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Ontologies

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	Biodiversity Information Standards (BIS)
	Cancer Biomedical Informatics Grid (caBIG)
	Clinical and Translational Science Awards (CTSA)
	Consultative Group on International Agricultural Research (CGIAR)
	CTSA Health Ontology Mapper (CTSA-HOM)
	OBO Foundry (OBO Foundry)
	Proteomics Standards Initiative (PSI)
	Unified Medical Language System (UMLS)
	WHO Family of International Classifications (WHO-FIC)

	All Organisms
	Anatomy
	Animal Development
	Animal Gross Anatomy
	Arabadopsis
	Biological Process
	Biomedical Resources
	Cell
	Cellular anatomy
	Chemical
	Development
	Dysfunction
	Ethology
	Experimental Conditions
	Fish Anatomy
	Gene Product
	Genomic and Proteomic
	Gross Anatomy
	Health
	Human
	Human Developmental Anatomy
	Imaging
	Immunology
	Microbial Anatomy
	Molecule
	Mouse Anatomy
	Neurologic Disease
	Neurological Disorder
	Other
	Phenotype
	Physicochemical
	Plant
	Plant Anatomy
	Plant Development
	Protein
	Subcellular
	Subcellular anatomy
	Taxonomic Classification
	Upper Level Ontology
	Vocabularies
	Yeast

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Ontologies

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	Adult Mouse Brain Ontology (Allen Brain Atlas) (ABA-AMB)
	Adverse Event Reporting Ontology (AERO)
	African Traditional Medicine Ontology (ATMO)
	Amino Acid Ontology (AMINO-ACID)
	Amphibian Gross Anatomy Ontology (AAO)
	Amphibian Taxonomy (ATO)
	Anatomic Pathology Lexicon (PATHLEX)
	Anatomical Entity Ontology (AEO)
	Animal Natural History and Life History (ADW)
	Animal Trait Ontology for Livestock (ATOL)
	apollo-akesios (apollo)
	Artificial Intelligence Rheumatology Consultant System Ontology (AI-RHEUM)
	Ascomycete Phenotype Ontology (APO)
	Basic Formal Ontology (BFO)
	BioAssay Ontology (BAO)
	Biodiversity Ontology (BOF)
	Bioinformatics Web Service Ontology (OBIWS)
	Biological Collections Ontology (BCO)
	Biological Imaging Methods (FBbi)
	Biomedical Informatics Research Network Project Lexicon (BIRNLEX)
	Biomedical Resource Ontology (BRO)
	BioModels Ontology (BIOMODELS)
	BioPAX Ontology (BP)
	BioPortal Metadata Ontology (BP-METADATA)
	BioTop Ontology (BT)
	Bleeding History Phenotype Ontology (BHO)
	Body System Terms from ICD11 (ICD11-BODYSYSTEM)
	Bone Dysplasia Ontology (BDO)
	BOOK (BO)
	Breast Cancer Grading Ontology (BCGO)
	Breast Tissue Cell Lines Ontology (MCBCC)
	BRENDA Tissue and Enzyme Source Ontology (BTO)
	Brucellosis Ontology (IDOBRU)
	C. elegans Development Vocabulary (WB-LS)
	C. elegans Gross Anatomy Vocabulary (WB-BT)
	C. elegans Phenotype Vocabulary (WB-PHENOTYPE)
	Cancer Chemoprevention Ontology (CANCO)
	Cancer Research and Management ACGT Master Ontology (ACGT-MO)
	Cardiac Electrophysiology Ontology (EP)
	Cell Behavior Ontology (CBO)
	Cell Culture Ontology (CCONT)
	Cell Cycle Ontology (CCO)
	Cell Line Ontology (CLO)
	Cell Line Ontology [by Mahadevan] (MCCL)
	Cell Ontology (CL)
	Cell Phenotype Ontology (CPO)
	Cereal Plant Development Ontology (GRO-CPD)
	Cereal Plant Gross Anatomy Ontology (GRO-CPGA)
	Cerebrotendinous Xanthomatosis Ontology (CTX)
	Chemical Entities of Biological Interest Ontology (CHEBI)
	Chemical Information Ontology (CHEMINF)
	Clinical Measurement Ontology (CMO)
	Clinical Signs and Symptoms Ontology (CSSO)
	Clusters of Orthologous Groups Analysis Ontology (CAO)
	Coding Symbols for a Thesaurus of Adverse Reaction Terms (COSTART)
	Cognitive Atlas Ontology (COGAT)
	Cognitive Paradigm Ontology (COGPO)
	Common Anatomy Reference Ontology (CARO)
	Common Terminology Criteria for Adverse Events (CTCAE)
	Comparative Data Analysis Ontology (CDAO)
	Computational Neuroscience Ontology (CNO)
	Computer Assisted Brain Injury Rehabilitation Ontology (CABRO)
	Computer Retrieval of Information on Scientific Projects Thesaurus (CRISP)
	Computer-Based Patient Record Ontology (CPRO)
	Congenital Heart Defects Wiki Ontology (CHDWIKI)
	Content Archive Resource Exchange Lexicon (CARELEX)
	Crop Ontology (CO)
	Current Procedural Terminology (CPT)
	Darwin Core Terms (DWC)
	Dengue Fever Ontology (IDODEN)
	Dermatology Lexicon (DERMLEX)
	Diagnostic Ontology (DIAGONT)
	Dictyostelium Discoideum Anatomy Ontology (DDANAT)
	Drosophila Development Ontology (FB-DV)
	Drosophila Gross Anatomy Ontology (FB-BT)
	Eagle-I Research Resource Ontology (ERO)
	Electrocardiography Ontology (ECG)
	Eligibility Feature Hierarchy (ELIG)
	Embrace Data and Methods Ontology (EDAM)
	Emotion Ontology (MFOEM)
	Environment Ontology (ENVO)
	Enzyme Mechanism Ontology (EMO)
	Epilepsy Ontology (EPILONT)
	Epoch Clinical Trial Ontology (CTONT)
	Evidence Codes Ontology (ECO)
	Experimental Conditions Ontology (XCO)
	Experimental Factor Ontology (EFO)
	Exposure Ontology (EXO)
	Extensible Observation Ontology (OBOE)
	Family Health History Ontology (FHHO)
	Fanconi Anemia Ontology (IFAR)
	Fission Yeast Phenotype Ontology (FYPO)
	Fly Taxonomy (FB-SP)
	FlyBase Controlled Vocabulary (FB-CV)
	Foundational Model of Anatomy (FMA)
	Fungal Gross Anatomy Ontology (FAO)
	G Protein-Coupled Receptor BioAssays Ontology (BAO-GPCR)
	Galen Ontology (GALEN)
	Gazetteer Ontology (GAZ)
	Gene Expression Ontology (GEXO)
	Gene Ontology (GO)
	Gene Ontology Extension (GO-EXT)
	Gene Regulation Ontology (GRO)
	General Formal Ontology (GFO)
	General Formal Ontology: Biology (GFO-BIO)
	Genome Component Ontology (GCO)
	Genomic Clinical Decision Support Ontology (GENE-CDS)
	GeoSpecies Ontology (GEOSPECIES)
	Glycomics Ontology (GLYCO)
	Habronattus Courtship Ontology (HC)
	Health Indicator Codes (HLTHINDICES)
	Health Level Seven Reference Implementation Model, Version 3 (HL7)
	Healthcare Common Procedure Coding System (HCPCS)
	Host Pathogen Interactions Ontology (HPIO)
	Human Developmental Anatomy Ontology, abstract version 1 (EHDAA)
	Human Developmental Anatomy Ontology, abstract version 2 (EHDAA2)
	Human Developmental Anatomy Ontology, timed version (EHDA)
	Human Disease Ontology (DOID)
	Human Genome Organization Gene Symbols (HUGO)
	Human Interaction Network Ontology (HINO)
	Human Phenotype Ontology (HP)
	Hymenoptera Anatomy Ontology (HAO)
	Image and Data Quality Assessment Ontology (IDQA)
	Immune Disorder Ontology (IMMDIS)
	Immunogenetics Ontology (IMGT-ONT)
	Infectious Disease Ontology (IDO)
	Influenza Ontology (FLU)
	Information Artifact Ontology (IAO)
	Informed Consent Permission Ontology (CONSENT-ONT)
	Interaction Network Ontology (INO)
	Interaction Ontology (IXNO)
	International Classification for Nursing Practice (ICNP)
	International Classification for Patient Safety (ICPS)
	International Classification of External Causes of Injuries (ICECI)
	International Classification of Diseases, Version 10 (ICD10)
	International Classification of Diseases, Version 10 - Clinical Modfication (ICD10CM)
	International Classification of Diseases, Version 10 - Procedure Coding System (ICD10PCS)
	International Classification of Diseases, Version 9 - Clinical Modification (ICD9CM)
	International Classification of Functioning, Disability and Health (ICF)
	International Classification of Primary Care (ICPC)
	International Classification of Primary Care - 2 PLUS (ICPC2P)
	Kinetic Simulation Algorithm Ontology (KISAO)
	Leukocyte Surface Marker Ontology (LSM)
	Lipid Ontology (LIPRO)
	Loggerhead Nesting Ontology (LHN)
	Logical Observation Identifier Names and Codes (LOINC)
	Lowongan Kerja Terbaru 2013 (career)
	Maize Gross Anatomy Ontology (ZEA)
	Major Histocompatibility Complex Ontology (MHC)
	Malaria Ontology (IDOMAL)
	Mammalian Phenotype Ontology (MP)
	Mass Spectrometry Ontology (MS)
	Master Drug Data Base Clinical Drugs (MDDB)
	Measurement Method Ontology (MMO)
	Medaka Fish Anatomy and Development Ontology (MFO)
	Medical Diagnostic Categories - Diagnosis Related Groups (MDCDRG)
	Medical Dictionary for Regulatory Activities (MEDDRA)
	Medical Subject Headings (MESH)
	MedlinePlus Health Topics (MEDLINEPLUS)
	Mental Functioning Ontology (MF)
	Metagenome and Microbes Environmental Ontology (MEO)
	Metathesaurus Current-Procedural-Terminology Hierarchical Terms (MTHCH)
	Metathesaurus Version of Minimal Standard Terminology Digestive Endoscopy (MTHMST)
	Metathesaurus Version of Minimal Standard Terminology Digestive Endoscopy, French Translation (MTHMSTFRE)
	Microarray and Gene Expression Data Ontology (MO)
	MicroRNA Ontology (MIRNAO)
	Minimal Anatomical Terminology (MAT)
	Minimal Information about any Sequence Controlled Vocabularies (MIXSCV)
	Minimal Information about any Sequence Ontology (MIXS)
	Mobile Genetic Element Ontology (MEGO)
	Mosquito Gross Anatomy Ontology (TGMA)
	Mosquito Insecticide Resistance Ontology (MIRO)
	Mouse Adult Gross Anatomy Ontology (MA)
	Mouse Experimental Design Ontology (MEDO)
	Mouse Gross Anatomy and Development Ontology (EMAP)
	Mouse Pathology Ontology (MPATH)
	Multiple Alignment Ontology (MAO)
	NanoParticle Ontology (NPO)
	National Drug Data File (NDDF)
	National Drug File (NDFRT)
	Natural Products Ontology (NatPrO)
	NCBI organismal classification (NCBITaxon)
	NCI Thesaurus (NCIt)
	Neglected Tropical Disease Ontology (NTDO) (NTDO)
	Neomark Oral Cancer Ontology (NeoMark)
	Neomark Oral Cancer-Centred Ontology (NeoMarkOntology)
	Neural ElectroMagnetic Ontology (NEMO)
	Neural Motor Recovery Ontology (NeuMORE)
	Neural-Immune Gene Ontology (NIGO)
	Neuro Behavior Ontology (NBO)
	Neuroscience Information Framework Standard ontology (nif)
	NIF Cell (NIF_Cell)
	NIF Dysfunction (NIF_Dysfunction)
	NIF-Subcellular (NIF-Subcell)
	NMR-instrument specific component of metabolomics investigations (NMR)
	Non Randomized Controlled Trials Ontology (NonRCTOntology)
	Nursing Interventions Classification (NIC) (NIC)
	OBO relationship types (OBO_REL)
	Online Mendelian Inheritance in Man (OMIM)
	Ontological Knowledge Base Model for Cystic Fibrosis (ONTOKBCF)
	Ontology for Biomedical Investigations (OBI)
	Ontology for disease genetic investigation (ODGI)
	Ontology for Drug Discovery Investigations (DDI)
	Ontology for General Medical Science (OGMS)
	Ontology for Genetic Interval (OGI)
	Ontology for Genetic Susceptibility Factor (OGSF)
	Ontology for MicroRNA Target Prediction (OMIT)
	Ontology for Newborn Screening Follow-up and Translational Research (ONSTR)
	Ontology for Parasite LifeCycle (OPL)
	Ontology of Adverse Events (OAE)
	Ontology of Clinical Research (OCRe) (OCRe)
	Ontology of Core Data Mining Entities (OntoDM-core)
	Ontology of Data Mining Investigations (OntoDM-KDD)
	Ontology of Experimental Variables and Values (OoEVV)
	Ontology of General Purpose Datatypes (OntoDT)
	Ontology of Geographical Region (OGR)
	Ontology of Glucose Metabolism Disorder (OGMD)
	Ontology of homology and related concepts in biology (HOM)
	Ontology of Language Disorder in Autism (LDA)
	Ontology of Medically Related Social Entities (OMRSE)
	Ontology of Physical Exercises (OPE)
	Ontology of Physics for Biology (OPB.properties)
	Ontology of Vaccine Adverse Events (OVAE)
	OntoPneumo (OntoPneumo)
	Orphanet Ontology of Rare Diseases (OntoOrpha)
	OWL Version of MeSH (RH-MESH)
	Parasite Experiment Ontology (PEO)
	Pathogen transmission (TRANS)
	Pathogenic Disease Ontology (PDO)
	Pathway ontology (PW)
	Pediatric Terminology (PedTerm)
	PHArmacogenomic RElationships Ontology (PHARE)
	Pharmacovigilance Ontology (PVOnto)
	PharmGKB-in-OWL (pharmgkb-owl)
	PhenomeBLAST ontology (phenomeblast-owl)
	Phenotype Fragment Ontology (PFO)
	Phenotypic quality (PATO)
	PhenX Terms (PhenX)
	Phylogenetic Ontology (PhylOnt)
	Physical Medicine and Rehabilitation (PMR)
	Physician Data Query (PDQ)
	Physico-chemical methods and properties (FIX)
	Physico-chemical process (REX)
	PKO_Re (PKO)
	Plant Anatomy (PO_PAE)
	Plant environmental conditions (EO)
	Plant Ontology (PO)
	Plant Structure Development Stage (PO_PSDS)
	Plant Trait Ontology (TO)
	PMA 2010 (pma)
	Porifera Ontology (PORO)
	Protein modification (MOD)
	PRotein Ontology (PR)
	Protein Ontology [by Sidhu] (pro-ont)
	Protein-protein interaction (MI)
	Proteomics data and process provenance (ProPreO)
	Proteomics Pipeline Infrastructure for CPTAC (CPTAC)
	PROV-O (prov-o)
	Pseudogene (pseudo)
	Quadrupedal Gait (CAMRQ)
	Quantitative Imaging Biomarker Ontology (QIBO)
	Quantities, Units, Dimensions and Types (QUDT)
	RadLex (RID)
	Randomized Controlled Trials (RCT) Ontology (RCTOntology)
	RAPID Phenotype Ontology (RPO)
	Rat Strain Ontology (RS)
	Read Codes, Clinical Terms Version 3 (CTV3) (RCD)
	Regulation of Gene Expression Ontolology (ReXO)
	Regulation of Transcription Ontolology (ReTO)
	Reproductive trait and phenotype ontology (REPO)
	Research Network and Patient Registry Inventory Ontology (RNPRIO)
	RNA ontology (RNAO)
	Role Ontology (RoleO)
	RxNORM (RXNORM)
	Sample processing and separation techniques (SEP)
	SANOU (OntoMA)
	Santa Barbara Coastal Observation Ontology (oboe-sbc)
	Semantic Web for Earth and Environment Technology (SWEET)
	Semantically-integrated human physiome (SemPhysKB-Human)
	SemanticScience Integrated Ontology (SIO)
	Sequence types and features (SO)
	Situation-Based Access Control (SitBAC)
	Skin Physiology Ontology (SPO)
	Sleep Domain Ontology (SDO)
	SNOMED Clinical Terms (SNOMEDCT)
	SNOMED International, 1998 (SNMI)
	SNP-Ontology (SNPO)
	Software Ontology (SWO)
	Solanaceae Phenotype Ontology (SPTO)
	SoyOntology (SOY)
	Spatial Ontology (BSPO)
	Spider Ontology (SPD)
	Student Health Record (SHR)
	Subcellular Anatomy Ontology (SAO) (SAO)
	Suggested Ontology for Pharmacogenomics (SOPHARM)
	Symptom Ontology (SYMP)
	Synapse Ontology (SYN)
	Syndromic Surveillance Ontology (SSO)
	Synthetic Biology Open Language Visual (SBOLv)
	SysMO-JERM (JERM)
	Systems Biology (SBO)
	Systems Chemical Biology/Chemogenomics (Chem2Bio2OWL)
	Taxonomic rank vocabulary (TAXRANK)
	Taxonomy for rehabilitation of knee conditions (TRAK)
	Teleost Anatomy Ontology (TAO)
	Teleost taxonomy (TTO)
	Terminological and ontological Knowledge resources (TOK)
	Terminology for the Description of Dynamics (TEDDY)
	Terminology of Anatomy of Human Embryology (TAHE)
	Terminology of Anatomy of Human Histology (TAHH)
	The Biomedical Research Integrated Domain Group (BRIDG) model (BRIDG)
	The Drug Interaction Knowledge Base (dikb-evidence)
	ThomCan: Upper-level Cancer Ontology (ThomCan)
	Tick gross anatomy (TADS)
	Time Event Ontology (TEO)
	Tissue Microarray Ontology (TMA)
	Top-Menelas (Top-Menelas)
	Traditional Medicine Constitution Value Set (TM-CONST)
	Traditional Medicine Meridian Value Sets (TM-MER)
	Traditional Medicine Other Factors Value Set (TM-OTHER-FACTORS)
	Traditional Medicine Signs and Symptoms Value Set (TM-SIGNS-AND-SYMPTS)
	Translational Medicine Ontology (TMO)
	Tribolium Ontology (TrOn)
	Uber anatomy ontology (UBERON)
	uni-ece (uni-ece)
	Units of measurement (UO)
	Units Ontology (UnitsOntology)
	Vaccine Ontology (VO)
	Variation Ontology (VariO)
	vertebrate Homologous Organ Groups (vHOG)
	Vertebrate Skeletal Anatomy Ontology (VSAO)
	Vertebrate Taxonomy Ontology (VTO)
	Vertebrate Trait Ontology (VT)
	Veterans Health Administration National Drug File (VANDF)
	Vital Sign Ontology (VSO)
	VIVO (vivo)
	Web-Service Interaction Ontology (WSIO)
	Wheat trait (CO_Wheat)
	WHO Adverse Reaction Terminology (WHO)
	XEML Environment Ontology (XeO)
	Xenopus anatomy and development (XAO)
	Yeast phenotypes (YPO)
	Zebrafish anatomy and development (ZFA)