Biological Pathway Taxonomy

Last uploaded: March 30, 2022
Preferred Name

Alkalosis
Synonyms

PathwayType: signaling

PMID: 26597304

Description: Nephrolithiasis is a process of forming stones in kidneys. Pathway is built manually using published studies.

CellType: epithelial cell

Link: https://mammal-profservices.pathwaystudio.com/app/sd?urn=urn:agi-pathway:uuid-be8699ab-1494-4e29-9d48-ae01bdc8b3d5

Tissue: epithelium

Notes: Nephrolithiasis is a process of forming stones in kidneys. Acid-base homeostasis is critical for normal kidney physiology. Alkaline urine reduces solubility of calcium and phosphate products and promotes formation of kidney stones.

NodeType: Pathway

Organ_System: urinary tract

Pathway_Author: M. Zharkova  ORCID:0000-0001-8706-9411

PMID: 21170875

Organ: kidney

Source: Diseases

ID

urn:agi-pathway:uuid-be8699ab-1494-4e29-9d48-ae01bdc8b3d5

database_cross_reference

PS:PathwayType

PS:Description

PS:Tissue

PS:Pathway_Author

PS:Link

PS:CellType

PS:Organ_System

PS:PMID

PS:NodeType

PS:Notes

PS:Organ

PS:Source

has_exact_synonym

PathwayType: signaling

PMID: 26597304

Description: Nephrolithiasis is a process of forming stones in kidneys. Pathway is built manually using published studies.

CellType: epithelial cell

Link: https://mammal-profservices.pathwaystudio.com/app/sd?urn=urn:agi-pathway:uuid-be8699ab-1494-4e29-9d48-ae01bdc8b3d5

Tissue: epithelium

Notes: Nephrolithiasis is a process of forming stones in kidneys. Acid-base homeostasis is critical for normal kidney physiology. Alkaline urine reduces solubility of calcium and phosphate products and promotes formation of kidney stones.

NodeType: Pathway

Organ_System: urinary tract

Pathway_Author: M. Zharkova  ORCID:0000-0001-8706-9411

PMID: 21170875

Organ: kidney

Source: Diseases

id

urn:agi-pathway:uuid-be8699ab-1494-4e29-9d48-ae01bdc8b3d5

label

Alkalosis

notation

uuid-be8699ab-1494-4e29-9d48-ae01bdc8b3d5

prefLabel

Alkalosis

treeView

urn:agi-folder:a

urn:agi-folder:urinary_tract

urn:agi-folder:urolithiasis

urn:agi-folder:epithelium

subClassOf

urn:agi-folder:a

urn:agi-folder:urinary_tract

urn:agi-folder:urolithiasis

urn:agi-folder:epithelium

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Delete Mapping To Ontology Source
http://purl.bioontology.org/ontology/SNOMEDCT/21420006 SNOMEDCT LOOM
http://www.semanticweb.org/ontologies/2012/11/abnormalities.owl#phenodb:2368 IFAR LOOM
http://www.mskcc.org/ontologies/2013/03/sae.owl#Alkalosis SSE LOOM
http://purl.bioontology.org/ontology/ICD10CM/E87.3 ICD10CM LOOM
http://id.nlm.nih.gov/mesh/D000471 MDM LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D000471 RH-MESH LOOM
http://purl.bioontology.org/ontology/CST/ALKALOSIS COSTART LOOM
rgo:10880 GAMUTS LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Alkalosis CSEO LOOM
http://purl.bioontology.org/ontology/ICD10/E87.3 ICD10 LOOM
http://purl.bioontology.org/ontology/MESH/D000471 MESH LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0002063 OCHV LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#900 OCHV LOOM
http://purl.bioontology.org/ontology/WHO/0365 WHO-ART LOOM
http://purl.bioontology.org/ontology/RCD/C363. RCD LOOM
http://purl.bioontology.org/ontology/MEDDRA/10001680 MEDDRA LOOM
http://purl.bioontology.org/ontology/OMIM/MTHU054076 OMIM LOOM
http://purl.obolibrary.org/obo/MP_0003028 MP LOOM
http://purl.obolibrary.org/obo/MP_0003028 MP LOOM
http://purl.obolibrary.org/obo/MP_0003028 UPHENO LOOM
http://purl.obolibrary.org/obo/MP_0003028 CHIRO LOOM
http://purl.obolibrary.org/obo/HP_0001948 CCONT LOOM
http://purl.obolibrary.org/obo/HP_0001948 EFO LOOM
http://purl.obolibrary.org/obo/HP_0001948 EFO LOOM
http://purl.obolibrary.org/obo/HP_0001948 HP LOOM
http://purl.obolibrary.org/obo/HP_0001948 UPHENO LOOM
http://purl.obolibrary.org/obo/NCIT_C37909 BERO LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C37909 NCIT LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#C18.452.076.354 RH-MESH LOOM
http://purl.bioontology.org/ontology/ICD9CM/276.3 ICD9CM LOOM
http://purl.bioontology.org/ontology/CST/METALKALOSIS COSTART LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/ctcae5.owl#C143270 CTCAE LOOM
http://www.co-ode.org/ontologies/galen#Alkalosis GALEN LOOM
http://purl.jp/bio/4/id/200906030797936726 IOBC LOOM
http://purl.obolibrary.org/obo/CCTO_000782 CCTOO LOOM
http://purl.obolibrary.org/obo/OMIT_0001892 OMIT LOOM
http://purl.bioontology.org/ontology/RCTV2/C363.00 RCTV2 LOOM
http://purl.bioontology.org/ontology/CSP/0465-1418 CRISP LOOM
http://www.phoc.org.cn/pmo/class/PMO_00085270 PMAPP-PMO LOOM