Biological Pathway Taxonomy

Last uploaded: March 30, 2022
Preferred Name

Familial Mediterranean Fever

Synonyms

PathwayType: signaling

PMID: 24247370

CellType: macrophage

Organ_System: hematological system

Description: Familial Mediterranean fever (FMF) is the most common monogenic autoinflammatory disease worldwide and has an autosomal recessive inheritance. Pathway is built manually using published studies.

Link: https://mammal-profservices.pathwaystudio.com/app/sd?urn=urn:agi-pathway:uuid-87736807-c3f0-4428-abcb-300fa1d545f0

CellType: mast cell

NodeType: Pathway

CellType: dendritic cell

Notes: Headnote: Familial Mediterranean fever (FMF) is the most common monogenic autoinflammatory disease and has an autosomal recessive mode of inheritance. FMF is caused by mutations in the MEFV gene, which encodes pyrin. The disease is more common among people originating from the eastern Mediterranean area including the Jewish, Turkish, Armenian, and Arab populations from this region. In these ethnic groups, the prevalence of FMF is between 1 in 500 and 1 in 1000 and MEFV mutations are very common, with the carrier rate reaching 1 in 5. The disease has spread over the world with the migrations of these populations over the past century. Signaling description: Pyrin can form part of the NLRP3 inflammasome complex and mutations in MEFV are associated with excess inflammation via increased production of IL1B. Pyrin has been suggested to associate with PYCARD and increase IL1B processing. The function of pyrin has not been completely elucidated, but it appears to be a suppressor of CASP1 activation. Outcome effects: CASP1 is the enzyme which stimulates the production of IL1B, a cytokine central to the process of inflammation. Therefore, an ineffective pyrin fails to inhibit inflammation which results in inflammatory episodes at the cell membrane at differing sites. Highlighted proteins: Protein with increased expression or activity is highlighted in red. Mutated genes: Mutated gene is shown in white-out style.

PMID: 17431422

Pathway_Author: V. Sobolev ORCID:0000-0003-4779-156X

Source: Diseases

ID

urn:agi-pathway:uuid-87736807-c3f0-4428-abcb-300fa1d545f0

database_cross_reference

PS:PathwayType

PS:Description

PS:Pathway_Author

PS:Link

PS:CellType

PS:Organ_System

PS:PMID

PS:NodeType

PS:Notes

PS:Source

has_exact_synonym

PathwayType: signaling

PMID: 24247370

CellType: macrophage

Organ_System: hematological system

Description: Familial Mediterranean fever (FMF) is the most common monogenic autoinflammatory disease worldwide and has an autosomal recessive inheritance. Pathway is built manually using published studies.

Link: https://mammal-profservices.pathwaystudio.com/app/sd?urn=urn:agi-pathway:uuid-87736807-c3f0-4428-abcb-300fa1d545f0

CellType: mast cell

NodeType: Pathway

CellType: dendritic cell

Notes: Headnote: Familial Mediterranean fever (FMF) is the most common monogenic autoinflammatory disease and has an autosomal recessive mode of inheritance. FMF is caused by mutations in the MEFV gene, which encodes pyrin. The disease is more common among people originating from the eastern Mediterranean area including the Jewish, Turkish, Armenian, and Arab populations from this region. In these ethnic groups, the prevalence of FMF is between 1 in 500 and 1 in 1000 and MEFV mutations are very common, with the carrier rate reaching 1 in 5. The disease has spread over the world with the migrations of these populations over the past century. Signaling description: Pyrin can form part of the NLRP3 inflammasome complex and mutations in MEFV are associated with excess inflammation via increased production of IL1B. Pyrin has been suggested to associate with PYCARD and increase IL1B processing. The function of pyrin has not been completely elucidated, but it appears to be a suppressor of CASP1 activation. Outcome effects: CASP1 is the enzyme which stimulates the production of IL1B, a cytokine central to the process of inflammation. Therefore, an ineffective pyrin fails to inhibit inflammation which results in inflammatory episodes at the cell membrane at differing sites. Highlighted proteins: Protein with increased expression or activity is highlighted in red. Mutated genes: Mutated gene is shown in white-out style.

PMID: 17431422

Pathway_Author: V. Sobolev ORCID:0000-0003-4779-156X

Source: Diseases

id

urn:agi-pathway:uuid-87736807-c3f0-4428-abcb-300fa1d545f0

label

Familial Mediterranean Fever

notation

uuid-87736807-c3f0-4428-abcb-300fa1d545f0

prefLabel

Familial Mediterranean Fever

treeView

urn:agi-folder:f

urn:agi-folder:hematological_system

urn:agi-folder:familial_mediterranean_fever

subClassOf

urn:agi-folder:f

urn:agi-folder:hematological_system

urn:agi-folder:familial_mediterranean_fever

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http://purl.obolibrary.org/obo/DOID_2987 DOID LOOM
http://purl.obolibrary.org/obo/MONDO_0018088 EFO LOOM
http://purl.obolibrary.org/obo/DOID_2987 DOID LOOM
http://purl.obolibrary.org/obo/MONDO_0018088 MONDO LOOM
http://purl.bioontology.org/ontology/OMIM/249100 OMIM LOOM
http://purl.bioontology.org/ontology/RCTV2/C373100 RCTV2 LOOM
http://purl.obolibrary.org/obo/MONDO_0018088 DOVES LOOM
http://purl.obolibrary.org/obo/MONDO_0018088 KTAO LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Familial_Mediterranean_Fever CSEO LOOM
http://www.semanticweb.org/ontologies/2012/5/Ontology1338526551855.owl#Familial_Mediterranean_fever RPO LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#C16.320.382.625 RH-MESH LOOM
http://www.gamuts.net/entity#familial_Mediterranean_fever GAMUTS LOOM
http://www.owl-ontologies.com/unnamed.owl#RID18199 DERMLEX LOOM
http://www.owl-ontologies.com/NPOntology.owl#DOID_2987 NATPRO LOOM
http://purl.obolibrary.org/obo/NCIT_C84707 BERO LOOM
https://github.com/sap218/ocimido/blob/master/ontology/ocimido.owl#OCIMIDO_00652 OCIMIDO LOOM
http://www.limics.org/hrdo/rdfns#pat_id_920 HRDO LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C84707 NCIT LOOM
http://purl.obolibrary.org/obo/DOID_2987 CLO LOOM
http://purl.obolibrary.org/obo/DOID_2987 DTO LOOM
http://purl.obolibrary.org/obo/DOID_2987 BAO LOOM
http://purl.obolibrary.org/obo/DOID_2987 HHEAR LOOM
http://purl.obolibrary.org/obo/DOID_2987 NIFSTD LOOM
http://purl.obolibrary.org/obo/DOID_2987 FNS-H LOOM
http://purl.bioontology.org/ontology/SNOMEDCT/12579009 SNOMEDCT LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#9501 OCHV LOOM
http://purl.obolibrary.org/obo/OMIT_0011497 OMIT LOOM
http://purl.obolibrary.org/obo/DERMO_0000694 DERMO LOOM
http://www.phoc.org.cn/pmo/class/PMO_00036748 PMAPP-PMO LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D010505 RH-MESH LOOM
http://purl.bioontology.org/ontology/ICD9CM/277.31 ICD9CM LOOM
http://purl.bioontology.org/ontology/RCD/C3731 RCD LOOM
http://www.orpha.net/ORDO/Orphanet_342 ORDO LOOM
http://purl.jp/bio/4/id/200906016016669571 IOBC LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0031069 OCHV LOOM
http://purl.bioontology.org/ontology/MESH/D010505 MESH LOOM
http://purl.bioontology.org/ontology/MEDDRA/10016207 MEDDRA LOOM