PMO Precision Medicine Ontology

Last uploaded: December 16, 2020
Preferred Name

Chromatin
Synonyms
Definitions

"The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome." [GOC:elh, PMID:20404130]

ID

http://www.phoc.org.cn/pmo/class/PMO_00054502

Database_Cross_Reference

GO:0000785

Definition

"The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome." [GOC:elh, PMID:20404130]

Gene Annotation

FAM111A(UniProtKB:Q96PZ2)

MAEL(UniProtKB:Q96JY0)

IST1(UniProtKB:P53990)

MYCN(UniProtKB:P04198)

LOXL2(UniProtKB:Q9Y4K0)

ARRB1(UniProtKB:P49407)

HR(UniProtKB:O43593)

PLK2(UniProtKB:Q9NYY3)

SIN3B(UniProtKB:O75182)

KIF22(UniProtKB:Q14807)

PCNA(UniProtKB:P12004)

HTRA2(UniProtKB:O43464)

NIPBL(UniProtKB:Q6KC79)

L3MBTL1(UniProtKB:Q9Y468)

PARK7(UniProtKB:Q99497)

EIF3E(UniProtKB:P60228)

PDS5A(UniProtKB:Q29RF7)

CAPN2(UniProtKB:P17655)

NSD1(UniProtKB:Q96L73)

STAG3L2(UniProtKB:P0CL84)

RBL1(UniProtKB:P28749)

MED1(UniProtKB:Q15648)

CSNK2B(UniProtKB:P67870)

LEMD2(UniProtKB:Q8NC56)

SUV39H2(UniProtKB:Q9H5I1)

RBL2(UniProtKB:Q08999)

CBX1(UniProtKB:P83916)

TP73(UniProtKB:O15350)

JUNB(UniProtKB:P17275)

OIP5(UniProtKB:O43482)

TOX4(UniProtKB:O94842)

RB1(UniProtKB:P06400)

KDM3B(UniProtKB:Q7LBC6)

MTBP(UniProtKB:Q96DY7)

HIC1(UniProtKB:Q14526)

HMGN2(UniProtKB:P05204)

MCM2(UniProtKB:P49736)

RCC1(UniProtKB:P18754)

HMGN4(UniProtKB:O00479)

AHCTF1(UniProtKB:Q8WYP5)

ANKRD17(UniProtKB:O75179)

MAU2(UniProtKB:Q9Y6X3)

PARPBP(UniProtKB:Q9NWS1)

KMT2E(UniProtKB:Q8IZD2)

SMC3(UniProtKB:Q9UQE7)

JMJD1C(UniProtKB:Q15652)

HMGN3(UniProtKB:Q15651)

MEN1(UniProtKB:O00255)

STAG3L3(UniProtKB:P0CL85)

ESCO1(UniProtKB:Q5FWF5)

NFE2L2(UniProtKB:Q16236)

DSCC1(UniProtKB:Q9BVC3)

CHMP7(UniProtKB:Q8WUX9)

CREB3L2(UniProtKB:Q70SY1)

HLCS(UniProtKB:P50747)

STAG1(UniProtKB:Q8WVM7)

POU1F1(UniProtKB:P28069)

NSD2(UniProtKB:O96028)

STAG3L1(UniProtKB:P0CL83)

JUND(UniProtKB:P17535)

CHEK1(UniProtKB:O14757)

TRIM28(UniProtKB:Q13263)

HMGN1(UniProtKB:P05114)

PPP1R10(UniProtKB:Q96QC0)

COPS5(UniProtKB:Q92905)

RPA2(UniProtKB:P15927)

CENPF(UniProtKB:P49454)

MECP2(UniProtKB:P51608)

NUCKS1(UniProtKB:Q9H1E3)

UXT(UniProtKB:Q9UBK9)

KDM3A(UniProtKB:Q9Y4C1)

MIS18A(UniProtKB:Q9NYP9)

NSD3(UniProtKB:Q9BZ95)

FBH1(UniProtKB:Q8NFZ0)

FANK1(UniProtKB:Q8TC84)

CHMP2A(UniProtKB:O43633)

MAF(UniProtKB:O75444)

ESCO2(UniProtKB:Q56NI9)

UBE2B(UniProtKB:P63146)

RAD51(UniProtKB:Q06609)

MCM7(UniProtKB:P33993)

CCND2(UniProtKB:P30279)

PINK1(UniProtKB:Q9BXM7)

PLK1(UniProtKB:P53350)

UBE2A(UniProtKB:P49459)

SLF2(UniProtKB:Q8IX21)

APTX(UniProtKB:Q7Z2E3)

WDR82(UniProtKB:Q6UXN9)

CBX3(UniProtKB:Q13185)

MAGED1(UniProtKB:Q9Y5V3)

SIN3A(UniProtKB:Q96ST3)

POLA1(UniProtKB:P09884)

RAN(UniProtKB:P62826)

STAG3L4(UniProtKB:Q8TBR4)

PDS5B(UniProtKB:Q9NTI5)

STAG2(UniProtKB:Q8N3U4)

HDAC1(UniProtKB:Q13547)

RAD21(UniProtKB:O60216)

TMPO(UniProtKB:P42166)

AKAP8L(UniProtKB:Q9ULX6)

CSNK2A2(UniProtKB:P19784)

SDR16C5(UniProtKB:Q8N3Y7)

SOX10(UniProtKB:P56693)

SMCR8(UniProtKB:Q8TEV9)

NEDD4(UniProtKB:P46934)

CDK4(UniProtKB:P11802)

HMGN5(UniProtKB:P82970)

UBR2(UniProtKB:Q8IWV8)

UPF1(UniProtKB:Q92900)

WAPL(UniProtKB:Q7Z5K2)

MBD4(UniProtKB:O95243)

SFPQ(UniProtKB:P23246)

STAG3(UniProtKB:Q9UJ98)

label

Chromatin

MCID

MC04788987

PMOID

PMO:00054502

prefixIRI

pmo:PMO_00054502

prefLabel

Chromatin

Synonym

"chromosome scaffold" RELATED []

Tree Number

T10.3.14.13.10.2

T10.3.7.100.34.10.2

subClassOf

http://www.phoc.org.cn/pmo/class/PMO_00054501

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Mapping To Ontology Source
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C13201 HRAVS LOOM
http://purl.obolibrary.org/obo/GO_0000785 FYPO LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C13201 HRAVS LOOM
http://purl.obolibrary.org/obo/GO_0000785 CL LOOM
http://purl.obolibrary.org/obo/GO_0000785 UBERON LOOM
http://purl.obolibrary.org/obo/GO_0000785 OBA LOOM
http://purl.obolibrary.org/obo/GO_0000785 NIGO LOOM
http://purl.obolibrary.org/obo/GO_0000785 GO-EXT LOOM
http://purl.obolibrary.org/obo/GO_0000785 PDRO LOOM
http://purl.obolibrary.org/obo/GO_0000785 CLO LOOM
http://purl.obolibrary.org/obo/GO_0000785 OBI LOOM
http://purl.obolibrary.org/obo/GO_0000785 GCBO LOOM
http://purl.obolibrary.org/obo/GO_0000785 FOVT LOOM
http://purl.obolibrary.org/obo/GO_0000785 HOIP LOOM
http://purl.obolibrary.org/obo/GO_0000785 CCO LOOM
http://purl.obolibrary.org/obo/GO_0000785 REXO LOOM
http://purl.obolibrary.org/obo/GO_0000785 ONE LOOM
http://purl.obolibrary.org/obo/GO_0000785 RBO LOOM
http://purl.obolibrary.org/obo/GO_0000785 OBI_BCGO LOOM
http://purl.obolibrary.org/obo/GO_0000785 GEXO LOOM
http://purl.obolibrary.org/obo/GO_0000785 XPO LOOM
http://purl.obolibrary.org/obo/GO_0000785 PHAGE LOOM
http://purl.obolibrary.org/obo/GO_0000785 PCL LOOM
http://purl.obolibrary.org/obo/GO_0000785 PATO LOOM
http://purl.obolibrary.org/obo/GO_0000785 NIFDYS LOOM
http://purl.obolibrary.org/obo/GO_0000785 GO-PLUS LOOM
http://purl.obolibrary.org/obo/GO_0000785 BERO LOOM
http://purl.obolibrary.org/obo/GO_0000785 HHEAR LOOM
http://purl.obolibrary.org/obo/GO_0000785 CHRO LOOM
http://purl.obolibrary.org/obo/GO_0000785 UPHENO LOOM
http://purl.obolibrary.org/obo/GO_0000785 NIFSTD LOOM
http://purl.obolibrary.org/obo/GO_0000785 ECAO LOOM
http://purl.obolibrary.org/obo/GO_0000785 KTAO LOOM
http://purl.obolibrary.org/obo/GO_0000785 REGN_GO LOOM
http://purl.obolibrary.org/obo/GO_0000785 RETO LOOM
http://purl.obolibrary.org/obo/GO_0000785 MAXO LOOM
http://purl.obolibrary.org/obo/GO_0000785 GO LOOM
http://purl.obolibrary.org/obo/GO_0000785 ZP LOOM
http://purl.obolibrary.org/obo/GO_0000785 AISM LOOM
http://purl.obolibrary.org/obo/GO_0000785 NMDCO LOOM
http://purl.org/sig/ont/fma/fma67526 FMA LOOM
http://purl.obolibrary.org/obo/OMIT_0004163 OMIT LOOM
http://purl.obolibrary.org/obo/MESH_D002843 BERO LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#G05.360.160.180 RH-MESH LOOM
http://uri.neuinfo.org/nif/nifstd/sao1615953555 NIFSTD LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#A11.284.430.106.279.345.190.160.180 RH-MESH LOOM
http://purl.obolibrary.org/obo/HINO_0017518 HINO LOOM
http://purl.bioontology.org/ontology/MESH/D002843 MESH LOOM
http://www.bootstrep.eu/ontology/GRO#Chromatin GRO LOOM
http://id.nlm.nih.gov/mesh/D002843 MDM LOOM
http://purl.obolibrary.org/obo/SPD_0000793 SPD LOOM
http://purl.obolibrary.org/obo/NCIT_C13201 BERO LOOM
http://localhost/plosthes.2017-1#1702 PLOSTHES LOOM
http://purl.org/obo/owl/GO#GO_0000785 BIOMODELS LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D12.776.664.224 RH-MESH LOOM
https://pat.nichd.nih.gov/patepigeneticentity/P00000139 EPIE LOOM
http://purl.obolibrary.org/obo/HINO_0004059 HINO LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0008546 OCHV LOOM
http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Subcellular.owl#sao1615953555 NIFSUBCELL LOOM
http://purl.obolibrary.org/obo/CLAO_0001193 CLAO LOOM
http://purl.jp/bio/4/id/200906042682530961 IOBC LOOM
http://purl.org/obo/owlapi/fma#FMA_67526 BIOMODELS LOOM
http://purl.obolibrary.org/obo/PLANA_0000534 PLANA LOOM
http://purl.obolibrary.org/obo/PLANA_0000534 PLANP LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D002843 RH-MESH LOOM
http://ccdb.ucsd.edu/SAO/1.2#sao1615953555 SAO LOOM
http://purl.bioontology.org/ontology/LNC/LP30645-3 LOINC LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C13201 NCIT LOOM
http://purl.bioontology.org/ontology/CSP/1255-9141 CRISP LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#2926 OCHV LOOM
http://www.cea.fr/ontotoxnuc#Chromatine ONTOTOXNUC LOOM
http://purl.bioontology.org/ontology/SNOMEDCT/60085001 SNOMEDCT LOOM