Kidney Tissue Atlas Ontology

Last uploaded: March 16, 2024
Preferred Name

notochord

Synonyms

embryonic notocord

notocord

notochorda

Definitions

The notochord appears early in embryogeny and plays an important role in promoting or organizing the embryonic development of nearby structures. In most adult chordates the notochord disappears or becomes highly modified. In some non-vertebrate chordates and fishes the notochord persists as a laterally flexible but incompressible skeletal rod that prevents telescopic collapse of the body during swimming[TOLWEB] A flexible rod-shaped body found in embryos of all chordates. It is composed of cells derived from the mesoderm and defines the primitive axis of the embryo. In some chordates, it persists throughout life as the main axial support of the body, while in most vertebrates it becomes the nucleus pulposus of the intervertebral disc. The notochord is found ventral to the neural tube.

ID

http://purl.obolibrary.org/obo/UBERON_0002328

comment

The notochord appears early in embryogeny and plays an important role in promoting or organizing the embryonic development of nearby structures. In most adult chordates the notochord disappears or becomes highly modified. In some non-vertebrate chordates and fishes the notochord persists as a laterally flexible but incompressible skeletal rod that prevents telescopic collapse of the body during swimming[TOLWEB]

axiom_lost_from_external_ontology

relationship type change: differentiates_from mesoderm (AAO:0000304) CHANGED TO: develops_from mesoderm (UBERON:0000926)[AAO]

Contributor

https://github.com/cmungall

https://github.com/wdahdul

database_cross_reference

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C12463

http://linkedlifedata.com/resource/umls/id/C0028439

http://www.snomedbrowser.com/Codes/Details/308820002

http://en.wikipedia.org/wiki/Notochord

http://evolution.berkeley.edu/evolibrary/images/history/notochords.jpg

VHOG:0000199

MESH:D009672

ZFA:0000135

UMLS:C0028439

VSAO:0000032

EHDAA2:0001277

NCIT:C12463

XAO:0000055

AAO:0000327

BTO:0001768

TAO:0000135

Wikipedia:Notochord

http://evolution.berkeley.edu/evolibrary/images/history/notochords.jpg

EMAPA:16191

MAT:0000281

SCTID:308820002

CALOHA:TS-0690

EHDAA:1241

EHDAA:6021

EV:0100002

FMA:85521

GAID:1311

MESH:A16.254.610

depicted_by

http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png

depiction

http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png

development_notes

In between vertebra the notochord becomes the nucleus pulposus, under it degenerates, and at anterior end in some species its tissue merges with some of the cranial bones.. Some organisms retain a post-embryonic notochord.

develops_from

http://purl.obolibrary.org/obo/UBERON_0006267

http://purl.obolibrary.org/obo/UBERON_0004880

dorsal to

http://purl.obolibrary.org/obo/UBERON_0001555

existence starts during

http://purl.obolibrary.org/obo/UBERON_0000068

external_definition

Slender rod of fibrous connective tissue surrounding a core of fluid-filled cells of mesodermal origin; it lies above the gut and directly beneath the spinal cord. The notochord is present during early development and in a few cases it is retained through life; however, usually the notochord is replaced by the vertebral column.[AAO]

Avascular multi-tissue structure composed of large vacuolated epithelial cells (chordablasts) and perichordal fibrous tissue.[VSAO]

Rod-like principal supportive element of the embryo and larva, present in the midline just ventral to the neural tube, and differentiating during the segmentation period to form large vacuolated epithelial cells and a surrounding a sheath of fibrous and elastic layers. Layering of the sheath may differ in structure, thickness and development among groups; in cypriniforms there are actually three very thin layers to the sheath. A functional, well developed notochord is present throughout life in certain basal fish groups but not in cypriniforms. Kimmel et al, 1995.[TAO]

has exact synonym

embryonic notocord

notocord

has related synonym

notochorda

has_obo_namespace

uberon

has_relational_adjective

notochordal

homology_notes

(...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (3) a stiff, longitudinal rod of turgid cells along the dorsal part of the body that is called a notochord (...).[well established][VHOG]

id

UBERON:0002328

imported from

http://purl.obolibrary.org/obo/mondo.owl

http://purl.obolibrary.org/obo/oae.owl

http://purl.obolibrary.org/obo/hp.owl

http://purl.obolibrary.org/obo/cl.owl

http://purl.obolibrary.org/obo/uberon.owl

in_subset

http://purl.oboInOwllibrary.org/oboInOwl/uberon#vertebrate_core

http://purl.oboInOwllibrary.org/oboInOwl/uberon/core#uberon_slim

http://purl.oboInOwllibrary.org/oboInOwl/uberon#uberon_slim

http://purl.oboInOwllibrary.org/oboInOwl/uberon/core#pheno_slim

http://purl.oboInOwllibrary.org/oboInOwl/uberon/core#vertebrate_core

label

notochord

notation

UBERON:0002328

only in taxon

http://purl.obolibrary.org/obo/NCBITaxon_7711

part_of

http://purl.obolibrary.org/obo/UBERON_0011137

prefLabel

notochord

produces

http://purl.obolibrary.org/obo/PR_000014841

textual definition

A flexible rod-shaped body found in embryos of all chordates. It is composed of cells derived from the mesoderm and defines the primitive axis of the embryo. In some chordates, it persists throughout life as the main axial support of the body, while in most vertebrates it becomes the nucleus pulposus of the intervertebral disc. The notochord is found ventral to the neural tube.

treeView

http://purl.obolibrary.org/obo/UBERON_0006267

http://purl.obolibrary.org/obo/UBERON_0004880

http://purl.obolibrary.org/obo/UBERON_0011137

ventral to

http://purl.obolibrary.org/obo/UBERON_0001049

subClassOf

http://purl.obolibrary.org/obo/UBERON_0000481

http://purl.obolibrary.org/obo/UBERON_0000062

http://purl.obolibrary.org/obo/UBERON_0004120

http://purl.obolibrary.org/obo/UBERON_0004121

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Delete Mapping To Ontology Source
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