Annotator

Get annotations for biomedical text with classes from the ontologies

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Annotations

Class filter	Ontology filter	Type filter	UMLS Sem Type	Context	Matched Class filter	Matched Ontology filter

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Additional parameters are documented at Annotator Web Service

	Bibliographic Materials Group (BIBLIO)
	Biodiversity Information Standards (BIS)
	Cancer Biomedical Informatics Grid (caBIG)
	Clinical and Translational Science Awards (CTSA)
	Consultative Group on International Agricultural Research (CGIAR)
	OBO Foundry (OBO_Foundry)
	Proteomics Standards Initiative (PSI)
	Unified Medical Language System (UMLS)
	WHO Family of International Classifications (WHO-FIC)

	All Organisms
	Anatomy
	Animal Development
	Animal Gross Anatomy
	Arabidopsis
	Biological Process
	Biomedical Resources
	Cell
	Cellular anatomy
	Chemical
	Development
	Dysfunction
	Ethology
	Experimental Conditions
	Fish Anatomy
	Gene Product
	Genomic and Proteomic
	Gross Anatomy
	Health
	Human
	Human Developmental Anatomy
	Imaging
	Immunology
	Microbial Anatomy
	Molecule
	Mouse Anatomy
	Neurologic Disease
	Neurological Disorder
	Other
	Phenotype
	Physicochemical
	Plant
	Plant Anatomy
	Plant Development
	Protein
	Subcellular
	Subcellular anatomy
	Taxonomic Classification
	Upper Level Ontology
	Vocabularies
	Yeast

	Select all filtered ontologies (show all)
	A formal representation of the knowledge within the domain of Isotopes for Food Science (ISO-FOOD)
	AdaLab ontology (ADALAB)
	AdaLab-meta ontology (ADALAB-META)
	Adverse Childhood Experiences Ontology (ACESO)
	Adverse Event by System Organ Class (AESOC)
	Adverse Event Reporting Ontology (AERO)
	adverse event repoting system (AERS)
	AGRonomy Ontology (AGRO)
	alexandre (QUITOPLAN)
	Allen Brain Atlas (ABA) Adult Mouse Brain Ontology (ABA-AMB)
	Allergy Detector II (ALLERGYDETECTOR)
	Alzheimer Disease Map Ontology (ADMO)
	Alzheimer's disease ontology (ADO)
	Amino Acid Ontology (AMINO-ACID)
	Amphibian Gross Anatomy Ontology (AAO)
	Amphibian Taxonomy Ontology (ATO)
	An ontology for experimental actions (EXACT)
	Anatomic Ontology for Human Lung Maturation (LUNGMAP-HUMAN)
	Anatomic ontology for mouse lung maturaton (LUNGMAP-MOUSE)
	Anatomic Pathology Lexicon (PATHLEX)
	Anatomical Entity Ontology (AEO)
	Anatomical Therapeutic Chemical Classification (ATC)
	Animal Health Ontology for Livestock (AHOL)
	Animal Health Surveillance Ontology (AHSO)
	Animal Natural History and Life History Ontology (ADW)
	Animal Trait Ontology for Livestock (ATOL)
	Anthology of Biosurveillance Diseases (ABD)
	APA Neuro Cluster (APANEUROCLUSTER)
	APA Occupational and Employment cluster (APAOCUEMPLOY)
	APA Statistical Cluster (APASTATISTICAL)
	APA Tests and Testing cluster (APATANDT)
	APA Treatment Cluster (APATREATMENT)
	apalegal (LEGALAPATEST2)
	Apollo Structured Vocabulary (APOLLO-SV)
	Art & Architecture Thesaurus (AAT)
	Artificial Intelligence Rheumatology Consultant System Ontology (AI-RHEUM)
	Ascomycete Phenotype Ontology (APO)
	Asthma Ontology (AO)
	Autism DSM-ADI-R ontology (ADAR)

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