Provisional Cell Ontology

Last uploaded: January 15, 2024
Preferred Name

cerebrospinal fluid

Synonyms

cerebral spinal fluid

CSF

liquor cerebrospinalis

spinal fluid

Definitions

A clear, colorless, bodily fluid, that occupies the subarachnoid space and the ventricular system around and inside the brain and spinal cord.

ID

http://purl.obolibrary.org/obo/UBERON_0001359

database_cross_reference

UMLS:C0007806

CALOHA:TS-0130

ENVO:02000029

ZFA:0001626

VHOG:0001278

BTO:0000237

NCIT:C12692

Wikipedia:Cerebrospinal_fluid

MAT:0000499

BIRNLEX:1798

EHDAA2:0004441

MESH:D002555

TAO:0002184

EFO:0000329

EV:0100311

FMA:20935

GAID:1181

MA:0002503

definition

A clear, colorless, bodily fluid, that occupies the subarachnoid space and the ventricular system around and inside the brain and spinal cord.

develops_from

http://purl.obolibrary.org/obo/UBERON_0002307

editor note

many sources state the CP as sole producer of CSF, but this is disputed [DOI:10.1007/s11064-015-1581-6]

filtered through

http://purl.obolibrary.org/obo/UBERON_0001886

has_exact_synonym

cerebral spinal fluid

CSF

has_related_synonym

liquor cerebrospinalis

spinal fluid

hasOBONamespace

uberon

id

UBERON:0001359

inSubset

http://purl.obolibrary.org/obo/uberon/core#efo_slim

http://purl.obolibrary.org/obo/uberon/core#vertebrate_core

http://purl.obolibrary.org/obo/uberon/core#pheno_slim

http://purl.obolibrary.org/obo/uberon/core#uberon_slim

label

cerebrospinal fluid

located in

http://purl.obolibrary.org/obo/UBERON_0005281

notation

UBERON:0001359

prefLabel

cerebrospinal fluid

treeView

http://purl.obolibrary.org/obo/UBERON_0002307

UBPROP_0000001

Portion of organism substance that is a clear fluid that occupies the subarachnoid space and the ventricular system around and inside the brain.[TAO]

UBPROP_0000003

In vertebrates, at early stages of Central Nervous System (CNS) development, the architecture of the brain primordium reveals the presence of the cavity of brain vesicles, which is filled by Embryonic Cerebro-Spinal Fluid (E-CSF). (...) Rat and chick E-CSF proteomes are similar, although rat is more complex in certain groups of proteins, e.g., apolipoproteins, which may be involved in the control of neural diversity, and has soluble enzymes present, just like adult human CSF, but unlike chick E-CSF, revealing phylogenetic brain differences between these groups of vertebrates.[uncertain][VHOG]

UBPROP_0000012

the FMA def states that this is subarachnoid spaces only. ZFA def states subarachnoid spaces and brain ventricles, but not SC (and has part_of to brain). Circulation: It circulates from the lateral ventricles to the foramen of Monro (Interventricular foramen), third ventricle, aqueduct of Sylvius (Cerebral aqueduct), fourth ventricle, foramen of Magendie (Median aperture) and foramina of Luschka (Lateral apertures), subarachnoid space over brain and spinal cord. It should be noted that the CSF moves in a pulsatile manner throughout the CSF system with nearly zero net flow. CSF is reabsorbed into venous sinus blood via arachnoid granulations.

EHDAA2 models this as developing from CP, which is wrong

subClassOf

http://purl.obolibrary.org/obo/UBERON_0007779

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Delete Mapping To Ontology Source
http://purl.obolibrary.org/obo/UBERON_0001359 GO-PLUS SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 UBERON SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 OBA SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 EFO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 VO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 CL SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 MONDO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 OAE SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 PDRO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 EUPATH SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 OBI SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 INBANCIDO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 CHEAR SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 OBCS SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 ONE SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 ORCS SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 OBIB SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 BERO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 HHEAR SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 CIDO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 UPHENO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 OBI_IEE SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 NIFSTD SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 ICO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 GENEPIO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 OPL SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 MAXO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 ENVO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 FNS-H SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 NMDCO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001359 GO-PLUS LOOM
http://purl.obolibrary.org/obo/XAO_0005506 XPO LOOM
http://purl.obolibrary.org/obo/UBERON_0001359 EFO LOOM
http://purl.obolibrary.org/obo/UBERON_0001359 VO LOOM
http://purl.obolibrary.org/obo/UBERON_0001359 UBERON LOOM
http://purl.obolibrary.org/obo/UBERON_0001359 OBA LOOM
http://purl.obolibrary.org/obo/UBERON_0001359 CL LOOM
https://explaination.net/onto/tree-structure-brain-anatomy-FastSurfer#Cerebrospinal_Fluid BRAIN-COF LOOM
http://id.nlm.nih.gov/mesh/D002555 MDM LOOM
http://purl.obolibrary.org/obo/MESH_D002555 BERO LOOM
http://purl.obolibrary.org/obo/NCIT_C12692 BERO LOOM
http://purl.bioontology.org/ontology/MESH/Q000134 MESH LOOM
http://purl.bioontology.org/ontology/SNOMEDCT/65216001 SNOMEDCT LOOM
http://purl.bioontology.org/ontology/MESH/D002555 MESH LOOM
http://purl.bioontology.org/ontology/CSP/2049-9575 CRISP LOOM
http://purl.jp/bio/11/meo/MEO_0000624 MEO LOOM
http://purl.org/zonmw/id-amr/10122 ID-AMR LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C12692 NCIT LOOM
http://purl.obolibrary.org/obo/XAO_0005506 UPHENO LOOM
http://purl.obolibrary.org/obo/XAO_0005506 XAO LOOM
http://www.ifomis.org/hdot/HDOT_PM_0005 VDOT LOOM
http://purl.bioontology.org/ontology/RCD/7N0B1 RCD LOOM
http://www.projecthalo.com/aura#Cerebrospinal-Fluid AURA LOOM
http://purl.obolibrary.org/obo/VHOG_0001278 VHOG LOOM
http://doe-generated-ontology.com/OntoAD#C0007806 ONTOAD LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D002555 RH-MESH LOOM
http://scai.fraunhofer.de/AlzheimerOntology#cerebrospinal_fluid ADO LOOM
http://purl.jp/bio/4/id/200906048592572612 IOBC LOOM
http://purl.obolibrary.org/obo/OMIT_0003884 OMIT LOOM
http://purl.obolibrary.org/obo/BTO_0000237 BTO LOOM
http://localhost/plosthes.2017-1#3032 PLOSTHES LOOM
http://purl.obolibrary.org/obo/UBERON_0001359 OAE LOOM
http://purl.obolibrary.org/obo/UBERON_0001359 PDRO LOOM
http://purl.obolibrary.org/obo/UBERON_0001359 EUPATH LOOM
http://purl.obolibrary.org/obo/UBERON_0001359 OBI LOOM
http://purl.obolibrary.org/obo/UBERON_0001359 INBANCIDO LOOM
http://purl.obolibrary.org/obo/UBERON_0001359 CHEAR LOOM
http://purl.obolibrary.org/obo/UBERON_0001359 OBCS LOOM
http://purl.obolibrary.org/obo/UBERON_0001359 ONE LOOM
http://purl.obolibrary.org/obo/UBERON_0001359 ORCS LOOM
http://purl.obolibrary.org/obo/UBERON_0001359 OBIB LOOM
http://purl.obolibrary.org/obo/UBERON_0001359 HHEAR LOOM
http://purl.obolibrary.org/obo/UBERON_0001359 CIDO LOOM
http://purl.obolibrary.org/obo/UBERON_0001359 UPHENO LOOM
http://purl.obolibrary.org/obo/UBERON_0001359 OBI_IEE LOOM
http://purl.obolibrary.org/obo/UBERON_0001359 NIFSTD LOOM
http://purl.obolibrary.org/obo/UBERON_0001359 ICO LOOM
http://purl.obolibrary.org/obo/UBERON_0001359 GENEPIO LOOM
http://purl.obolibrary.org/obo/UBERON_0001359 OPL LOOM
http://purl.obolibrary.org/obo/UBERON_0001359 MAXO LOOM
http://purl.obolibrary.org/obo/UBERON_0001359 ENVO LOOM
http://purl.obolibrary.org/obo/UBERON_0001359 FNS-H LOOM
http://purl.obolibrary.org/obo/UBERON_0001359 NMDCO LOOM
http://purl.obolibrary.org/obo/MAT_0000499 MAT LOOM
http://purl.obolibrary.org/obo/EMAPA_36849 EMAPA LOOM
http://purl.obolibrary.org/obo/EHDAA2_0004441 EHDAA2 LOOM
http://ontology.apa.org/apaonto/termsonlyOUT%20(5).owl#Cerebrospinal_Fluid APANEUROCLUSTER LOOM
http://ontology.apa.org/apaonto/termsonlyOUT%20(5).owl#Cerebrospinal_Fluid APAONTO LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#2675 OCHV LOOM
http://www.co-ode.org/ontologies/galen#CerebroSpinalFluid GALEN LOOM
http://purl.jp/bio/11/meo/MEO_0000398 MEO LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Cerebrospinal_Fluid CSEO LOOM
http://purl.org/obo/owlapi/fma#FMA_20935 BIOMODELS LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#A12.207.270.210 RH-MESH LOOM
http://purl.obolibrary.org/obo/MA_0002503 MA LOOM