Biological Pathway Taxonomy

Last uploaded: March 30, 2022
Preferred Name

Ichthyosis Vulgaris
Synonyms

PathwayType: signaling

PMID: 23301728

Organ: skin

NodeType: Pathway

PMID: 26945532

Pathway_Author: V. Sobolev ORCID:0000-0003-4779-156X

Link: https://mammal-profservices.pathwaystudio.com/app/sd?urn=urn:agi-pathway:uuid-fa25ee7c-2edd-474f-bcd8-dce84a2818b2

Description: Ichthyosis vulgaris is the most common ichthyosis, with an incidence of 1:250 to 1:1000. Pathway is built manually using published studies.

Organ_System: integumentary system

PMID: 26844893

Notes: Headnote: Ichthyosis is a family of genetic disorders with dry, scaly and thickened skin. Ichthyosis vulgaris (IV) is the most common form of ichthyosis, with an incidence of 1:250 to 1:1000. IV is the mildest form of hereditary non-syndromic ichthyosis, characterized by xerosis, scaling, pruritus and eczema, and is strongly associated with atopic manifestations. IV is considered a single gene disease caused by mutations in the gene encoding profillagrin, which is the precursor for fillagrin (FLG). Signaling description: Profilaggrin is cleaved by several enzymes and converted into functional filaggrin monomer. The profilaggrin linker domain is cleaved by KLK5. Kallikrein-related peptidase 5(KLK5) is a major serine protease found in the skin, secreted from lamellar granules following its expression in the stratum granulosum and activated in the extracellular space of the stratum corneum. Filaggrin monomers, the product of biochemical processing, bind to keratin 1 or keratin 10 and bundle keratin intermediate filaments in the lower stratum corneum. Filaggrin monomers then undergo citrullination mediated by peptidyl arginine deiminase 1 (PADI1) and PADI3. Deiminated filaggrin monomers are cleaved by calpain 1 and caspase-14, yielding free amino acids following degradation by bleomycin hydrolase in the upper stratum corneum. Free aminoacids serve as natural moisturizing factors in human skin. Overall, a significant role of FLG mutations in the pathogenesis of ichthyosis vulgaris has been proven. Outcome effects: Filaggrin is a key protein that facilitates terminal differentiation of the epidermis and the formation of the protective skin barrier. In the outer granular layer of the epidermis, filaggrin is associated with keratin intermediate filaments and it aids their packing into bundles. In terminal differentiation, filaggrin is cross-linked to the cornified cell envelope, which constitutes an insoluble barrier in the stratum corneum to protect the organism against environmental agents and to prevent epidermal water loss. Animal data: Role of Kallikrein-related peptidase 5(KLK5) as the major serine protease found in the skin for profilaggrin was revealed from animal model experiments. Highlighted proteins: Lipids, amino acids and H2O are highlighted in blue in order to illustrate the disruption of protective skin barrier which causes epidermal water loss in the stratum corneum. Mutated proteins: FLG mutated in IV is shown in white-out style.

PMID: 23870202

CellType: keratinocyte

Source: Diseases

ID

urn:agi-pathway:uuid-fa25ee7c-2edd-474f-bcd8-dce84a2818b2

database_cross_reference

PS:PathwayType

PS:Description

PS:Pathway_Author

PS:Link

PS:CellType

PS:Organ_System

PS:PMID

PS:NodeType

PS:Notes

PS:Organ

PS:Source

has_exact_synonym

PathwayType: signaling

PMID: 23301728

Organ: skin

NodeType: Pathway

PMID: 26945532

Pathway_Author: V. Sobolev ORCID:0000-0003-4779-156X

Link: https://mammal-profservices.pathwaystudio.com/app/sd?urn=urn:agi-pathway:uuid-fa25ee7c-2edd-474f-bcd8-dce84a2818b2

Description: Ichthyosis vulgaris is the most common ichthyosis, with an incidence of 1:250 to 1:1000. Pathway is built manually using published studies.

Organ_System: integumentary system

PMID: 26844893

Notes: Headnote: Ichthyosis is a family of genetic disorders with dry, scaly and thickened skin. Ichthyosis vulgaris (IV) is the most common form of ichthyosis, with an incidence of 1:250 to 1:1000. IV is the mildest form of hereditary non-syndromic ichthyosis, characterized by xerosis, scaling, pruritus and eczema, and is strongly associated with atopic manifestations. IV is considered a single gene disease caused by mutations in the gene encoding profillagrin, which is the precursor for fillagrin (FLG). Signaling description: Profilaggrin is cleaved by several enzymes and converted into functional filaggrin monomer. The profilaggrin linker domain is cleaved by KLK5. Kallikrein-related peptidase 5(KLK5) is a major serine protease found in the skin, secreted from lamellar granules following its expression in the stratum granulosum and activated in the extracellular space of the stratum corneum. Filaggrin monomers, the product of biochemical processing, bind to keratin 1 or keratin 10 and bundle keratin intermediate filaments in the lower stratum corneum. Filaggrin monomers then undergo citrullination mediated by peptidyl arginine deiminase 1 (PADI1) and PADI3. Deiminated filaggrin monomers are cleaved by calpain 1 and caspase-14, yielding free amino acids following degradation by bleomycin hydrolase in the upper stratum corneum. Free aminoacids serve as natural moisturizing factors in human skin. Overall, a significant role of FLG mutations in the pathogenesis of ichthyosis vulgaris has been proven. Outcome effects: Filaggrin is a key protein that facilitates terminal differentiation of the epidermis and the formation of the protective skin barrier. In the outer granular layer of the epidermis, filaggrin is associated with keratin intermediate filaments and it aids their packing into bundles. In terminal differentiation, filaggrin is cross-linked to the cornified cell envelope, which constitutes an insoluble barrier in the stratum corneum to protect the organism against environmental agents and to prevent epidermal water loss. Animal data: Role of Kallikrein-related peptidase 5(KLK5) as the major serine protease found in the skin for profilaggrin was revealed from animal model experiments. Highlighted proteins: Lipids, amino acids and H2O are highlighted in blue in order to illustrate the disruption of protective skin barrier which causes epidermal water loss in the stratum corneum. Mutated proteins: FLG mutated in IV is shown in white-out style.

PMID: 23870202

CellType: keratinocyte

Source: Diseases

id

urn:agi-pathway:uuid-fa25ee7c-2edd-474f-bcd8-dce84a2818b2

label

Ichthyosis Vulgaris

notation

uuid-fa25ee7c-2edd-474f-bcd8-dce84a2818b2

prefLabel

Ichthyosis Vulgaris

treeView

urn:agi-folder:ichthyosis

urn:agi-folder:integumentary_system

urn:agi-folder:i

subClassOf

urn:agi-folder:ichthyosis

urn:agi-folder:integumentary_system

urn:agi-folder:i

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