Biological Pathway Taxonomy

Last uploaded: March 30, 2022
Preferred Name

Ependymoma

Synonyms

Organ_System: nervous system

PathwayType: signaling

PMID: 19531565

CellType: cancer cell

Description: Ependymomas are glial tumors that arise from ependymal cells within the central nervous system. Pathway is built manually using published studies.

Organ: brain

CellType: glial precursor cell

Tissue: nerve tissue

NodeType: Pathway

PMID: 18676356

Pathway_Author: S. Sozin www.researchgate.net/profile/Sergey-Sozin

Link: https://mammal-profservices.pathwaystudio.com/app/sd?urn=urn:agi-pathway:uuid-2def2d33-a7db-44b3-a7ef-6b2964943656

Notes: Headnote: Ependymomas are glial tumors that arise from ependymal cells within the central nervous system. Signaling description: Notch, Sonic hedgehog homolog (SHH), ERBB/EPHB, IGF1R, and TP53 signaling pathways are implicated in the pathogenesis of ependymomas. Highlighted proteins: Proteins with increased expression or activity are highlighted in red, and proteins with decreased expression or activity are highlighted in blue.

Source: Diseases

ID

urn:agi-pathway:uuid-2def2d33-a7db-44b3-a7ef-6b2964943656

database_cross_reference

PS:PathwayType

PS:Description

PS:Tissue

PS:Pathway_Author

PS:Link

PS:CellType

PS:Organ_System

PS:PMID

PS:NodeType

PS:Notes

PS:Organ

PS:Source

has_exact_synonym

Organ_System: nervous system

PathwayType: signaling

PMID: 19531565

CellType: cancer cell

Description: Ependymomas are glial tumors that arise from ependymal cells within the central nervous system. Pathway is built manually using published studies.

Organ: brain

CellType: glial precursor cell

Tissue: nerve tissue

NodeType: Pathway

PMID: 18676356

Pathway_Author: S. Sozin www.researchgate.net/profile/Sergey-Sozin

Link: https://mammal-profservices.pathwaystudio.com/app/sd?urn=urn:agi-pathway:uuid-2def2d33-a7db-44b3-a7ef-6b2964943656

Notes: Headnote: Ependymomas are glial tumors that arise from ependymal cells within the central nervous system. Signaling description: Notch, Sonic hedgehog homolog (SHH), ERBB/EPHB, IGF1R, and TP53 signaling pathways are implicated in the pathogenesis of ependymomas. Highlighted proteins: Proteins with increased expression or activity are highlighted in red, and proteins with decreased expression or activity are highlighted in blue.

Source: Diseases

id

urn:agi-pathway:uuid-2def2d33-a7db-44b3-a7ef-6b2964943656

label

Ependymoma

notation

uuid-2def2d33-a7db-44b3-a7ef-6b2964943656

prefLabel

Ependymoma

treeView

urn:agi-folder:nerve_tissue

urn:agi-folder:nervous_system

urn:agi-folder:glioma

urn:agi-folder:e

subClassOf

urn:agi-folder:nerve_tissue

urn:agi-folder:nervous_system

urn:agi-folder:glioma

urn:agi-folder:e

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Delete Mapping To Ontology Source
http://www.ebi.ac.uk/efo/EFO_1000028 EFO LOOM
http://purl.obolibrary.org/obo/MONDO_0016698 MONDO LOOM
http://nanbyodata.jp/ontology/NANDO_2200088 NANDO LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#C04.557.580.625.600.380.290 RH-MESH LOOM
http://www.case.edu/EpSO.owl#Ependymoma MEPO LOOM
http://purl.bioontology.org/ontology/SNOMEDCT/443643007 SNOMEDCT LOOM
http://purl.jp/bio/4/id/200906039833943960 IOBC LOOM
http://www.orpha.net/ORDO/Orphanet_251636 ORDO LOOM
http://purl.obolibrary.org/obo/OMIT_0006046 OMIT LOOM
http://purl.obolibrary.org/obo/HP_0002888 EPIO LOOM
http://purl.obolibrary.org/obo/HP_0002888 HP LOOM
http://purl.obolibrary.org/obo/HP_0002888 UPHENO LOOM
http://purl.bioontology.org/ontology/SNOMEDCT/1186904005 SNOMEDCT LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C3017 NCIT LOOM
http://www.owl-ontologies.com/NPOntology.owl#DOID_4844 NATPRO LOOM
http://purl.obolibrary.org/obo/MPATH_247 MPATH LOOM
http://www.limics.org/hrdo/rdfns#pat_id_19666 HRDO LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#C04.557.465.625.600.380.290 RH-MESH LOOM
http://uri.neuinfo.org/nif/nifstd/birnlex_12622 NIFDYS LOOM
http://uri.neuinfo.org/nif/nifstd/birnlex_12622 NIFSTD LOOM
http://purl.bioontology.org/ontology/CSP/2012-5783 CRISP LOOM
http://www.phoc.org.cn/pmo/class/PMO_00085554 PMAPP-PMO LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0014474 OCHV LOOM
http://www.gamuts.net/entity#ependymoma GAMUTS LOOM
http://purl.bioontology.org/ontology/RCD/Xa994 RCD LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#Ependymoma CSEO LOOM
http://purl.bioontology.org/ontology/MEDDRA/10014967 MEDDRA LOOM
http://www.case.edu/EpilepsyOntology.owl#Ependymoma EPSO LOOM
http://localhost/plosthes.2017-1#402 PLOSTHES LOOM
http://purl.obolibrary.org/obo/NCIT_C3017 BERO LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#4535 OCHV LOOM
http://purl.bioontology.org/ontology/MESH/D004806 MESH LOOM
http://www.semanticweb.org/ontologies/2012/11/abnormalities.owl#phenodb:2398 IFAR LOOM
http://purl.bioontology.org/ontology/OMIM/MTHU008962 OMIM LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#C04.557.470.670.380.290 RH-MESH LOOM
http://purl.obolibrary.org/obo/MONDO_0016698 DOVES LOOM
http://bioontology.org/projects/ontologies/birnlex#birnlex_12622 BIRNLEX LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D004806 RH-MESH LOOM