Biological and Environmental Research Ontology

Last uploaded: December 23, 2022
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Preferred Name

Brain Stem
Synonyms
Definitions

Three sections, the midbrain, pons and medulla oblongata, that are located at the base of the brain. The brain stem regulates the central nervous system, and is vital as a conduit for motor and sensory innervations.
ID

http://purl.obolibrary.org/obo/NCIT_C12441
ALT_DEFINITION

The part of the brain that connects the cerebral hemispheres with the spinal cord. It consists of the mesencephalon, pons, and medulla oblongata. (NCI)

The part of the brain that is connected to the spinal cord.
code

C12441
Contributing_Source

CDISC

DIPG/DMG

GDC
definition

Three sections, the midbrain, pons and medulla oblongata, that are located at the base of the brain. The brain stem regulates the central nervous system, and is vital as a conduit for motor and sensory innervations.
Display_Name

Brain Stem
in_subset

http://purl.obolibrary.org/obo/NCIT_C183102

http://purl.obolibrary.org/obo/NCIT_C77529

http://purl.obolibrary.org/obo/NCIT_C77526

http://purl.obolibrary.org/obo/NCIT_C177537

http://purl.obolibrary.org/obo/NCIT_C74456

http://purl.obolibrary.org/obo/NCIT_C66830

http://purl.obolibrary.org/obo/NCIT_C157711

http://purl.obolibrary.org/obo/NCIT_C61410
Is_Value_For_GDC_Property

http://purl.obolibrary.org/obo/NCIT_C177570

http://purl.obolibrary.org/obo/NCIT_C156422

http://purl.obolibrary.org/obo/NCIT_C156421

http://purl.obolibrary.org/obo/NCIT_C70729

http://purl.obolibrary.org/obo/NCIT_C171435
label

Brain Stem
Legacy Concept Name

Brain_Stem
Maps_To

Brain Stem

Brain stem
Preferred_Name

Brain Stem
prefixIRI

NCIT:C12441
prefLabel

Brain Stem
Semantic_Type

Body Part, Organ, or Organ Component
UMLS_CUI

C0006121
subClassOf

http://purl.obolibrary.org/obo/NCIT_C13031
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Delete Mapping To Ontology Source
http://doe-generated-ontology.com/OntoAD#C0006121 ONTOAD LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 CL LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 UBERON LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 RBO LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 HRA LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 GO-PLUS LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 CLO LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 DOID LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 EFO LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 OBA LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 MAXO LOOM
http://neuromorpho.org/ontologies/vertebrateH.owl#NMOBr_176 NMOBR LOOM
https://explaination.net/onto/tree-structure-brain-anatomy-FastSurfer#Brainstem BRAIN-COF LOOM
http://purl.obolibrary.org/obo/VHOG_0001457 VHOG LOOM
http://www.semanticweb.org/rjyy/ontologies/2015/5/ESSO#Brain_Stem ESSO LOOM
http://www.semanticweb.org/rjyy/ontologies/2015/5/ESSO#Brain_Stem MEPO LOOM
http://purl.bioontology.org/ontology/LNC/LP207337-9 LOINC LOOM
http://www.semanticweb.org/ontologies/2009/3/ontoDPN.owl#OPPIO_a000307 EPO LOOM
http://scai.fraunhofer.de/AlzheimerOntology#brainstem NIO LOOM
http://purl.obolibrary.org/obo/EMAPA_32678 EMAPA LOOM
http://ontology.apa.org/apaonto/termsonlyOUT%20(5).owl#Brain_Stem APANEUROCLUSTER LOOM
http://ontology.apa.org/apaonto/termsonlyOUT%20(5).owl#Brain_Stem APAONTO LOOM
http://uri.interlex.org/fsl/uris/atlases/HarvardOxford-Subcortical/labels/7 NIFSTD LOOM
http://api.brain-map.org/api/v2/data/Structure/343 NPOKB LOOM
http://api.brain-map.org/api/v2/data/Structure/343 NIFSTD LOOM
http://www.semanticweb.org/ontologies/STO.owl#b50fc8_8c7a_43cd_8dfc_e287c4b7c010 STO-DRAFT LOOM
http://www.semanticweb.org/ontologies/STO.owl#b50fc8_8c7a_43cd_8dfc_e287c4b7c010 CVAO LOOM
http://purl.bioontology.org/ontology/RCD/7N005 RCD LOOM
http://www.owl-ontologies.com/OntologyXCT.owl#Brainstem CTX LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0006121 OCHV LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D001933 RH-MESH LOOM
http://purl.obolibrary.org/obo/MA_0000169 MA LOOM
http://purl.org/obo/owlapi/fma#FMA_79876 BIOMODELS LOOM
http://www.projecthalo.com/aura#Brainstem AURA LOOM
http://purl.obolibrary.org/obo/BTO_0000146 DTO LOOM
http://purl.obolibrary.org/obo/BTO_0000146 BTO LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#2142 OCHV LOOM
http://purl.org/sig/ont/fma/fma79876 FMA LOOM
http://purl.org/sig/ont/fma/fma79876 ROO LOOM
http://purl.bioontology.org/ontology/SNMI/T-A2050 SNMI LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 NPOKB LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 OAE LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 OVAE LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 OHPI LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 GCBO LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 FOVT LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 OCMR LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 HOIP LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 XPO LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 PCL LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 PATO LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 NIFDYS LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 EPIO LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 NBO LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 HHEAR LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 ODAE LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 UPHENO LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 OCVDAE LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 NIFSTD LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 KTAO LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 FNS-H LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 AISM LOOM
http://purl.obolibrary.org/obo/UBERON_0002298 NMDCO LOOM
http://purl.bioontology.org/ontology/CSP/0476-5401 CRISP LOOM
http://www.co-ode.org/ontologies/galen#Brainstem GALEN LOOM
http://www.purl.org/NDDO/NDDO_20001006 NDDO LOOM
http://purl.obolibrary.org/obo/FMA_79876 NIO LOOM
urn:absolute:RadiationOncologyStructuresOntology#Brainstem ROS LOOM
http://www.semanticweb.org/ontologies/2012/11/abnormalities.owl#phenodb:1813 IFAR LOOM
http://www.ustb.edu.cn/thesauri/tocr/v1/data#C571346494750191618 ACVD_ONTOLOGY LOOM
http://purl.obolibrary.org/obo/ZFA_0001707 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0001707 UPHENO LOOM
http://purl.obolibrary.org/obo/ZFA_0001707 ZP LOOM
http://purl.jp/bio/4/id/200906076160033323 IOBC LOOM
http://regenbase.org/ontology#RB_0000505 RB LOOM
http://scai.fraunhofer.de/MSOntology#Brainstem MSO LOOM
http://purl.obolibrary.org/obo/TAO_0002156 TAO LOOM
http://mouse.brain-map.org/atlas/index.html#BS ABA-AMB LOOM
http://www.ifomis.org/acgt/1.0#Brainstem ACGT-MO LOOM
http://bioontology.org/projects/ontologies/birnlex#birnlex_1565 BIRNLEX LOOM
http://purl.obolibrary.org/obo/OMIT_0003289 OMIT LOOM
http://uri.neuinfo.org/nif/nifstd/birnlex_1565 NIFSTD LOOM
http://www.semanticweb.org/ontologies/2009/9/Ontology1255357986125.owl#Brainstem BRCT LOOM
http://radlex.org/RID/RID6677 RADLEX LOOM
http://localhost/plosthes.2017-1#1507 PLOSTHES LOOM
http://uri.interlex.org/waxholm/uris/sd/labels/47 NIFSTD LOOM
http://purl.bioontology.org/ontology/MESH/D001933 MESH LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#A08.186.211.132 RH-MESH LOOM
http://id.nlm.nih.gov/mesh/D001933 MDM LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C12441 NCIT LOOM