NMDC Ontology

Last uploaded: March 15, 2024
Preferred Name

duodenum
Synonyms

proximal intestine

upper intestine

Definitions

The first part of the small intestine. At the junction of the stomach and the duodenum the alimentary canal is inflected. The duodenum first goes anteriorly for a short distance, turns dorsally, and eventually caudally, thus it is a U-shaped structure with two horizontal sections (a ventral and a dorsal one).

ID

http://purl.obolibrary.org/obo/UBERON_0002114

alternative term

proximal intestine

upper intestine

continuous with

http://purl.obolibrary.org/obo/UBERON_0001166

contributes to morphology of

http://purl.obolibrary.org/obo/UBERON_0002108

database_cross_reference

galen:Duodenum

UMLS:C0013303

EMAPA:18852

MAT:0000044

MIAA:0000044

VHOG:0000052

AAO:0010402

CALOHA:TS-0214

SCTID:181247007

NCIT:C12263

MESH:D004386

EFO:0000851

Wikipedia:Duodenum

XAO:0000236

BTO:0000365

EV:0100073

FMA:7206

GAID:284

MA:0000338

definition

The first part of the small intestine. At the junction of the stomach and the duodenum the alimentary canal is inflected. The duodenum first goes anteriorly for a short distance, turns dorsally, and eventually caudally, thus it is a U-shaped structure with two horizontal sections (a ventral and a dorsal one).

depiction

https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Small_Intestine.glb

http://upload.wikimedia.org/wikipedia/commons/b/b3/Tractus_intestinalis_duodenum.svg

https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Small_Intestine.glb

has_obo_namespace

uberon

has_related_synonym

proximal intestine

upper intestine

id

UBERON:0002114

in_subset

http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas

http://purl.obolibrary.org/obo/uberon/core#efo_slim

http://purl.obolibrary.org/obo/uberon/core#vertebrate_core

http://purl.obolibrary.org/obo/uberon/core#pheno_slim

http://purl.obolibrary.org/obo/uberon/core#uberon_slim

label

duodenum

never in taxon

http://purl.obolibrary.org/obo/NCBITaxon_7955

notation

UBERON:0002114

overlaps

http://purl.obolibrary.org/obo/UBERON_0002108

part of

http://purl.obolibrary.org/obo/UBERON_0002108

part_of

http://purl.obolibrary.org/obo/UBERON_0002108

prefLabel

duodenum

present in taxon

http://purl.obolibrary.org/obo/NCBITaxon_9606

proximalmost part of

http://purl.obolibrary.org/obo/UBERON_0002108

treeView

http://purl.obolibrary.org/obo/UBERON_0002108

UBPROP_0000001

The fixed portion of the small intestine deeply lodged in the posterior wall of the abdomen and extending from the pylorus to the beginning of the jejunum. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]

UBPROP_0000007

duodenal

UBPROP_0000008

In fish, the divisions of the small intestine are not as clear, and the terms anterior intestine or proximal intestine may be used instead of duodenum.

In humans, the duodenum is a hollow jointed tube about 10-15 inches (25-38 centimetres) long connecting the stomach to the jejunum. It begins with the duodenal bulb and ends at the ligament of Treitz.

subClassOf

http://purl.obolibrary.org/obo/UBERON_0004921

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Delete Mapping To Ontology Source
http://purl.obolibrary.org/obo/UBERON_0002114 CL SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002114 OAE SAME_URI
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http://purl.obolibrary.org/obo/UBERON_0002114 HOIP SAME_URI
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http://purl.obolibrary.org/obo/UBERON_0002114 EFO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002114 DOID SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002114 HSO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002114 PCL SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002114 MONDO SAME_URI
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urn:absolute:RadiationOncologyStructuresOntology#Duodenum ROS LOOM
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http://purl.jp/bio/11/meo/MEO_0000487 MEO LOOM
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http://purl.obolibrary.org/obo/MA_0000338 MA LOOM
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http://purl.obolibrary.org/obo/UBERON_0002114 CLO LOOM
http://purl.obolibrary.org/obo/UBERON_0002114 GCBO LOOM
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http://purl.obolibrary.org/obo/UBERON_0002114 FOVT LOOM
http://purl.obolibrary.org/obo/UBERON_0002114 OCMR LOOM
http://purl.obolibrary.org/obo/UBERON_0002114 HOIP LOOM
http://purl.obolibrary.org/obo/UBERON_0002114 DTO LOOM
http://purl.obolibrary.org/obo/UBERON_0002114 RBO LOOM
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http://purl.obolibrary.org/obo/UBERON_0002114 EFO LOOM
http://purl.obolibrary.org/obo/UBERON_0002114 DOID LOOM
http://purl.obolibrary.org/obo/UBERON_0002114 HSO LOOM
http://purl.obolibrary.org/obo/UBERON_0002114 PCL LOOM
http://purl.obolibrary.org/obo/UBERON_0002114 BAO LOOM
http://purl.obolibrary.org/obo/UBERON_0002114 NIFDYS LOOM
http://purl.obolibrary.org/obo/UBERON_0002114 GO-PLUS LOOM
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http://purl.obolibrary.org/obo/UBERON_0002114 HRA LOOM
http://purl.obolibrary.org/obo/UBERON_0002114 UPHENO LOOM
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