The Drug Ontology

Last uploaded: March 3, 2024
Preferred Name

vitamin B12

Synonyms

cyanocob(III)alamin

Cyanocob(III)alamin

Coalpha-[alpha-(5,6-dimethylbenzimidazolyl)]-Cobeta-cyanocobamide

CO-CYANOCOBALAMIN

vitamin B-12

Vitamin B12 complex

cyanocobalamin

CN-Cbl

Dicopac

Definitions

A complex cob(III)alamin in which cobalt is positioned in the centre of a planar corrin tetrapyrrole ring and bound axially to a 5,6-dimethylbenzimidazole moiety and a cyano group. It is one of several forms of the vitamin known as vitamin B12.

ID

http://purl.obolibrary.org/obo/CHEBI_17439

charge

0

database_cross_reference

KNApSAcK:C00001534

PMID:29286160

Gmelin:249901

DrugBank:DB00115

CAS:68-19-9

PDBeChem:CNC

Gmelin:457955

KEGG:D00166

KEGG:C02823

definition

A complex cob(III)alamin in which cobalt is positioned in the centre of a planar corrin tetrapyrrole ring and bound axially to a 5,6-dimethylbenzimidazole moiety and a cyano group. It is one of several forms of the vitamin known as vitamin B12.

formula

C63H88CoN14O14P

has_alternative_id

CHEBI:48820

CHEBI:23435

CHEBI:60496

CHEBI:14041

CHEBI:3979

has_exact_synonym

cyanocob(III)alamin

Cyanocob(III)alamin

Coalpha-[alpha-(5,6-dimethylbenzimidazolyl)]-Cobeta-cyanocobamide

has_obo_namespace

chebi_ontology

has_related_synonym

CO-CYANOCOBALAMIN

vitamin B-12

Vitamin B12 complex

cyanocobalamin

CN-Cbl

Dicopac

has_RxCUI

11248

id

CHEBI:17439

in_subset

http://purl.obolibrary.org/obo/chebi#3_STAR

inchi

InChI=1S/C62H90N13O14P.CN.Co/c1-29-20-39-40(21-30(29)2)75(28-70-39)57-52(84)53(41(27-76)87-57)89-90(85,86)88-31(3)26-69-49(83)18-19-59(8)37(22-46(66)80)56-62(11)61(10,25-48(68)82)36(14-17-45(65)79)51(74-62)33(5)55-60(9,24-47(67)81)34(12-15-43(63)77)38(71-55)23-42-58(6,7)35(13-16-44(64)78)50(72-42)32(4)54(59)73-56;1-2;/h20-21,23,28,31,34-37,41,52-53,56-57,76,84H,12-19,22,24-27H2,1-11H3,(H15,63,64,65,66,67,68,69,71,72,73,74,77,78,79,80,81,82,83,85,86);;/q;;+2/p-2/t31-,34-,35-,36-,37+,41-,52-,53-,56-,57+,59-,60+,61+,62+;;/m1../s1

inchikey

RMRCNWBMXRMIRW-WZHZPDAFSA-L

label

cyanocob(III)alamin

Vitamin B 12

vitamin B12

mass

1355.36520

monoisotopicmass

1354.56740

notation

CHEBI:17439

prefLabel

vitamin B12

smiles

[H][C@@]1(C)CNC(=O)CC[C@]2(C)[C@@H](CC(N)=O)[C@@]3([H])N4C2=C(C)C2=[N+]5C(=CC6=[N+]7C(=C(C)C8=[N+]([C@]3(C)[C@@](C)(CC(N)=O)[C@@H]8CCC(N)=O)[Co-3]457(C#N)[n+]3cn([C@H]4O[C@H](CO)[C@@H](OP([O-])(=O)O1)[C@H]4O)c1cc(C)c(C)cc31)[C@@](C)(CC(N)=O)[C@@H]6CCC(N)=O)C(C)(C)[C@@H]2CCC(N)=O

subClassOf

http://purl.obolibrary.org/obo/CHEBI_140785

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http://purl.obolibrary.org/obo/CHEBI_17439 MAXO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17439 FOODON SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17439 PDRO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17439 CHEBI SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17439 GO-PLUS SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17439 BIPON SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17439 BERO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17439 BIOMODELS SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17439 FOBI SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17439 CDNO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17439 UPHENO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17439 ONSTR SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17439 MAXO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_17439 ZP SAME_URI
http://purl.obolibrary.org/obo/CHEBI_176843 MAXO LOOM
http://purl.bioontology.org/ontology/RXNORM/11248 RXNORM LOOM
http://scai.fraunhofer.de/AlzheimerOntology#vitamin_B12 ADO LOOM
https://www.fns-cloud.eu/foodComponents/FNS_H_0000003483 FNS-H LOOM
http://purl.bioontology.org/ontology/MEDDRA/10047602 MEDDRA LOOM
http://purl.jp/bio/4/id/200906090879069730 IOBC LOOM
http://www.w3.org/2003/11/swrl#VitaminB12 EMIF-AD LOOM
http://www.co-ode.org/ontologies/galen#VitaminB12 GALEN LOOM
https://bioportal.bioontology.org/ontologies/STMSO#Vitamin_B12 STMSO LOOM
http://purl.bioontology.org/ontology/MESH/D014805 MESH LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0042845 OCHV LOOM
http://purl.bioontology.org/ontology/SNMI/F-BB360 SNMI LOOM
http://purl.bioontology.org/ontology/LNC/LP31689-0 LOINC LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#13050 OCHV LOOM
http://purl.bioontology.org/ontology/RCD/X80RX RCD LOOM
http://purl.obolibrary.org/obo/CHEBI_176843 FOODON LOOM
http://purl.obolibrary.org/obo/CHEBI_176843 PDRO LOOM
http://purl.obolibrary.org/obo/CHEBI_176843 CHEBI LOOM
http://purl.obolibrary.org/obo/CHEBI_176843 GO-PLUS LOOM
http://purl.obolibrary.org/obo/CHEBI_176843 BERO LOOM
http://purl.obolibrary.org/obo/CHEBI_176843 OBA LOOM
http://purl.obolibrary.org/obo/CHEBI_176843 CDNO LOOM
http://purl.obolibrary.org/obo/CHEBI_176843 UPHENO LOOM
http://purl.obolibrary.org/obo/CHEBI_176843 NIFSTD LOOM
http://purl.obolibrary.org/obo/CHEBI_176843 MAXO LOOM
http://purl.obolibrary.org/obo/CHEBI_176843 ZP LOOM
http://purl.obolibrary.org/obo/MESH_D014805 BERO LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D014805 RH-MESH LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D03.549.909.437.777 RH-MESH LOOM
http://doe-generated-ontology.com/OntoAD#C0042845 ONTOAD LOOM
http://purl.obolibrary.org/obo/OMIT_0015634 OMIT LOOM
http://www.co-ode.org/ontologies/ont.owl#Vitamin_B12 DILON LOOM
http://scai.fraunhofer.de/MSOntology#Vitamin_B12 MSO LOOM
http://purl.obolibrary.org/obo/CHEBI_17439 PDRO LOOM
http://www.phoc.org.cn/pmo/class/PMO_00018078 PMAPP-PMO LOOM
http://purl.bioontology.org/ontology/CSP/3147-6039 CRISP LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D04.345.783.437.777 RH-MESH LOOM
http://www.icn.ch/icnp#VitaminB12 ICNP LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D03.383.129.578.840.437.777 RH-MESH LOOM