Uber Anatomy Ontology

Last uploaded: March 22, 2024
Preferred Name

basal ganglion

Synonyms

basal ganglion of telencephalon

basal nucleus

nuclei basales

basal ganglia

Definitions

An individual member of a collection of basal ganglia. Basal ganglia are subcortical masses of gray matter in the forebrain and midbrain that are richly interconnected and so viewed as a functional system. The nuclei usually included are the caudate nucleus (caudoputamen in rodents), putamen, globus pallidus, substantia nigra (pars compacta and pars reticulata) and the subthalamic nucleus. Some also include the nucleus accumbens and ventral pallidum[NIF,modified].

ID

http://purl.obolibrary.org/obo/UBERON_0002420

database_cross_reference

SCTID:244434001

BTO:0000235

EFO:0000904

CALOHA:TS-1149

DHBA:10332

FMA:62514

definition

An individual member of a collection of basal ganglia. Basal ganglia are subcortical masses of gray matter in the forebrain and midbrain that are richly interconnected and so viewed as a functional system. The nuclei usually included are the caudate nucleus (caudoputamen in rodents), putamen, globus pallidus, substantia nigra (pars compacta and pars reticulata) and the subthalamic nucleus. Some also include the nucleus accumbens and ventral pallidum[NIF,modified].

depiction

http://upload.wikimedia.org/wikipedia/commons/1/1b/Basal_Ganglia_and_Related_Structures.svg

editor note

it is necessary to introduce two classes, one representing an individual basal ganglion, another representing the aggregate structure, in order to have consistent classification amongst AOs (e.g. in MA the aygdala is part of the BG, in FMA and BTO it is a subclass). Apart from achieving this consistency, the value of having two distinct classes is questionable, since the BG-plural is trivially the set of all BGs-singular. it would be better for all AOs to decide on one single way of doing this. Do not merge until this is done.

has_exact_synonym

basal ganglion of telencephalon

has_obo_namespace

uberon

has_related_synonym

basal nucleus

nuclei basales

basal ganglia

id

UBERON:0002420

in_subset

http://purl.obolibrary.org/obo/uberon/core#efo_slim

http://purl.obolibrary.org/obo/uberon/core#pheno_slim

http://purl.obolibrary.org/obo/uberon/core#uberon_slim

label

basal ganglion

notation

UBERON:0002420

part_of

http://purl.obolibrary.org/obo/UBERON_0010011

prefLabel

basal ganglion

treeView

http://purl.obolibrary.org/obo/UBERON_0010011

subClassOf

http://purl.obolibrary.org/obo/UBERON_0003528

http://purl.obolibrary.org/obo/UBERON_0007245

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Delete Mapping To Ontology Source
http://purl.obolibrary.org/obo/UBERON_0002420 DOID SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002420 GO-PLUS SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002420 DOID SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002420 OBA SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002420 CL SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002420 HOIP SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002420 EFO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002420 NPOKB SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002420 OBI_BCGO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002420 PCL SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002420 EPIO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002420 HHEAR SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002420 UPHENO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002420 NIFSTD SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002420 CCF SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002420 FNS-H SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002420 DOID LOOM
http://purl.obolibrary.org/obo/UBERON_0002420 GO-PLUS LOOM
http://purl.obolibrary.org/obo/UBERON_0002420 EFO LOOM
http://purl.obolibrary.org/obo/UBERON_0002420 CL LOOM
http://purl.obolibrary.org/obo/UBERON_0002420 HOIP LOOM
http://purl.obolibrary.org/obo/UBERON_0002420 DOID LOOM
http://purl.obolibrary.org/obo/UBERON_0002420 OBA LOOM
http://purl.obolibrary.org/obo/XAO_0004540 XPO LOOM
http://purl.obolibrary.org/obo/BTO_0000235 DTO LOOM
http://purl.obolibrary.org/obo/BTO_0000235 BTO LOOM
http://purl.org/sig/ont/fma/fma321900 FMA LOOM
http://purl.obolibrary.org/obo/UBERON_0002420 NPOKB LOOM
http://purl.obolibrary.org/obo/UBERON_0002420 OBI_BCGO LOOM
http://purl.obolibrary.org/obo/UBERON_0002420 PCL LOOM
http://purl.obolibrary.org/obo/UBERON_0002420 EPIO LOOM
http://purl.obolibrary.org/obo/UBERON_0002420 HHEAR LOOM
http://purl.obolibrary.org/obo/UBERON_0002420 UPHENO LOOM
http://purl.obolibrary.org/obo/UBERON_0002420 NIFSTD LOOM
http://purl.obolibrary.org/obo/UBERON_0002420 CCF LOOM
http://purl.obolibrary.org/obo/UBERON_0002420 FNS-H LOOM
http://purl.obolibrary.org/obo/XAO_0004540 UPHENO LOOM
http://purl.obolibrary.org/obo/XAO_0004540 XAO LOOM
http://purl.obolibrary.org/obo/MAT_0000450 MAT LOOM