Ontology of Adverse Events

Last uploaded: September 3, 2022
Preferred Name

midbrain
Synonyms

mesencephalon

MB

Definitions

The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles)[GO].

ID

http://purl.obolibrary.org/obo/UBERON_0001891

contributes to morphology of

http://purl.obolibrary.org/obo/UBERON_0000955

database_cross_reference

http://www.snomedbrowser.com/Codes/Details/279099009

http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=462

http://uri.neuinfo.org/nif/nifstd/birnlex_1667

http://linkedlifedata.com/resource/umls/id/C0025462

http://en.wikipedia.org/wiki/Midbrain

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C12510

AAO:0010149

VHOG:0000069

TAO:0000128

DMBA:16649

HBA:9001

MIAA:0000106

BTO:0000138

EHDAA:3694

BAMS:MES

RETIRED_EHDAA2:0001104

EFO:0000919

FMA:61993

MBA:313

CALOHA:TS-0630

MESH:D008636

EHDAA2:0001162

OpenCyc:Mx4rvsBUqpwpEbGdrcN5Y29ycA

XAO:0000014

MAT:0000106

ZFA:0000128

http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=462

EV:0100242

MA:0000207

DHBA:10648

EMAPA:16974

BM:MB

UMLS:C0025462

definition

The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles)[GO].

depicted_by

http://upload.wikimedia.org/wikipedia/commons/f/f9/Human_brain_inferior_view_description.JPG

editor note

developmental relationships need revised

external_definition

The brain region between the forebrain anteriorly and the hindbrain posteriorly, including the tectum dorsally and the midbrain tegmentum ventrally. Kimmel et al, 1995.[TAO]

Middle part of the brain composed of the optic tectum and penducular region.[AAO]

external_ontology_notes

part of brainstem in ABA - we reject this in favor of ISBN10:0471888893 which has an implicit overlaps relationships

has developmental contribution from

http://purl.obolibrary.org/obo/UBERON_0003849

http://purl.obolibrary.org/obo/UBERON_0009616

has_broad_synonym

MB

has_obo_namespace

uberon

has_related_synonym

mesencephalon

has_relational_adjective

mesencephalic

homology_notes

Fine structural, computerized three-dimensional (3D) mapping of cell connectivity in the amphioxus nervous system and comparative molecular genetic studies of amphioxus and tunicates have provided recent insights into the phylogenetic origin of the vertebrate nervous system. The results suggest that several of the genetic mechanisms for establishing and patterning the vertebrate nervous system already operated in the ancestral chordate and that the nerve cord of the proximate invertebrate ancestor of the vertebrates included a diencephalon, midbrain, hindbrain, and spinal cord.[well established][VHOG]

id

UBERON:0001891

immediate transformation of

http://purl.obolibrary.org/obo/UBERON_0009616

imported from

http://purl.obolibrary.org/obo/uberon.owl

in_subset

http://purl.obolibrary.org/obo/uberon#uberon_slim

http://purl.obolibrary.org/obo/uberon/core#efo_slim

http://purl.obolibrary.org/obo/uberon/core#vertebrate_core

http://purl.obolibrary.org/obo/uberon#vertebrate_core

http://purl.obolibrary.org/obo/uberon/core#pheno_slim

http://purl.obolibrary.org/obo/uberon/core#uberon_slim

label

midbrain

notation

UBERON:0001891

part_of

http://purl.obolibrary.org/obo/UBERON_0000955

prefLabel

midbrain

transformation of

http://purl.obolibrary.org/obo/UBERON_0009616

treeView

http://purl.obolibrary.org/obo/UBERON_0000955

spatially_disjoint_from

http://purl.obolibrary.org/obo/UBERON_0002028

http://purl.obolibrary.org/obo/UBERON_0001894

subClassOf

http://purl.obolibrary.org/obo/UBERON_0002616

http://purl.obolibrary.org/obo/UBERON_0010314

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Delete Mapping To Ontology Source
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http://purl.obolibrary.org/obo/XAO_0000014 XPO LOOM
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