Combined Phenotype Ontology

Last uploaded: November 18, 2021
Preferred Name

calcidiol

Synonyms

(3S,5Z,7E)-9,10-secocholesta-5,7,10(19)-triene-3,25-diol

Calcidiol

calcidiol

25-Hydroxyvitamin D3

calcifediol

(3S,5Z,7E)-9,10-secocholesta-5,7,10-triene-3,25-diol

25-hydroxyvitamin D3

Calcifediol anhydrous

25-hydroxycholecalciferol

calcifediolum

(3beta,5Z,7E)-9,10-secocholesta-5,7,10(19)-triene-3,25-diol

Calcifediol

(5Z,7E)-(3S)-9,10-secocholesta-5,7,10(19)-triene-3,25-diol

3-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANOL

25(OH)D3

Rayaldee

Definitions

A hydroxycalciol that is calciol in which the hydrogen at position 25 has been replaced by a hydroxy group. A prehormone resulting from the oxidation of calciol in the liver, it is further hydroxylated in the kidney to give calcitriol, the active form of vitamin D3.

ID

http://purl.obolibrary.org/obo/CHEBI_17933

charge

0

database_cross_reference

PDBeChem:VDY

KEGG:C01561

Drug_Central:464

PMID:18689406

PMID:9080330

Beilstein:4270041

PMID:22487892

PMID:23090338

LIPID_MAPS_instance:LMST03020246

PMID:16549446

CAS:19356-17-3

Wikipedia:Calcifediol

PMID:22536761

Reaxys:4270041

DrugBank:DB00146

PMID:23566108

definition

A hydroxycalciol that is calciol in which the hydrogen at position 25 has been replaced by a hydroxy group. A prehormone resulting from the oxidation of calciol in the liver, it is further hydroxylated in the kidney to give calcitriol, the active form of vitamin D3.

formula

C27H44O2

has exact synonym

(3S,5Z,7E)-9,10-secocholesta-5,7,10(19)-triene-3,25-diol

Calcidiol

calcidiol

has related synonym

25-Hydroxyvitamin D3

calcifediol

(3S,5Z,7E)-9,10-secocholesta-5,7,10-triene-3,25-diol

25-hydroxyvitamin D3

Calcifediol anhydrous

25-hydroxycholecalciferol

calcifediolum

(3beta,5Z,7E)-9,10-secocholesta-5,7,10(19)-triene-3,25-diol

Calcifediol

(5Z,7E)-(3S)-9,10-secocholesta-5,7,10(19)-triene-3,25-diol

3-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANOL

25(OH)D3

Rayaldee

has role

http://purl.obolibrary.org/obo/CHEBI_50646

http://purl.obolibrary.org/obo/CHEBI_77746

http://purl.obolibrary.org/obo/CHEBI_75771

http://purl.obolibrary.org/obo/CHEBI_25212

http://purl.obolibrary.org/obo/CHEBI_50733

has_alternative_id

CHEBI:46387

CHEBI:19815

CHEBI:13931

CHEBI:3304

has_obo_namespace

chebi_ontology

id

CHEBI:17933

in_subset

http://purl.obolibrary.org/obo/chebi#3_STAR

inchi

InChI=1S/C27H44O2/c1-19-10-13-23(28)18-22(19)12-11-21-9-7-17-27(5)24(14-15-25(21)27)20(2)8-6-16-26(3,4)29/h11-12,20,23-25,28-29H,1,6-10,13-18H2,2-5H3/b21-11+,22-12-/t20-,23+,24-,25+,27-/m1/s1

inchikey

JWUBBDSIWDLEOM-DTOXIADCSA-N

label

calcidiol

mass

400.63706

monoisotopicmass

400.33413

notation

CHEBI:17933

prefLabel

calcidiol

smiles

[H][C@@]1(CC[C@]2([H])[C@]1(C)CCC\C2=C/C=C1/C[C@@H](O)CCC1=C)[C@H](C)CCCC(C)(C)O

subClassOf

http://purl.obolibrary.org/obo/CHEBI_73558

http://purl.obolibrary.org/obo/CHEBI_47042

http://purl.obolibrary.org/obo/CHEBI_23824

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Delete Mapping To Ontology Source
http://purl.obolibrary.org/obo/CHEBI_17933 FOODON SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17933 PDRO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17933 DINTO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17933 CHEBI SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17933 GO-PLUS SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17933 BERO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17933 BIOMODELS SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17933 DRON SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17933 CDNO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17933 NIFSTD SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17933 ONSTR SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17933 HINO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17933 ZP SAME_URI
http://www.drugbank.ca/drugs/DB00146 FTC LOOM
http://purl.obolibrary.org/obo/CHEBI_17933 FOODON LOOM
http://purl.obolibrary.org/obo/CHEBI_17933 PDRO LOOM
http://purl.obolibrary.org/obo/CHEBI_17933 DINTO LOOM
http://purl.obolibrary.org/obo/CHEBI_17933 CHEBI LOOM
http://purl.obolibrary.org/obo/CHEBI_17933 GO-PLUS LOOM
http://purl.obolibrary.org/obo/CHEBI_17933 BERO LOOM
http://purl.obolibrary.org/obo/CHEBI_17933 BIOMODELS LOOM
http://purl.obolibrary.org/obo/CHEBI_17933 CDNO LOOM
http://purl.obolibrary.org/obo/CHEBI_17933 NIFSTD LOOM
http://purl.obolibrary.org/obo/CHEBI_17933 ONSTR LOOM
http://purl.obolibrary.org/obo/CHEBI_17933 HINO LOOM
http://purl.obolibrary.org/obo/CHEBI_17933 ZP LOOM
http://purl.bioontology.org/ontology/LNC/MTHU004919 LOINC LOOM