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Suggested Ontology for Pharmacogenomics
Last uploaded:
March 2, 2017
| Acronym | SOPHARM |
| Visibility | Public |
| Description | SO-Pharm (Suggested Ontology for Pharmacogenomics) is a domain ontology implemented in OWL-DL, which proposes a formal description of pharmacogenomic knowledge. SO-Pharm articulates different ontologies that represent complementary sub-domains of pharmacogenomics, i.e. related to genotype, phenotype, drugs, and clinical trials. SO-Pharm enables to represent pharmacogenomic relationships between a drug, a genomic variation and a phenotype trait. In addition, it enables to represent patient and more largely panel included in trials, and populations. SO-Pharm enables the representation of measured items on this patients such as results from the observation of a phenotype trait or of genomic variations. SO-Pharm supports knowledge about pharmacogenomic hypothesis, case study, and investigations in pharmacogenomics. SO-Pharm is designed to facilitate data integration and knowledge discovery in pharmacogenomics. In addition it provides a consistent articulation of ontologies of pharmacogenomic sub-domains. |
| Status | Beta |
| Format | OWL |
| Categories |
| Contact | Adrien Coulet ([email protected]) |
| Creation date | March 2, 2017
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| Root of obsolete branch |
http://www.geneontology.org/formats/oboInOwl#ObsoleteClass
http://www.geneontology.org/formats/oboInOwl#ObsoleteClass
|
| Submission date | March 2, 2017
|
| Version information |
Version: SO-Pharm 2.2
Release: 02 Mar 2017
See more...
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| Version | Released | Uploaded | Downloads |
|---|---|---|---|
| Version: SO-Pharm 2.2 Release: 02 Mar 2017 (Parsed, Indexed, Metrics, Annotator, Error Diff) | 03/02/2017 | 03/02/2017 | OWL | CSV | RDF/XML |
| Author: Adrien CouletVersion: SO-Pharm 2.0 (alpha version)Release: 09/19/2007Contact: adrien dot coulet at loria dot frUniversity of Nancy (Archived) | 03/01/2017 | 03/01/2017 | OWL | Diff |
| Author: Adrien CouletVersion: SO-Pharm 2.0 (alpha version)Release: 09/19/2007Contact: adrien dot coulet at loria dot frUniversity of Nancy (Archived) | 02/28/2017 | 02/28/2017 | OWL | Diff |
| Author: Adrien CouletVersion: SO-Pharm 2.0 (alpha version)Release: 09/19/2007Contact: adrien dot coulet at loria dot frUniversity of Nancy (Archived) | 02/24/2017 | 02/24/2017 | OWL | Diff |
| Author: Adrien Coulet Version: SO-Pharm 2.0 (alpha version) Release: 09/19/2007 Contact: adrien dot coulet at loria dot fr University of Nancy (Archived) | 02/23/2017 | 02/23/2017 | OWL | Diff |
| Author: Adrien Coulet Version: SO-Pharm 2.0 (alpha version) Release: 09/19/2007 Contact: adrien dot coulet at loria dot fr University of Nancy (Archived) | 01/26/2017 | 01/26/2017 | OWL | Diff |
| Author: Adrien Coulet Version: SO-Pharm 2.0 (alpha version) Release: 09/19/2007 Contact: adrien dot coulet at loria dot fr University of Nancy (Archived) | 01/11/2017 | 01/11/2017 | OWL | Diff |
| Author: Adrien Coulet Version: SO-Pharm 2.0 (alpha version) Release: 09/19/2007 Contact: adrien dot coulet at loria dot fr University of Nancy (Archived) | 10/06/2016 | 10/06/2016 | OWL | Diff |
| Author: Adrien Coulet Version: SO-Pharm 2.0 (alpha version) Release: 09/19/2007 Contact: adrien dot coulet at loria dot fr University of Nancy (Archived) | 08/20/2015 | 08/20/2015 | OWL | Diff |
| Author: Adrien CouletVersion: SO-Pharm 2.1Release: 01/15/2009Contact: adrien dot coulet at loria dot frUniversity of Nancy (Archived) | 08/20/2015 | 02/06/2009 | OWL | Diff |
| 2.1.2 (Archived) | 01/21/2009 | 01/21/2009 | OWL |
| 2.1 (Archived) | 11/26/2008 | 11/26/2008 | OWL |
| 2.0 alpha (Archived) | 08/21/2007 | 08/22/2007 | OWL |
| more... | |||
No views of SOPHARM available
| Classes | 117 |
| Individuals | 17 |
| Properties | 61 |
| Maximum depth | 4 |
| Maximum number of children | 51 |
| Average number of children | 2 |
| Classes with a single child | 26 |
| Classes with more than 25 children | 1 |
| Classes with no definition | 47 |