The Prescription of Drugs Ontology

Last uploaded: September 4, 2020
Preferred Name

cell culture
Synonyms
Definitions

A material entity comprised of cultured cells and the media in which they are being propagated or stored. a cell culture is a material entity consisting of a population of cells that is maintained in vitro A processed material comprised of a collection of cultured cells that has been continuously maintained together in culture and shares a common propagation history. A cell culture includes the cells in culture, as well as the media and all additives in which the cells are being grown or in which they are stored. The extent of a 'cultured cell population' is restricted only in that all cell members must share a propagation history (ie be derived through a common lineage of passages from an initial culture). In being defined in this way, this class can be used to refer to the populations that researchers actually use in the practice of science - ie are the inputs to culturing, experimentation, and sharing. The cells in such populations will be a relatively uniform population as they have experienced similar selective pressures due to their continuous co-propagation. And this population will also have a single passage number, again owing to their common passaging history. Cultured cell populations represent only a collection of cells (ie do not include media, culture dishes, etc), and include populations of cultured unicellular organisms or cultured multicellular organism cells. They can exist under active culture, stored in a quiescent state for future use, or applied experimentally.

ID

http://purl.obolibrary.org/obo/OBI_0001876

comment

A cell culture includes the cells in culture, as well as the media and all additives in which the cells are being grown or in which they are stored.

The extent of a 'cultured cell population' is restricted only in that all cell members must share a propagation history (ie be derived through a common lineage of passages from an initial culture). In being defined in this way, this class can be used to refer to the populations that researchers actually use in the practice of science - ie are the inputs to culturing, experimentation, and sharing. The cells in such populations will be a relatively uniform population as they have experienced similar selective pressures due to their continuous co-propagation. And this population will also have a single passage number, again owing to their common passaging history. Cultured cell populations represent only a collection of cells (ie do not include media, culture dishes, etc), and include populations of cultured unicellular organisms or cultured multicellular organism cells. They can exist under active culture, stored in a quiescent state for future use, or applied experimentally.

alternative term

cell culture sample

definition source

OBI-CLO Alignment Working Group (Spring 2013)

GROUP: OBI Biomaterial Branch

PERSON:Matthew Brush

editor note

2013-6-5 MHB: This OBI class was formerly called 'cell culture', but label changed and definition updated following CLO alignment efforts in spring 2013, during which the intent of this class was clarified to refer to portions of a culture or line rather than a complete cell culture or line.

editor preferred term

cell culture

cell culture

cultured cell population

example of usage

A cultured cell population applied in an experiment: "293 cells expressing TrkA were serum-starved for 18 hours and then neurotrophins were added for 10 min before cell harvest." (Lee, Ramee, et al. "Regulation of cell survival by secreted proneurotrophins." Science 294.5548 (2001): 1945-1948). A cultured cell population maintained in vitro: "Rat cortical neurons from 15 day embryos are grown in dissociated cell culture and maintained in vitro for 8–12 weeks" (Dichter, Marc A. "Rat cortical neurons in cell culture: culture methods, cell morphology, electrophysiology, and synapse formation." Brain Research 149.2 (1978): 279-293).

Jurkat cell line in RPMI w/ 10% FCS. PBMCs were purified from blood sample and put into tissue culture media. Purification of recombinant human growth hormone from CHO cell culture supernatant by Gradiflow preparative electrophoresis technology. Protein Expr Purif. 2003 Nov;32(1):126-34. PMID: 14680949

has curation status

http://purl.obolibrary.org/obo/IAO_0000122

http://purl.obolibrary.org/obo/IAO_0000120

has part

http://purl.obolibrary.org/obo/CL_0000010

imported from

http://purl.obolibrary.org/obo/obi.owl

label

cell culture

cell culture

cultured cell population

overlaps

http://purl.obolibrary.org/obo/CL_0000010

prefixIRI

OBI:0001876

prefLabel

cell culture

term editor

PERSON: Bjoern Peters

PERSON:Matthew Brush

textual definition

A material entity comprised of cultured cells and the media in which they are being propagated or stored.

a cell culture is a material entity consisting of a population of cells that is maintained in vitro

A processed material comprised of a collection of cultured cells that has been continuously maintained together in culture and shares a common propagation history.

disjointWith

http://purl.obolibrary.org/obo/OBI_0100067

http://purl.obolibrary.org/obo/OBI_0100016

http://purl.obolibrary.org/obo/OBI_0100017

subClassOf

http://purl.obolibrary.org/obo/OBI_0000047

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Delete Mapping To Ontology Source
http://purl.obolibrary.org/obo/OBI_0001876 EUPATH SAME_URI
http://purl.obolibrary.org/obo/OBI_0001876 OBI SAME_URI
http://purl.obolibrary.org/obo/OBI_0001876 HOIP SAME_URI
http://purl.obolibrary.org/obo/OBI_0001876 ONE SAME_URI
http://purl.obolibrary.org/obo/OBI_0001876 EGO SAME_URI
http://purl.obolibrary.org/obo/OBI_0001876 BERO SAME_URI
http://purl.obolibrary.org/obo/OBI_0001876 OBI_IEE SAME_URI
http://purl.jp/bio/11/meo/MEO_0002250 MEO LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#2582 OCHV LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C16396 NCIT LOOM
http://scai.fraunhofer.de/CSEO#CSEO_00001062 CSEO LOOM
http://purl.obolibrary.org/obo/OBI_0100060 FLU LOOM
http://purl.obolibrary.org/obo/BTO_0000214 EFO LOOM
http://purl.obolibrary.org/obo/BTO_0000214 FYPO LOOM
http://purl.obolibrary.org/obo/BTO_0000214 BTO LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0007585 OCHV LOOM
http://purl.obolibrary.org/obo/OBI_0001876 EUPATH LOOM
http://purl.obolibrary.org/obo/OBI_0001876 OBI LOOM
http://purl.obolibrary.org/obo/OBI_0001876 HOIP LOOM
http://purl.obolibrary.org/obo/OBI_0001876 ONE LOOM
http://purl.obolibrary.org/obo/OBI_0001876 EGO LOOM
http://purl.obolibrary.org/obo/OBI_0001876 BERO LOOM
http://purl.obolibrary.org/obo/OBI_0001876 OBI_IEE LOOM
http://www.case.edu/EpilepsyOntology.owl#CellCulture EPSO LOOM
http://purl.obolibrary.org/obo/ENVO_02000008 ENM LOOM
http://purl.obolibrary.org/obo/ENVO_02000008 ENVO LOOM
http://purl.obolibrary.org/obo/ENVO_02000008 BERO LOOM
http://purl.obolibrary.org/obo/ENVO_02000008 FNS-H LOOM
http://purl.obolibrary.org/obo/ENVO_02000008 NMDCO LOOM
http://purl.jp/bio/4/id/200906018243511537 IOBC LOOM
https://pat.nichd.nih.gov/patinvestigativetechniques/IT.04.04 PATIT LOOM