Uber Anatomy Ontology

Last uploaded: March 22, 2024
Preferred Name

chordate pharynx

Synonyms

pharynx

Definitions

Consider generalizing to deuterostome pharynx A portion of the respiratory and digestive tracts; its distal limit is the superior part of the esophagus and it connects the nasal and oral cavities with the esophagus and larynx; it contains the valleculae and the pyriform recesses; its upper limits are the nasal cavity and cranial base.[FEED].

ID

http://purl.obolibrary.org/obo/UBERON_0001042

comment

Consider generalizing to deuterostome pharynx

axiom_lost_from_external_ontology

relationship type change: part_of_proxy respiratory system (AAO:0000541) CHANGED TO: part_of respiratory system (UBERON:0001004)[AAO]

relationship type change: part_of_proxy respiratory system (AAO:0000541) CHANGED TO: develops_from respiratory system (UBERON:0001004)[AAO]

database_cross_reference

NCIT:C12425

EHDAA2:0001458

galen:Pharynx

UMLS:C0031354

MESH:D010614

BTO:0001049

XAO:0003227

ZFA:0000056

TAO:0000056

CALOHA:TS-0785

AAO:0000967

SCTID:181211006

EFO:0000836

VHOG:0000462

Wikipedia:Pharynx

EMAPA:16706

EHDAA:2947

EV:0100065

FMA:46688

GAID:155

MA:0000432

definition

A portion of the respiratory and digestive tracts; its distal limit is the superior part of the esophagus and it connects the nasal and oral cavities with the esophagus and larynx; it contains the valleculae and the pyriform recesses; its upper limits are the nasal cavity and cranial base.[FEED].

develops_from

http://purl.obolibrary.org/obo/UBERON_0009145

external_definition

Anatomical cavity bounded by the derivatives of the branchial arches.[AAO]

Swollen region of the anterior foregut, posterior to the mouth and anterior to the liver; its walls form the jaws and gills[ZFA:0000056, ZFIN:ZDB-PUB-961014-576].

Swollen region of the anterior foregut, posterior to the mouth and anterior to the liver; its walls form the jaws and gills. Kimmel et al, 1995.[TAO]

The portion of the alimentary canal between the mouth and the oesophagus. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]

A funnel-shaped fibromuscular tube that conducts food to the ESOPHAGUS, and air to the LARYNYX and LUNGS. It is located posterior to the NASAL CAVITY; ORAL CAVITY; and LARYNX, and extends from the SKULL BASE to the inferior border of the CRICOID CARTILAGE anteriorly and to the inferior border of the C6 vertebra posteriorly. It is divided into the NASOPHARYNX; OROPHARYNX; and HYPOPHARYNX (laryngopharynx)[MESH:A03.867].

external_ontology_notes

MA/FMA pharynx not part of digestive/alimentary system, we are consistent with this scheme

has_broad_synonym

pharynx

has_obo_namespace

uberon

homology_notes

(...) the earliest vertebrates possessed unjointed internal and external branchial arches, and musculature encircling the pharynx.[well established][VHOG]

id

UBERON:0001042

in_subset

http://purl.obolibrary.org/obo/uberon/core#efo_slim

http://purl.obolibrary.org/obo/uberon/core#vertebrate_core

http://purl.obolibrary.org/obo/uberon/core#pheno_slim

http://purl.obolibrary.org/obo/uberon/core#uberon_slim

label

chordate pharynx

notation

UBERON:0001042

only in taxon

http://purl.obolibrary.org/obo/NCBITaxon_7711

part_of

http://purl.obolibrary.org/obo/UBERON_0001004

prefLabel

chordate pharynx

treeView

http://purl.obolibrary.org/obo/UBERON_0009145

http://purl.obolibrary.org/obo/UBERON_0001004

subClassOf

http://purl.obolibrary.org/obo/UBERON_0006562

Delete Subject Author Type Created
No notes to display
Create mapping

Delete Mapping To Ontology Source
http://purl.obolibrary.org/obo/UBERON_0001042 GO-PLUS SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001042 EFO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001042 PATO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001042 OBA SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001042 XPO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001042 CL SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001042 MONDO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001042 NPOKB SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001042 OAE SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001042 RBO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001042 CLO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001042 OHPI SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001042 FOVT SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001042 PCL SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001042 NIFDYS SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001042 NBO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001042 HHEAR SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001042 ODAE SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001042 UPHENO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001042 OCVDAE SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001042 NIFSTD SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001042 KTAO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001042 GENEPIO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001042 MAXO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001042 FNS-H SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001042 AISM SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001042 NMDCO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0001042 GO-PLUS LOOM
http://purl.obolibrary.org/obo/UBERON_0001042 EFO LOOM
http://purl.obolibrary.org/obo/UBERON_0001042 PATO LOOM
http://purl.obolibrary.org/obo/UBERON_0001042 OBA LOOM
http://purl.obolibrary.org/obo/UBERON_0001042 XPO LOOM
http://purl.obolibrary.org/obo/UBERON_0001042 NPOKB LOOM
http://purl.obolibrary.org/obo/UBERON_0001042 OAE LOOM
http://purl.obolibrary.org/obo/UBERON_0001042 RBO LOOM
http://purl.obolibrary.org/obo/UBERON_0001042 CLO LOOM
http://purl.obolibrary.org/obo/UBERON_0001042 OHPI LOOM
http://purl.obolibrary.org/obo/UBERON_0001042 FOVT LOOM
http://purl.obolibrary.org/obo/UBERON_0001042 PCL LOOM
http://purl.obolibrary.org/obo/UBERON_0001042 NIFDYS LOOM
http://purl.obolibrary.org/obo/UBERON_0001042 NBO LOOM
http://purl.obolibrary.org/obo/UBERON_0001042 HHEAR LOOM
http://purl.obolibrary.org/obo/UBERON_0001042 ODAE LOOM
http://purl.obolibrary.org/obo/UBERON_0001042 UPHENO LOOM
http://purl.obolibrary.org/obo/UBERON_0001042 OCVDAE LOOM
http://purl.obolibrary.org/obo/UBERON_0001042 NIFSTD LOOM
http://purl.obolibrary.org/obo/UBERON_0001042 KTAO LOOM
http://purl.obolibrary.org/obo/UBERON_0001042 GENEPIO LOOM
http://purl.obolibrary.org/obo/UBERON_0001042 MAXO LOOM
http://purl.obolibrary.org/obo/UBERON_0001042 FNS-H LOOM
http://purl.obolibrary.org/obo/UBERON_0001042 AISM LOOM
http://purl.obolibrary.org/obo/UBERON_0001042 NMDCO LOOM
http://purl.obolibrary.org/obo/UBERON_0001042 CL LOOM