http://purl.obolibrary.org/obo/ENVO_01000820

subClassOf

http://purl.obolibrary.org/obo/ENVO_01000813

http://purl.obolibrary.org/obo/ENVO_00010483

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Delete Mapping To Ontology Source
http://purl.obolibrary.org/obo/ENVO_00001998 FOODON SAME_URI
http://purl.obolibrary.org/obo/ENVO_00001998 INBIO SAME_URI
http://purl.obolibrary.org/obo/ENVO_00001998 ENM SAME_URI
http://purl.obolibrary.org/obo/ENVO_00001998 PDRO SAME_URI
http://purl.obolibrary.org/obo/ENVO_00001998 EUPATH SAME_URI
http://purl.obolibrary.org/obo/ENVO_00001998 OBI SAME_URI
http://purl.obolibrary.org/obo/ENVO_00001998 ONE SAME_URI
http://purl.obolibrary.org/obo/ENVO_00001998 RBO SAME_URI
http://purl.obolibrary.org/obo/ENVO_00001998 OBI_BCGO SAME_URI
http://purl.obolibrary.org/obo/ENVO_00001998 AGRO SAME_URI
http://purl.obolibrary.org/obo/ENVO_00001998 EGO SAME_URI
http://purl.obolibrary.org/obo/ENVO_00001998 ENVO SAME_URI
http://purl.obolibrary.org/obo/ENVO_00001998 MONDO SAME_URI
http://purl.obolibrary.org/obo/ENVO_00001998 DPO SAME_URI
http://purl.obolibrary.org/obo/ENVO_00001998 BERO SAME_URI
http://purl.obolibrary.org/obo/ENVO_00001998 OBI_IEE SAME_URI
http://purl.obolibrary.org/obo/ENVO_00001998 PECO SAME_URI
http://purl.obolibrary.org/obo/ENVO_00001998 GENEPIO SAME_URI
http://purl.obolibrary.org/obo/ENVO_00001998 ECTO SAME_URI
http://purl.obolibrary.org/obo/ENVO_00001998 SLSO SAME_URI
http://purl.obolibrary.org/obo/ENVO_00001998 FNS-H SAME_URI
http://cerrado.linkeddata.es/ecology/ccon#Soil CCON LOOM
http://purl.jp/bio/10/gmo/GMO_001941 GMO LOOM
https://w3id.org/mixs/vocab/PlantGrowthMedEnum#soil MIXS LOOM
http://www.semanticweb.org/mca/ontologies/2018/8/untitled-ontology-47#Soil IBD LOOM
http://www.semanticweb.org/mca/ontologies/2018/8/untitled-ontology-47#Soil IBIO LOOM
http://www.semanticweb.org/mca/ontologies/2018/8/untitled-ontology-47#Soil INBIODIV LOOM
http://www.semanticweb.org/mca/ontologies/2018/8/untitled-ontology-47#Soil RDO LOOM
http://www.owl-ontologies.com/BiodiversityOntologyFull.owl#Soil BOF LOOM
http://purl.obolibrary.org/obo/BTO_0003809 BTO LOOM
http://purl.obolibrary.org/obo/OMIT_0013874 OMIT LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#11513 OCHV LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#N06.230.600 RH-MESH LOOM
http://www.phoc.org.cn/pmo/class/PMO_00024235 PMAPP-PMO LOOM
http://purl.jp/bio/11/meo/MEO_0000007 MEO LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0037592 OCHV LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#G01.311.820 RH-MESH LOOM
https://purl.dsmz.de/schema/Soil D3O LOOM
http://purl.org/m4m/1342 GFF-M4M LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D20.721 RH-MESH LOOM
https://w3id.org/gold.vocab/Soil GOLDTERMS LOOM
http://purl.obolibrary.org/obo/MESH_D012987 BERO LOOM
http://purl.obolibrary.org/obo/envo#Soil PDO_CAS LOOM
http://purl.obolibrary.org/obo/ECOSIMCONCEPT_Soil ECOSIM LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#G16.500.275.815 RH-MESH LOOM
http://sweetontology.net/matrSediment/Soil SWEET LOOM
http://purl.bioontology.org/ontology/LNC/LA30105-3 LOINC LOOM
http://vocabs.lter-europe.net/elter_cl/10051 ELTER_CL LOOM
http://www.projecthalo.com/aura#Soil AURA LOOM
http://purl.bioontology.org/ontology/SNOMEDCT/415555003 SNOMEDCT LOOM
http://purl.jp/bio/4/id/200906056681373529 IOBC LOOM
http://purl.bioontology.org/ontology/CSP/2733-0816 CRISP LOOM
http://purl.obolibrary.org/obo/MVC_0000469 MIXSCV LOOM
http://purl.bioontology.org/ontology/MESH/D012987 MESH LOOM
http://purl.org/zonmw/id-amr/10042 ID-AMR LOOM
https://www.infrarisk-fp7.eu/vocabs/#Soil INFRARISK LOOM
http://www.semanticweb.org/ontologies/2010/5/22/Ontology1277229984000.owl#HPI:0000033 HPIO LOOM
https://w3id.org/mixs/vocab/Soil MIXS LOOM
http://purl.obolibrary.org/obo/ENVO_00001998 FOODON LOOM
http://purl.obolibrary.org/obo/ENVO_00001998 INBIO LOOM
http://purl.obolibrary.org/obo/ENVO_00001998 ENM LOOM
http://purl.obolibrary.org/obo/ENVO_00001998 PDRO LOOM
http://purl.obolibrary.org/obo/ENVO_00001998 EUPATH LOOM
http://purl.obolibrary.org/obo/ENVO_00001998 OBI LOOM
http://purl.obolibrary.org/obo/ENVO_00001998 ONE LOOM
http://purl.obolibrary.org/obo/ENVO_00001998 RBO LOOM
http://purl.obolibrary.org/obo/ENVO_00001998 OBI_BCGO LOOM
http://purl.obolibrary.org/obo/ENVO_00001998 AGRO LOOM
http://purl.obolibrary.org/obo/ENVO_00001998 EGO LOOM
http://purl.obolibrary.org/obo/ENVO_00001998 ENVO LOOM
http://purl.obolibrary.org/obo/ENVO_00001998 DPO LOOM
http://purl.obolibrary.org/obo/ENVO_00001998 BERO LOOM
http://purl.obolibrary.org/obo/ENVO_00001998 OBI_IEE LOOM
http://purl.obolibrary.org/obo/ENVO_00001998 PECO LOOM
http://purl.obolibrary.org/obo/ENVO_00001998 GENEPIO LOOM
http://purl.obolibrary.org/obo/ENVO_00001998 ECTO LOOM
http://purl.obolibrary.org/obo/ENVO_00001998 SLSO LOOM
http://purl.obolibrary.org/obo/ENVO_00001998 FNS-H LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D012987 RH-MESH LOOM