Ontology of Adverse Events

Last uploaded: September 3, 2022
Preferred Name

cell death

Synonyms

accidental cell death

necrosis

Definitions

This term should not be used for direct annotation. The only exception should be when experimental data (e.g., staining with trypan blue or propidium iodide) show that cell death has occurred, but fail to provide details on death modality (accidental versus programmed). When information is provided on the cell death mechanism, annotations should be made to the appropriate descendant of 'cell death' (such as, but not limited to, GO:0097300 'programmed necrotic cell death' or GO:0006915 'apoptotic process'). Also, if experimental data suggest that a gene product influences cell death indirectly, rather than being involved in the death process directly, consider annotating to a 'regulation' term. Any biological process that results in permanent cessation of all vital functions of a cell. A cell should be considered dead when any one of the following molecular or morphological criteria is met: (1) the cell has lost the integrity of its plasma membrane; (2) the cell, including its nucleus, has undergone complete fragmentation into discrete bodies (frequently referred to as "apoptotic bodies"); and/or (3) its corpse (or its fragments) have been engulfed by an adjacent cell in vivo.

ID

http://purl.obolibrary.org/obo/GO_0008219

comment

This term should not be used for direct annotation. The only exception should be when experimental data (e.g., staining with trypan blue or propidium iodide) show that cell death has occurred, but fail to provide details on death modality (accidental versus programmed). When information is provided on the cell death mechanism, annotations should be made to the appropriate descendant of 'cell death' (such as, but not limited to, GO:0097300 'programmed necrotic cell death' or GO:0006915 'apoptotic process'). Also, if experimental data suggest that a gene product influences cell death indirectly, rather than being involved in the death process directly, consider annotating to a 'regulation' term.

definition

Any biological process that results in permanent cessation of all vital functions of a cell. A cell should be considered dead when any one of the following molecular or morphological criteria is met: (1) the cell has lost the integrity of its plasma membrane; (2) the cell, including its nucleus, has undergone complete fragmentation into discrete bodies (frequently referred to as "apoptotic bodies"); and/or (3) its corpse (or its fragments) have been engulfed by an adjacent cell in vivo.

has_obo_namespace

biological_process

has_related_synonym

accidental cell death

necrosis

id

GO:0008219

imported from

http://purl.obolibrary.org/obo/go.owl

in_subset

http://purl.obolibrary.org/obo/go#goslim_generic

http://purl.obolibrary.org/obo/go#goslim_plant

http://purl.obolibrary.org/obo/go#gosubset_prok

label

cell death

notation

GO:0008219

prefLabel

cell death

subClassOf

http://purl.obolibrary.org/obo/GO_0044763

http://purl.obolibrary.org/obo/GO_0016265

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