Cell Culture Ontology

Last uploaded: July 23, 2014
Preferred Name

stomach
Synonyms

stomach chamber

anterior intestine

ventriculus

gaster

mesenteron

Definitions

An expanded region of the vertebrate alimentary tract that serves as a food storage compartment and digestive organ. A stomach is lined, in whole or in part by a glandular epithelium.

ID

http://purl.obolibrary.org/obo/UBERON_0000945

database_cross_reference

Wikipedia:Stomach

CALOHA:TS-0980

EMAPA:17021

MIAA:0000051

NCIT:C12391

UMLS:C0038351

AAO:0000579

TAO:0002121

MAT:0000051

MESH:D013270

XAO:0000128

galen:Stomach

EFO:0000837

BTO:0001307

EHDAA2:0001915

SCTID:181246003

VHOG:0000408

ANISEED:1235297

EHDAA:2993

EV:0100070

FMA:7148

GAID:293

MA:0000353

definition

An expanded region of the vertebrate alimentary tract that serves as a food storage compartment and digestive organ. A stomach is lined, in whole or in part by a glandular epithelium.

depiction

https://upload.wikimedia.org/wikipedia/commons/e/e0/Stomach_diagram.svg

external_definition

Portion of alimentary canal with increased circular and longitudinal smooth muscle. Bounded posteriorly by the pyloric sphincter. Mucosal lining has increased folding.[AAO]

has_narrow_synonym

stomach chamber

has_obo_namespace

uberon

has_related_synonym

anterior intestine

ventriculus

gaster

mesenteron

homology_notes

It appears that the stomach has an ancient origin. The stomach first appears in the fish lineage. The prevertebrate chordates do not have a true stomach, whereas the cartilaginous and bony fish do. Although most fish do have a true stomach, some fish species appear to have lost the stomach secondarily. The remaining vertebrate lineages do have a true stomach (at least in the adult animal), although there is great variation in the size and shape of the stomach.[well established][VHOG]

id

UBERON:0000945

in_subset

http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas

http://purl.obolibrary.org/obo/uberon/core#efo_slim

http://purl.obolibrary.org/obo/uberon/core#organ_slim

http://purl.obolibrary.org/obo/uberon/core#vertebrate_core

http://purl.obolibrary.org/obo/uberon/core#major_organ

http://purl.obolibrary.org/obo/uberon/core#pheno_slim

http://purl.obolibrary.org/obo/uberon/core#uberon_slim

label

stomach

never_in_taxon

http://purl.obolibrary.org/obo/NCBITaxon_7878

http://purl.obolibrary.org/obo/NCBITaxon_7864

http://purl.obolibrary.org/obo/NCBITaxon_7955

http://purl.obolibrary.org/obo/NCBITaxon_9259

notation

UBERON:0000945

part_of

http://purl.obolibrary.org/obo/UBERON_0001555

http://purl.obolibrary.org/obo/UBERON_0000467

http://purl.obolibrary.org/obo/UBERON_0001007

http://purl.obolibrary.org/obo/UBERON_0005409

preferred label

stomach

prefLabel

stomach

RO_0002175

http://purl.obolibrary.org/obo/NCBITaxon_9606

taxon_notes

We restrict this to the vertebrate specific structure - see the grouping class 'food storage organ' for analogous structures in other species. Teleosts: Zebrafish is functionally stomach-less, but may retain ontogenic footprint. Although the precise shape and size of the stomach varies widely among different vertebrates, the relative positions of the oesophageal and duodenal openings remain relatively constant. As a result, the organ always curves somewhat to the left before curving back to meet the pyloric sphincter. However, lampreys, hagfishes, chimaeras, lungfishes, and some teleost fish have no stomach at all, with the oesophagus opening directly into the intestine. The gastric lining is usually divided into two regions, an anterior portion lined by fundic glands, and a posterior with pyloric glands. Cardiac glands are unique to mammals, and even then are absent in a number of species. The distributions of these glands vary between species, and do not always correspond with the same regions as in man. Furthermore, in many non-human mammals, a portion of the stomach anterior to the cardiac glands is lined with epithelium essentially identical to that of the oesophagus. Ruminants, in particular, have a complex stomach, the first three chambers of which are all lined with oesophageal mucosa

treeView

http://purl.obolibrary.org/obo/UBERON_0001555

http://purl.obolibrary.org/obo/UBERON_0000467

http://purl.obolibrary.org/obo/UBERON_0001007

http://purl.obolibrary.org/obo/UBERON_0005409

subClassOf

http://purl.obolibrary.org/obo/UBERON_0000061

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Delete Mapping To Ontology Source
http://purl.obolibrary.org/obo/UBERON_0000945 FOODON SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 NPOKB SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 CL SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 OAE SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 PDRO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 UBERON SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 EUPATH SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 CLO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 OBI SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 INBANCIDO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 OHPI SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 GCBO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 FOVT SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 OCMR SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 HOIP SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 ONE SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 DTO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 RBO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 OBI_BCGO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 XPO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 ORCS SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 DOID SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 HSO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 PCL SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 MONDO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 PATO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 PATO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 BAO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 NIFDYS SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 OBIB SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 GO-PLUS SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 BERO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 CEPH SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 ONS SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 EFO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 NBO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 HHEAR SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 DDSS SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 TXPO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 ODAE SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 HRA SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 ICDO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 CIDO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 UPHENO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 OBI_IEE SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 OCVDAE SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 NIFSTD SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 ICO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 ECAO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 KTAO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 GENEPIO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 OHMI SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 MAXO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 VO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 FNS-H SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 AISM SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 NMDCO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000945 OBA SAME_URI
http://purl.obolibrary.org/obo/EHDA_9154 EHDA LOOM
http://purl.obolibrary.org/obo/OMIT_0014145 OMIT LOOM
http://purl.obolibrary.org/obo/EHDA_10293 EHDA LOOM
http://purl.bioontology.org/ontology/MESH/D013270 MESH LOOM
http://purl.obolibrary.org/obo/PhmammA_0000737 PHMAMMADO LOOM
http://purl.bioontology.org/ontology/RCD/7N301 RCD LOOM
http://localhost/plosthes.2017-1#9980 PLOSTHES LOOM
http://purl.bioontology.org/ontology/LNC/MTHU003059 LOINC LOOM
http://purl.obolibrary.org/obo/EHDA_5799 EHDA LOOM
http://purl.obolibrary.org/obo/CisaviA_0000737 CISAVIADO LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C12391 NCIT LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C12391 SEPON LOOM
http://purl.obolibrary.org/obo/EHDA_2994 EHDA LOOM
http://purl.obolibrary.org/obo/HaroreA_0000737 HAROREADO LOOM
http://scai.fraunhofer.de/CSEO#Stomach CSEO LOOM
http://purl.obolibrary.org/obo/MFO_0003120 MFO LOOM
http://purl.jp/bio/11/meo/MEO_0000482 MEO LOOM
http://purl.bioontology.org/ontology/MSTDE/MT010010 MSTDE LOOM
http://www.semanticweb.org/ontologies/2010/10/BPO.owl#stomach BHO LOOM
http://purl.obolibrary.org/obo/MooccuA_0000737 MOOCCUADO LOOM
http://ecoinformatics.org/oboe/oboe.1.0/oboe-anatomy.owl#Stomach OBOE-SBC LOOM
http://www.projecthalo.com/aura#Stomach AURA LOOM
http://purl.obolibrary.org/obo/MoocciA_0000737 MOOCCIADO LOOM
http://radlex.org/RID/RID114 RADLEX LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D013270 RH-MESH LOOM
http://purl.obolibrary.org/obo/MA_0000353 MA LOOM
http://purl.obolibrary.org/obo/MooculA_0000737 MOOCULADO LOOM
http://purl.obolibrary.org/obo/EHDA_3888 EHDA LOOM
http://purl.obolibrary.org/obo/EHDA_6872 EHDA LOOM
http://purl.obolibrary.org/obo/NCIT_C12391 BERO LOOM
http://purl.obolibrary.org/obo/ZFA_0000437 ZFA LOOM
http://purl.obolibrary.org/obo/FMA_7148 MELO LOOM
http://purl.jp/bio/4/id/200906037874950464 IOBC LOOM
http://purl.obolibrary.org/obo/EHDAA_2993 EHDAA LOOM
http://purl.obolibrary.org/obo/BSA_0000123 BSAO LOOM
http://purl.obolibrary.org/obo/MAT_0000051 MAT LOOM
http://doe-generated-ontology.com/OntoPneumo#Estomac ONTOPNEUMO LOOM
http://www.co-ode.org/ontologies/galen#Stomach GALEN LOOM
http://purl.obolibrary.org/obo/HaauraA_0000737 HAAURAADO LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#11737 OCHV LOOM
https://github.com/sap218/coid/blob/master/coid.owl#COID_00567 COID LOOM
https://w3id.org/gold.vocab/Stomach GOLDTERMS LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0038351 OCHV LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 FOODON LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 NPOKB LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 CL LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 OAE LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 PDRO LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 UBERON LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 EUPATH LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 CLO LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 OBI LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 INBANCIDO LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 GCBO LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 FOVT LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 OCMR LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 HOIP LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 ONE LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 DTO LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 RBO LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 OBI_BCGO LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 XPO LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 ORCS LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 DOID LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 HSO LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 PCL LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 PATO LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 PATO LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 BAO LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 NIFDYS LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 OBIB LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 GO-PLUS LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 CEPH LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 ONS LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 EFO LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 NBO LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 HHEAR LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 DDSS LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 TXPO LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 ODAE LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 HRA LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 ICDO LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 CIDO LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 UPHENO LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 OBI_IEE LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 OCVDAE LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 NIFSTD LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 ICO LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 ECAO LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 KTAO LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 GENEPIO LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 OHMI LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 MAXO LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 VO LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 FNS-H LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 AISM LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 NMDCO LOOM
http://purl.obolibrary.org/obo/UBERON_0000945 OBA LOOM
http://purl.obolibrary.org/obo/VHOG_0000408 VHOG LOOM
urn:absolute:RadiationOncologyStructuresOntology#Stomach ROS LOOM
http://id.nlm.nih.gov/mesh/D013270 MDM LOOM
http://purl.obolibrary.org/obo/TAO_0002121 TAO LOOM
http://purl.bioontology.org/ontology/LNC/LP7605-1 LOINC LOOM
http://purl.obolibrary.org/obo/BTO_0001307 DTO LOOM
http://purl.obolibrary.org/obo/BTO_0001307 BTO LOOM
http://www.bioontology.org/pma.owl#PMA_682 PMA LOOM
http://purl.bioontology.org/ontology/LNC/LP213585-5 LOINC LOOM
http://www.limics.fr/ontologies/ontoparonmed#Estomac ONTOPARON LOOM
http://purl.obolibrary.org/obo/EHDA_7917 EHDA LOOM
http://ontology.apa.org/apaonto/termsonlyOUT%20(5).owl#Stomach APAONTO LOOM
http://sig.uw.edu/fma#Stomach HUPSON LOOM
http://purl.org/sig/ont/fma/fma7148 FMA LOOM
http://purl.org/sig/ont/fma/fma7148 ROO LOOM
http://purl.obolibrary.org/obo/EHDAA2_0001915 EHDAA2 LOOM
http://purl.obolibrary.org/obo/EHDA_4843 EHDA LOOM
http://purl.obolibrary.org/obo/CiinteA_0000737 CIINTEADO LOOM
http://bioportal.bioontology.org/ontologies/FISHO#FISHO_0000308 FISHO LOOM
http://purl.bioontology.org/ontology/CSP/1250-7954 CRISP LOOM
http://www.semanticweb.org/ontologies/2012/11/abnormalities.owl#phenodb:1046 IFAR LOOM
http://purl.obolibrary.org/obo/ECAO_0112180 ECAO LOOM
http://www.semanticweb.org/david/ontologies/2013/0/pathLex.owl#1.3.6.1.4.1.19376.1.8.2.1.803 PATHLEX LOOM
http://purl.obolibrary.org/obo/PhfumiA_0000737 PHFUMIADO LOOM
http://purl.obolibrary.org/obo/EMAPA_17021 EMAPA LOOM
http://purl.bioontology.org/ontology/LNC/LA4476-3 LOINC LOOM
http://purl.org/obo/owlapi/fma#FMA_7148 BIOMODELS LOOM
http://www.semanticweb.org/EpilepsySemiologyOntology#stomach ESO_C LOOM
http://www.cea.fr/ontotoxnuc#Estomac ONTOTOXNUC LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#A03.556.875.875 RH-MESH LOOM
http://purl.obolibrary.org/obo/XAO_0000128 XPO LOOM
http://purl.obolibrary.org/obo/XAO_0000128 XAO LOOM
http://www.icn.ch/icnp#Stomach ICNP LOOM
http://purl.bioontology.org/ontology/LNC/LP212492-5 LOINC LOOM
http://www.semanticweb.org/admin/ontologies/2023/4/OMDO#Stomach OMDO LOOM