PMO Precision Medicine Ontology

Last uploaded: December 16, 2020
Preferred Name

Actin Filament

Synonyms
Definitions

"A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane." [GOC:mah, ISBN:0198506732, PMID:10666339]

ID

http://www.phoc.org.cn/pmo/class/PMO_00054724

Database_Cross_Reference

GO:0005884

Definition

"A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane." [GOC:mah, ISBN:0198506732, PMID:10666339]

Gene Annotation

RCSD1(UniProtKB:Q6JBY9)

AIF1L(UniProtKB:Q9BQI0)

VPS18(UniProtKB:Q9P253)

PALLD(UniProtKB:Q8WX93)

PLS3(UniProtKB:P13797)

RAC1(UniProtKB:P63000)

TPM3(UniProtKB:P06753)

LMOD1(UniProtKB:P29536)

FMN1(UniProtKB:Q68DA7)

RAC2(UniProtKB:P15153)

PLS1(UniProtKB:Q14651)

TEK(UniProtKB:Q02763)

IQGAP1(UniProtKB:P46940)

MYO6(UniProtKB:Q9UM54)

GDPD2(UniProtKB:Q9HCC8)

TMOD1(UniProtKB:P28289)

WASL(UniProtKB:O00401)

AMOT(UniProtKB:Q4VCS5)

ACKR2(UniProtKB:O00590)

DMTN(UniProtKB:Q08495)

POF1B(UniProtKB:Q8WVV4)

MISP(UniProtKB:Q8IVT2)

ACTN3(UniProtKB:Q08043)

DAPK3(UniProtKB:O43293)

AKAP13(UniProtKB:Q12802)

TWF1(UniProtKB:Q12792)

FYN(UniProtKB:P06241)

ACTA1(UniProtKB:P68133)

MYO9B(UniProtKB:Q13459)

CORO1B(UniProtKB:Q9BR76)

LCP1(UniProtKB:P13796)

FKBP15(UniProtKB:Q5T1M5)

TIGD5(UniProtKB:Q53EQ6)

WIPF3(UniProtKB:A6NGB9)

PAWR(UniProtKB:Q96IZ0)

MYO5A(UniProtKB:Q9Y4I1)

WIPF1(UniProtKB:O43516)

ACTN2(UniProtKB:P35609)

EZR(UniProtKB:P15311)

MYO1B(UniProtKB:O43795)

WHRN(UniProtKB:Q9P202)

GAS2(UniProtKB:O43903)

ACTN1(UniProtKB:P12814)

WIPF2(UniProtKB:Q8TF74)

TWF2(UniProtKB:Q6IBS0)

ACTC1(UniProtKB:P68032)

PSTPIP1(UniProtKB:O43586)

TPM4(UniProtKB:P67936)

TSC1(UniProtKB:Q92574)

GAS7(UniProtKB:O60861)

SHROOM4(UniProtKB:Q9ULL8)

FLNA(UniProtKB:P21333)

POTEKP(UniProtKB:Q9BYX7)

LMOD2(UniProtKB:Q6P5Q4)

WAS(UniProtKB:P42768)

COBL(UniProtKB:O75128)

CTTN(UniProtKB:Q14247)

GNG12(UniProtKB:Q9UBI6)

MARK2(UniProtKB:Q7KZI7)

ACTG1(UniProtKB:P63261)

CORO1A(UniProtKB:P31146)

RHOQ(UniProtKB:P17081)

HCK(UniProtKB:P08631)

TPM2(UniProtKB:P07951)

DNAJA3(UniProtKB:Q96EY1)

TPM1(UniProtKB:P09493)

SH2B2(UniProtKB:O14492)

KEAP1(UniProtKB:Q14145)

BIN3(UniProtKB:Q9NQY0)

ANXA1(UniProtKB:P04083)

APC2(UniProtKB:O95996)

AIF1(UniProtKB:P55008)

PAK1(UniProtKB:Q13153)

ARHGAP6(UniProtKB:O43182)

SRC(UniProtKB:P12931)

PSTPIP2(UniProtKB:Q9H939)

YES1(UniProtKB:P07947)

label

Actin Filament

MCID

MC04787814

PMOID

PMO:00054724

prefixIRI

pmo:PMO_00054724

prefLabel

Actin Filament

Synonym

"microfilament" EXACT []

Tree Number

T10.3.7.100.34.16.12.4

T10.3.14.13.16.12.4

T10.3.18.4.2.4.4

subClassOf

http://www.phoc.org.cn/pmo/class/PMO_00054701

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Delete Mapping To Ontology Source
http://purl.obolibrary.org/obo/GO_0005884 GO-PLUS LOOM
http://purl.obolibrary.org/obo/GO_0005884 CL LOOM
http://purl.obolibrary.org/obo/GO_0005884 HOIP LOOM
http://purl.obolibrary.org/obo/GO_0005884 UBERON LOOM
http://purl.obolibrary.org/obo/GO_0005884 PATO LOOM
http://purl.obolibrary.org/obo/GO_0005884 OBA LOOM
http://purl.obolibrary.org/obo/GO_0005884 XPO LOOM
http://purl.obolibrary.org/obo/GO_0005884 FYPO LOOM
http://purl.obolibrary.org/obo/GO_0005884 GO LOOM
http://purl.obolibrary.org/obo/GO_0005884 ZP LOOM
http://purl.obolibrary.org/obo/XAO_0005319 XPO LOOM
http://purl.obolibrary.org/obo/GO_0005884 NIGO LOOM
http://purl.obolibrary.org/obo/GO_0005884 RBO LOOM
http://purl.obolibrary.org/obo/GO_0005884 GO-EXT LOOM
http://purl.obolibrary.org/obo/GO_0005884 FOVT LOOM
http://purl.obolibrary.org/obo/GO_0005884 CCO LOOM
http://purl.obolibrary.org/obo/GO_0005884 REXO LOOM
http://purl.obolibrary.org/obo/GO_0005884 GEXO LOOM
http://purl.obolibrary.org/obo/GO_0005884 PHAGE LOOM
http://purl.obolibrary.org/obo/GO_0005884 CMPO LOOM
http://purl.obolibrary.org/obo/GO_0005884 PCL LOOM
http://purl.obolibrary.org/obo/GO_0005884 NIFDYS LOOM
http://purl.obolibrary.org/obo/GO_0005884 BERO LOOM
http://purl.obolibrary.org/obo/GO_0005884 NBO LOOM
http://purl.obolibrary.org/obo/GO_0005884 HHEAR LOOM
http://purl.obolibrary.org/obo/GO_0005884 UPHENO LOOM
http://purl.obolibrary.org/obo/GO_0005884 NIFSTD LOOM
http://purl.obolibrary.org/obo/GO_0005884 KTAO LOOM
http://purl.obolibrary.org/obo/GO_0005884 REGN_GO LOOM
http://purl.obolibrary.org/obo/GO_0005884 RETO LOOM
http://purl.obolibrary.org/obo/GO_0005884 MAXO LOOM
http://purl.obolibrary.org/obo/GO_0005884 AISM LOOM
http://purl.obolibrary.org/obo/GO_0005884 NMDCO LOOM
http://purl.org/obo/owl/GO#GO_0005884 BIOMODELS LOOM
http://regenbase.org/ontology#RB_0000242 RB LOOM
http://purl.org/obo/owlapi/fma#FMA_63850 BIOMODELS LOOM
http://purl.obolibrary.org/obo/ECAO_0104430 ECAO LOOM
http://uri.neuinfo.org/nif/nifstd/sao1588493326 NIFSTD LOOM
http://purl.obolibrary.org/obo/NCIT_C13255 BERO LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C13255 NCIT LOOM
http://ccdb.ucsd.edu/SAO/1.2#sao1588493326 SAO LOOM
http://purl.org/sig/ont/fma/fma63850 FMA LOOM
http://purl.obolibrary.org/obo/XAO_0005319 UPHENO LOOM
http://purl.obolibrary.org/obo/XAO_0005319 XAO LOOM
http://purl.jp/bio/4/id/200906094529075546 IOBC LOOM
http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Subcellular.owl#sao1588493326 NIFSUBCELL LOOM