loading...| Preferred Name | somite | |
| Synonyms |
somites epimere somitus epimere mesoderm epithelial somite somitic mesoderm mesodermal cluster |
|
| Definitions |
Somites are spheres of epithelial cells that form sequentially along the anterior-posterior axis of the embryo through mesenchymal to epithelial transition of the presomitic mesoderm. When the somite becomes segmented from the segmental plate, it is composed of an epithelial sac enclosing mesenchymal somitocoel cells. Thereafter the somite differentiates into two parts, the ventro-medial mesenchymal sclerotome and the dorso-lateral epithelial dermomyotome. This change in the epithelial somite depends on surrounding tissue [PMID:15906248] |
|
| ID |
http://purl.obolibrary.org/obo/UBERON_0002329 |
|
| comment |
When the somite becomes segmented from the segmental plate, it is composed of an epithelial sac enclosing mesenchymal somitocoel cells. Thereafter the somite differentiates into two parts, the ventro-medial mesenchymal sclerotome and the dorso-lateral epithelial dermomyotome. This change in the epithelial somite depends on surrounding tissue [PMID:15906248] |
|
| axiom_lost_from_external_ontology |
relationship loss: develops_from paraxial mesenchyme (TAO:0000942)[TAO] relationship type change: part_of paraxial mesoderm (AAO:0010568) CHANGED TO: develops_from paraxial mesoderm (UBERON:0003077)[AAO] relationship type change: OBO_REL:part_of trunk (TAO:0001115) CHANGED TO: develops_from trunk (UBERON:0002100)[TAO] |
|
| database_cross_reference |
http://linkedlifedata.com/resource/umls/id/C0376449 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C34302 http://en.wikipedia.org/wiki/Somite AAO:0010569 VHOG:0000191 BTO:0001558 AEO:0001015 EHDAA:366 TAO:0000155 MIAA:0000068 UMLS:C0376449 XAO:0000058 MAT:0000068 EMAPA:31169 MESH:A16.254.425.660.750 EHDAA2:0003436 ZFA:0000155 GAID:1306 FMA:85522 EHDAA:699 |
|
| definition |
Somites are spheres of epithelial cells that form sequentially along the anterior-posterior axis of the embryo through mesenchymal to epithelial transition of the presomitic mesoderm. |
|
| depicted_by |
http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png |
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| develops_from | ||
| editor note |
currently classified as an epithelial vesicle, consistent with EHDAA2 and https://github.com/obophenotype/uberon/wiki/The-neural-crest. Consider making 'somitic mesoderm' a separate term and correlate with regionalization processes. Consider moving ZFA term to 'trunk somite' as it is part of the trunk |
|
| external_definition |
Undifferentiated mesodermal components of early trunk or tail segments or metameres, derived from paraxial mesoderm; forms myotomes, sclerotomes and perhaps dermatomes. Kimmel et al, 1995.[TAO] Post-cranial axial segments which form sclerotome and dermomyotome.[AAO] |
|
| has_broad_synonym |
mesodermal cluster |
|
| has_obo_namespace |
uberon |
|
| has_related_synonym |
somites epimere somitus epimere mesoderm epithelial somite somitic mesoderm |
|
| has_relational_adjective |
somitic |
|
| homology_notes |
(...) cephalocordates and craniates belong to a group known as Somitichordata. Somitichordate synapomorphies include (1) somites (...) (reference 1); The idea that the last common ancestor of bilaterian animals (Urbilateria) was segmented has been raised recently on evidence coming from comparative molecular embryology (reference 2).[well established][VHOG] |
|
| id |
UBERON:0002329 |
|
| imported from | ||
| in_subset |
http://purl.obolibrary.org/obo/uberon#uberon_slim http://purl.obolibrary.org/obo/uberon/core#vertebrate_core http://purl.obolibrary.org/obo/uberon#vertebrate_core |
|
| label |
somite |
|
| never in taxon | ||
| notation |
UBERON:0002329 |
|
| prefLabel |
somite |
|
| treeView | ||
| subClassOf |
http://purl.obolibrary.org/obo/UBERON_0007503 |