Ontology of Vaccine Adverse Events

Last uploaded: May 14, 2016
Preferred Name

notochord
Synonyms

notochorda

notocord

embryonic notocord

Definitions

A flexible rod-shaped body found in embryos of all chordates. It is composed of cells derived from the mesoderm and defines the primitive axis of the embryo. In some chordates, it persists throughout life as the main axial support of the body, while in most vertebrates it becomes the nucleus pulposus of the intervertebral disc. The notochord is found ventral to the neural tube. The notochord appears early in embryogeny and plays an important role in promoting or organizing the embryonic development of nearby structures. In most adult chordates the notochord disappears or becomes highly modified. In some non-vertebrate chordates and fishes the notochord persists as a laterally flexible but incompressible skeletal rod that prevents telescopic collapse of the body during swimming[TOLWEB]

ID

http://purl.obolibrary.org/obo/UBERON_0002328

comment

The notochord appears early in embryogeny and plays an important role in promoting or organizing the embryonic development of nearby structures. In most adult chordates the notochord disappears or becomes highly modified. In some non-vertebrate chordates and fishes the notochord persists as a laterally flexible but incompressible skeletal rod that prevents telescopic collapse of the body during swimming[TOLWEB]

axiom_lost_from_external_ontology

relationship type change: differentiates_from mesoderm (AAO:0000304) CHANGED TO: develops_from mesoderm (UBERON:0000926)[AAO]

contributor

https://github.com/cmungall

https://github.com/wdahdul

database_cross_reference

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C12463

http://linkedlifedata.com/resource/umls/id/C0028439

http://www.snomedbrowser.com/Codes/Details/308820002

http://en.wikipedia.org/wiki/Notochord

http://evolution.berkeley.edu/evolibrary/images/history/notochords.jpg

UMLS:C0028439

CALOHA:TS-0690

AAO:0000327

MAT:0000281

MESH:A16.254.610

GAID:1311

BTO:0001768

FMA:85521

EHDAA2:0001277

TAO:0000135

VSAO:0000032

VHOG:0000199

EV:0100002

EHDAA:6021

XAO:0000055

EHDAA:1241

ZFA:0000135

EMAPA:16191

definition

A flexible rod-shaped body found in embryos of all chordates. It is composed of cells derived from the mesoderm and defines the primitive axis of the embryo. In some chordates, it persists throughout life as the main axial support of the body, while in most vertebrates it becomes the nucleus pulposus of the intervertebral disc. The notochord is found ventral to the neural tube.

depicted_by

http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png

development_notes

In between vertebra the notochord becomes the nucleus pulposus, under it degenerates, and at anterior end in some species its tissue merges with some of the cranial bones.. Some organisms retain a post-embryonic notochord.

develops_from

http://purl.obolibrary.org/obo/UBERON_0006267

http://purl.obolibrary.org/obo/UBERON_0004880

dorsal_to

http://purl.obolibrary.org/obo/UBERON_0001555

existence starts during

http://purl.obolibrary.org/obo/UBERON_0000068

existence starts during or after

http://purl.obolibrary.org/obo/UBERON_0000068

external_definition

Rod-like principal supportive element of the embryo and larva, present in the midline just ventral to the neural tube, and differentiating during the segmentation period to form large vacuolated epithelial cells and a surrounding a sheath of fibrous and elastic layers. Layering of the sheath may differ in structure, thickness and development among groups; in cypriniforms there are actually three very thin layers to the sheath. A functional, well developed notochord is present throughout life in certain basal fish groups but not in cypriniforms. Kimmel et al, 1995.[TAO]

Avascular multi-tissue structure composed of large vacuolated epithelial cells (chordablasts) and perichordal fibrous tissue.[VSAO]

Slender rod of fibrous connective tissue surrounding a core of fluid-filled cells of mesodermal origin; it lies above the gut and directly beneath the spinal cord. The notochord is present during early development and in a few cases it is retained through life; however, usually the notochord is replaced by the vertebral column.[AAO]

has_exact_synonym

notocord

embryonic notocord

has_obo_namespace

uberon

has_related_synonym

notochorda

has_relational_adjective

notochordal

homology_notes

(...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (3) a stiff, longitudinal rod of turgid cells along the dorsal part of the body that is called a notochord (...).[well established][VHOG]

id

UBERON:0002328

imported from

http://purl.obolibrary.org/obo/oae.owl

http://purl.obolibrary.org/obo/uberon.owl

in_subset

http://purl.obolibrary.org/obo/uberon#uberon_slim

http://purl.obolibrary.org/obo/uberon/core#vertebrate_core

http://purl.obolibrary.org/obo/uberon#vertebrate_core

http://purl.obolibrary.org/obo/uberon/core#pheno_slim

http://purl.obolibrary.org/obo/uberon/core#uberon_slim

label

notochord

notation

UBERON:0002328

part_of

http://purl.obolibrary.org/obo/UBERON_0011137

prefLabel

notochord

treeView

http://purl.obolibrary.org/obo/UBERON_0006267

http://purl.obolibrary.org/obo/UBERON_0004880

http://purl.obolibrary.org/obo/UBERON_0011137

ventral_to

http://purl.obolibrary.org/obo/UBERON_0001049

subClassOf

http://purl.obolibrary.org/obo/UBERON_0000481

http://purl.obolibrary.org/obo/UBERON_0004120

http://purl.obolibrary.org/obo/UBERON_0004121

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Mapping To Ontology Source
http://purl.obolibrary.org/obo/UBERON_0002328 UBERON SAME_URI
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http://purl.obolibrary.org/obo/UBERON_0002328 CLO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002328 INBANCIDO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002328 OHPI SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002328 GCBO SAME_URI
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http://purl.obolibrary.org/obo/UBERON_0002328 FOVT SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002328 OCMR SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002328 OPMI SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002328 RBO SAME_URI
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http://purl.obolibrary.org/obo/UBERON_0002328 GO-PLUS SAME_URI
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http://purl.obolibrary.org/obo/UBERON_0002328 NBO SAME_URI
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http://purl.obolibrary.org/obo/UBERON_0002328 ODAE SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002328 UPHENO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002328 OCVDAE SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002328 NIFSTD SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002328 ECAO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002328 KTAO SAME_URI
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http://purl.obolibrary.org/obo/UBERON_0002328 NMDCO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002328 UBERON LOOM
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http://purl.obolibrary.org/obo/EMAPA_16191 EMAPA LOOM
http://purl.obolibrary.org/obo/EHDAA_6021 EHDAA LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C12463 NCIT LOOM
http://purl.obolibrary.org/obo/OMIT_0010691 OMIT LOOM
http://purl.obolibrary.org/obo/EHDAA2_0001277 EHDAA2 LOOM
http://purl.bioontology.org/ontology/SNMI/T-F6410 SNMI LOOM
http://purl.org/obo/owlapi/fma#FMA_85521 BIOMODELS LOOM
http://purl.obolibrary.org/obo/VHOG_0000199 VHOG LOOM
http://purl.obolibrary.org/obo/PhfumiA_0000665 PHFUMIADO LOOM
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http://purl.obolibrary.org/obo/EHDA_4319 EHDA LOOM
http://purl.obolibrary.org/obo/HaauraA_0000665 HAAURAADO LOOM
http://bioportal.bioontology.org/ontologies/FISHO#FISHO_0000045 FISHO LOOM
http://purl.obolibrary.org/obo/TAO_0000135 TAO LOOM
http://purl.obolibrary.org/obo/MFO_0002120 MFO LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D009672 RH-MESH LOOM
http://purl.obolibrary.org/obo/BTO_0001768 BTO LOOM
http://purl.obolibrary.org/obo/MAT_0000281 MAT LOOM
http://purl.obolibrary.org/obo/EHDA_3329 EHDA LOOM
http://purl.obolibrary.org/obo/MooculA_0000665 MOOCULADO LOOM
http://purl.obolibrary.org/obo/EHDA_6022 EHDA LOOM
http://purl.bioontology.org/ontology/MESH/D009672 MESH LOOM
http://purl.obolibrary.org/obo/HaroreA_0000665 HAROREADO LOOM
http://purl.obolibrary.org/obo/VSAO_0000032 VSAO LOOM
http://purl.obolibrary.org/obo/VSAO_0000032 TAO LOOM
http://www.projecthalo.com/aura#Notochord AURA LOOM
http://purl.obolibrary.org/obo/CisaviA_0000665 CISAVIADO LOOM
http://purl.obolibrary.org/obo/EHDA_9520 EHDA LOOM
http://purl.obolibrary.org/obo/EHDA_8342 EHDA LOOM
http://purl.jp/bio/4/id/200906083217385171 IOBC LOOM
http://purl.obolibrary.org/obo/NCIT_C12463 BERO LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0028439 OCHV LOOM
http://purl.obolibrary.org/obo/EHDAA_1241 EHDAA LOOM
http://purl.obolibrary.org/obo/XAO_0000055 XPO LOOM
http://purl.obolibrary.org/obo/XAO_0000055 XAO LOOM
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http://purl.obolibrary.org/obo/MooccuA_0000665 MOOCCUADO LOOM
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http://purl.obolibrary.org/obo/ZFA_0000135 ZP LOOM
http://purl.obolibrary.org/obo/PhmammA_0000665 PHMAMMADO LOOM
http://purl.obolibrary.org/obo/EHDA_10615 EHDA LOOM
http://purl.obolibrary.org/obo/EHDA_2536 EHDA LOOM
http://purl.obolibrary.org/obo/UBERON_0002328 OAE LOOM
http://purl.obolibrary.org/obo/UBERON_0002328 PDRO LOOM
http://purl.obolibrary.org/obo/UBERON_0002328 CLO LOOM
http://purl.obolibrary.org/obo/UBERON_0002328 INBANCIDO LOOM
http://purl.obolibrary.org/obo/UBERON_0002328 OHPI LOOM
http://purl.obolibrary.org/obo/UBERON_0002328 GCBO LOOM
http://purl.obolibrary.org/obo/UBERON_0002328 CCONT LOOM
http://purl.obolibrary.org/obo/UBERON_0002328 FOVT LOOM
http://purl.obolibrary.org/obo/UBERON_0002328 OCMR LOOM
http://purl.obolibrary.org/obo/UBERON_0002328 OPMI LOOM
http://purl.obolibrary.org/obo/UBERON_0002328 RBO LOOM
http://purl.obolibrary.org/obo/UBERON_0002328 EFO LOOM
http://purl.obolibrary.org/obo/UBERON_0002328 XPO LOOM
http://purl.obolibrary.org/obo/UBERON_0002328 PCL LOOM
http://purl.obolibrary.org/obo/UBERON_0002328 PATO LOOM
http://purl.obolibrary.org/obo/UBERON_0002328 NIFDYS LOOM
http://purl.obolibrary.org/obo/UBERON_0002328 GO-PLUS LOOM
http://purl.obolibrary.org/obo/UBERON_0002328 NBO LOOM
http://purl.obolibrary.org/obo/UBERON_0002328 HHEAR LOOM
http://purl.obolibrary.org/obo/UBERON_0002328 ODAE LOOM
http://purl.obolibrary.org/obo/UBERON_0002328 UPHENO LOOM
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http://purl.obolibrary.org/obo/UBERON_0002328 NIFSTD LOOM
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http://purl.obolibrary.org/obo/UBERON_0002328 FNS-H LOOM
http://purl.obolibrary.org/obo/UBERON_0002328 AISM LOOM
http://purl.obolibrary.org/obo/UBERON_0002328 NMDCO LOOM