Uber Anatomy Ontology

Last uploaded: May 13, 2024
Preferred Name

digestive tract

Synonyms

digestive tube

enteric tract

gut

alimentary tract

alimentary canal

digestive canal

gut tube

Definitions

A tube extending from the mouth to the anus.

ID

http://purl.obolibrary.org/obo/UBERON_0001555

connects

http://purl.obolibrary.org/obo/UBERON_0000165

database_cross_reference

WBbt:0005743

TGMA:0001819

EHDAA2:0000726

MESH:D041981

VHOG:0000309

TAO:0000112

BTO:0000545

galen:AlimentaryTract

NCIT:C34082

UMLS:C0017189

FBbt:00003125

BTO:0000511

ZFA:0000112

BILA:0000083

AAO:0010023

EMAPA:16247

EHDAA:518

FMA:45615

MA:0000917

definition

A tube extending from the mouth to the anus.

develops_from

http://purl.obolibrary.org/obo/UBERON_0007026

external_definition

The alimentary or digestive tract, and associated organs.[TAO]

external_ontology_notes

we place the MA and EMAPA class here, although the intent is probably a smaller region. See https://github.com/obophenotype/uberon/issues/509

FMA also has a term 'gastrointestinal tract', but this includes the liver.

has_broad_synonym

gut

has_exact_synonym

digestive tube

enteric tract

has_narrow_synonym

alimentary tract

alimentary canal

has_obo_namespace

uberon

has_related_synonym

digestive canal

gut tube

homology_notes

The bilaterian gut is typically a complete tube that opens to the exterior at both ends. It consists of mouth, foregut, midgut, hindgut, and anus (reference 1); Although all vertebrates have a digestive tract and accessory glands, various parts of this system are not necessarily homologous, analogous, or even present in all species. Therefore, broad comparisons can be best made under the listings of headgut, foregut, midgut, pancreas and biliary system, hindgut (reference 2).[well established][VHOG]

id

UBERON:0001555

immediate transformation of

http://purl.obolibrary.org/obo/UBERON_0007026

in_subset

http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas

http://purl.obolibrary.org/obo/uberon/core#vertebrate_core

http://purl.obolibrary.org/obo/uberon/core#uberon_slim

label

digestive tract

never_in_taxon

http://purl.obolibrary.org/obo/NCBITaxon_41324

http://purl.obolibrary.org/obo/NCBITaxon_147099

notation

UBERON:0001555

only in taxon

http://purl.obolibrary.org/obo/NCBITaxon_6072

part_of

http://purl.obolibrary.org/obo/UBERON_0001007

prefLabel

digestive tract

present_in_taxon

http://purl.obolibrary.org/obo/NCBITaxon_9606

terminology_notes

we following Kardong in naming the entire tube from mouth to anus the alimentary canal. Kardong calls the portion of this tract that excludes buccal cavity and pharynx the 'alimentary canal', consider adding an extra class for this

treeView

http://purl.obolibrary.org/obo/UBERON_0007026

http://purl.obolibrary.org/obo/UBERON_0001007

subClassOf

http://purl.obolibrary.org/obo/UBERON_0000025

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Delete Mapping To Ontology Source
http://purl.obolibrary.org/obo/UBERON_0001555 RBO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 MONDO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 MAXO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 FOODON SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 NPOKB SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 CL SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 OAE SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 RBO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 PDRO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 CLO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 OBI SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 INBANCIDO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 OVAE SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 OHPI SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 GCBO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 FOVT SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 OCMR SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 EFO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 OPMI SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 XPO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 GO-PLUS SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 PCL SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 MONDO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 PATO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 NIFDYS SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 CTENO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 BERO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 CEPH SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 NBO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 HHEAR SAME_URI
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http://purl.obolibrary.org/obo/UBERON_0001555 ODAE SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 CIDO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 UPHENO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 OCVDAE SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 NIFSTD SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 KTAO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 LEPAO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 COLAO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 GENEPIO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 MAXO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 CCF SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 ENVO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 FNS-H SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 AISM SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 NMDCO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001555 RBO LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 MAXO LOOM
http://purl.obolibrary.org/obo/WBbt_0005743 WB-BT LOOM
http://purl.obolibrary.org/obo/WBbt_0005743 UPHENO LOOM
urn:absolute:RadiationOncologyStructuresOntology#Digestive_Tract ROS LOOM
http://purl.obolibrary.org/obo/XAO_0005501 XPO LOOM
http://purl.obolibrary.org/obo/XAO_0005501 UPHENO LOOM
http://purl.obolibrary.org/obo/XAO_0005501 XAO LOOM
http://www.projecthalo.com/aura#Digestive-Tract AURA LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 FOODON LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 NPOKB LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 CL LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 OAE LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 RBO LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 PDRO LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 CLO LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 OBI LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 INBANCIDO LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 OVAE LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 OHPI LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 GCBO LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 FOVT LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 OCMR LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 EFO LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 OPMI LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 XPO LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 GO-PLUS LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 PCL LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 PATO LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 NIFDYS LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 CTENO LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 CEPH LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 NBO LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 HHEAR LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 OBA LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 ODAE LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 CIDO LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 UPHENO LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 OCVDAE LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 NIFSTD LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 KTAO LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 LEPAO LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 COLAO LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 GENEPIO LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 MAXO LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 CCF LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 ENVO LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 FNS-H LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 AISM LOOM
http://purl.obolibrary.org/obo/UBERON_0001555 NMDCO LOOM