Human Reference Atlas

Last uploaded: June 14, 2024
Preferred Name

colon
Synonyms

posterior intestine

hindgut

large bowel

Definitions

A portion of the large intestine before it becomes the rectum. In mammals, the colon is the most part of the large intestine, excluding the vermiform appendix, the rectum and the anal canal.

ID

http://purl.obolibrary.org/obo/UBERON_0001155

altLabel

posterior intestine

hindgut

large bowel

definition

A portion of the large intestine before it becomes the rectum. In mammals, the colon is the most part of the large intestine, excluding the vermiform appendix, the rectum and the anal canal.

editor note

Some references do not consider the caecum to be part of the colon.

TODO - abstract this such that it legitimately covers all vertebrates

external_definition

The last portion of the digestive system, it extracts water and salt from solid wastes before they are eliminated from the body.[AAO]

The posterior intestine has short longitudinally arranged epithelial folds which are similar to the colon of higher vertebrates. Wallace et al, 2005.[TAO]

function_notes

it extracts water and salt from solid wastes before they are eliminated from the body[WP]

has exact synonym

large bowel

has narrow synonym

posterior intestine

has related synonym

hindgut

has_obo_namespace

uberon

has_relational_adjective

colonic

homology_notes

Although all vertebrates have a digestive tract and accessory glands, various parts of this system are not necessarily homologous, analogous, or even present in all species. Therefore, broad comparisons can be best made under the listings of headgut, foregut, midgut, pancreas and biliary system, hindgut.[uncertain][VHOG]

id

UBERON:0001155

in_subset

http://purl.obolibrary.org/obo/uberon/core#efo_slim

http://purl.obolibrary.org/obo/uberon/core#vertebrate_core

http://purl.obolibrary.org/obo/uberon/core#pheno_slim

http://purl.obolibrary.org/obo/uberon/core#uberon_slim

label

colon

notation

UBERON:0001155

part_of

http://purl.obolibrary.org/obo/UBERON_0000059

prefLabel

colon

taxon_notes

In mammals, the colon consists of four sections: the ascending colon, the transverse colon, the descending colon, and the sigmoid colon[WP]

In zebrafish, the posterior intestine has short longitudinally arranged epithelial folds which are similar to the colon of higher vertebrates[ZFIN]

treeView

http://purl.obolibrary.org/obo/UBERON_0000059

xRef

AAO:0010400

TAO:0000706

CALOHA:TS-0158

galen:Colon

EV:0100079

ZFA:0000706

FMA:14543

MAT:0000526

MAP:0000001

MESH:D003106

Wikipedia:Colon_(anatomy)

EMAPA:18939

SCTID:302508007

GAID:309

VHOG:0000648

XAO:0000243

MA:0000335

BTO:0000269

UMLS:C0009368

NCIT:C12382

EFO:0000361

subClassOf

http://purl.obolibrary.org/obo/UBERON_0004921

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Delete Mapping To Ontology Source
http://purl.obolibrary.org/obo/UBERON_0001155 CL SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001155 FOODON SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001155 NPOKB SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001155 OAE SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001155 PDRO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001155 UBERON SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001155 CLO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001155 OBI SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001155 INBANCIDO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001155 OHPI SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001155 GCBO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001155 CCONT SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001155 FOVT SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001155 HOIP SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001155 ONE SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001155 RBO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001155 OBI_BCGO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001155 EFO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001155 ORCS SAME_URI
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http://purl.obolibrary.org/obo/UBERON_0001155 HSO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001155 PCL SAME_URI
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http://purl.obolibrary.org/obo/MAT_0000526 MAT LOOM
http://www.semanticweb.org/admin/ontologies/2023/4/OMDO#Colon OMDO LOOM
http://purl.org/sig/ont/fma/fma14543 FMA LOOM
http://purl.org/sig/ont/fma/fma14543 ROO LOOM
http://purl.bioontology.org/ontology/VANDF/4028574 VANDF LOOM
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http://www.ifomis.org/acgt/1.0#Colon ACGT-MO LOOM
http://purl.bioontology.org/ontology/LNC/MTHU003023 LOINC LOOM
http://sig.uw.edu/fma#Colon HUPSON LOOM
http://purl.obolibrary.org/obo/GAZ_00002897 GAZ LOOM
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http://sbmi.uth.tmc.edu/ontology/ochv#C0009368 OCHV LOOM
http://doe-generated-ontology.com/OntoPneumo#Colon ONTOPNEUMO LOOM
http://purl.bioontology.org/ontology/MESH/D003106 MESH LOOM
http://purl.bioontology.org/ontology/LNC/LP200389-7 LOINC LOOM
http://www.semanticweb.org/ontologies/2010/10/BPO.owl#colon BHO LOOM
http://purl.obolibrary.org/obo/XAO_0000243 XPO LOOM
http://purl.obolibrary.org/obo/XAO_0000243 XAO LOOM
http://www.bioontology.org/pma.owl#PMA_690 PMA LOOM
http://purl.obolibrary.org/obo/OMIT_0004415 OMIT LOOM
http://purl.bioontology.org/ontology/RCD/Xa8SK RCD LOOM
http://purl.obolibrary.org/obo/NCIT_C12382 BERO LOOM
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http://purl.obolibrary.org/obo/MA_0000335 MA LOOM
http://purl.obolibrary.org/obo/BTO_0000269 ENM LOOM
http://purl.obolibrary.org/obo/BTO_0000269 DTO LOOM
http://purl.obolibrary.org/obo/BTO_0000269 BTO LOOM
http://purl.jp/bio/4/id/200906050042243624 IOBC LOOM
https://w3id.org/gold.vocab/Colon GOLDTERMS LOOM
http://purl.jp/bio/11/meo/MEO_0000462 MEO LOOM
http://purl.bioontology.org/ontology/CSP/1250-4363 CRISP LOOM
http://purl.bioontology.org/ontology/LNC/LP7151-6 LOINC LOOM
http://localhost/plosthes.2017-1#2494 PLOSTHES LOOM
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http://www.co-ode.org/ontologies/galen#Colon GALEN LOOM
http://radlex.org/RID/RID31011 RADLEX LOOM
http://www.semanticweb.org/hanfei/ontologies/2020/9/untitled-ontology-1306#Colon COVID-19-ONT-PM LOOM
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http://phenomebrowser.net/ontologies/mesh/mesh.owl#D003106 RH-MESH LOOM
urn:absolute:RadiationOncologyStructuresOntology#Colon ROS LOOM
http://purl.bioontology.org/ontology/NCBITAXON/1542223 NCBITAXON LOOM
http://www.projecthalo.com/aura#Colon AURA LOOM