loading...| Preferred Name | somite | |
| Synonyms |
somitic mesoderm epithelial somite epimere mesoderm epimere somites somitus mesodermal cluster |
|
| Definitions |
Somites are spheres of epithelial cells that form sequentially along the anterior-posterior axis of the embryo through mesenchymal to epithelial transition of the presomitic mesoderm. When the somite becomes segmented from the segmental plate, it is composed of an epithelial sac enclosing mesenchymal somitocoel cells. Thereafter the somite differentiates into two parts, the ventro-medial mesenchymal sclerotome and the dorso-lateral epithelial dermomyotome. This change in the epithelial somite depends on surrounding tissue [PMID:15906248] |
|
| ID |
http://purl.obolibrary.org/obo/UBERON_0002329 |
|
| comment |
When the somite becomes segmented from the segmental plate, it is composed of an epithelial sac enclosing mesenchymal somitocoel cells. Thereafter the somite differentiates into two parts, the ventro-medial mesenchymal sclerotome and the dorso-lateral epithelial dermomyotome. This change in the epithelial somite depends on surrounding tissue [PMID:15906248] |
|
| database_cross_reference |
ZFA:0000155 MAT:0000068 Wikipedia:Somite UMLS:C0376449 BTO:0001558 MESH:D019170 XAO:0000058 MIAA:0000068 EHDAA2:0003436 EMAPA:31169 NCIT:C34302 VHOG:0000191 TAO:0000155 AEO:0001015 AAO:0010569 EHDAA:366 EHDAA:699 FMA:85522 GAID:1306 |
|
| depiction |
http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png |
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| develops_from | ||
| has_broad_synonym |
mesodermal cluster |
|
| has_obo_namespace |
uberon |
|
| has_related_synonym |
somitic mesoderm epithelial somite epimere mesoderm epimere somites somitus |
|
| IAO_0000232 |
EDITOR_NOTE currently classified as an epithelial vesicle, consistent with EHDAA2 and https://github.com/obophenotype/uberon/wiki/The-neural-crest. Consider making 'somitic mesoderm' a separate term and correlate with regionalization processes. Consider moving ZFA term to 'trunk somite' as it is part of the trunk |
|
| id |
UBERON:0002329 |
|
| in taxon | ||
| in_subset |
http://purl.obolibrary.org/obo/uberon/core#vertebrate_core |
|
| label |
somite |
|
| notation |
UBERON:0002329 |
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| only in taxon | ||
| prefLabel |
somite |
|
| RO_0002161 | ||
| textual definition |
Somites are spheres of epithelial cells that form sequentially along the anterior-posterior axis of the embryo through mesenchymal to epithelial transition of the presomitic mesoderm. |
|
| treeView | ||
| UBPROP_0000001 |
Post-cranial axial segments which form sclerotome and dermomyotome.[AAO] Undifferentiated mesodermal components of early trunk or tail segments or metameres, derived from paraxial mesoderm; forms myotomes, sclerotomes and perhaps dermatomes. Kimmel et al, 1995.[TAO] |
|
| UBPROP_0000002 |
relationship type change: part_of paraxial mesoderm (AAO:0010568) CHANGED TO: develops_from paraxial mesoderm (UBERON:0003077)[AAO] relationship loss: develops_from paraxial mesenchyme (TAO:0000942)[TAO] relationship type change: OBO_REL:part_of trunk (TAO:0001115) CHANGED TO: develops_from trunk (UBERON:0002100)[TAO] |
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| UBPROP_0000003 |
(...) cephalocordates and craniates belong to a group known as Somitichordata. Somitichordate synapomorphies include (1) somites (...) (reference 1); The idea that the last common ancestor of bilaterian animals (Urbilateria) was segmented has been raised recently on evidence coming from comparative molecular embryology (reference 2).[well established][VHOG] |
|
| UBPROP_0000007 |
somitic |
|
| subClassOf |
http://purl.obolibrary.org/obo/UBERON_0007503 |