Uber Anatomy Ontology

Last uploaded: March 22, 2024
Preferred Name

collection of basal ganglia

Synonyms

set of basal ganglia

basal ganglia set

basal nuclei (basal ganglia)

basal ganglia

set of basal nuclei

cerebral nuclei

subcortical nuclei

basal nuclei

Definitions

Subcortical masses of gray matter in the forebrain and midbrain that are richly interconnected and so viewed as a functional system. The nuclei usually included are the caudate nucleus (caudoputamen in rodents), putamen, globus pallidus, substantia nigra (pars compacta and pars reticulata) and the subthalamic nucleus. Some also include the nucleus accumbens and ventral pallidum.

ID

http://purl.obolibrary.org/obo/UBERON_0010011

database_cross_reference

Wikipedia:Basal_ganglia

EMAPA:32673

MESH:D001479

NCIT:C12447

UMLS:C0004781

neuronames:2677

VHOG:0001696

BIRNLEX:826

BAMS:BG

BM:Tel-BG

FMA:84013

GAID:617

HBA:4276

MA:0000184

MBA:623

PBA:4001

definition

Subcortical masses of gray matter in the forebrain and midbrain that are richly interconnected and so viewed as a functional system. The nuclei usually included are the caudate nucleus (caudoputamen in rodents), putamen, globus pallidus, substantia nigra (pars compacta and pars reticulata) and the subthalamic nucleus. Some also include the nucleus accumbens and ventral pallidum.

editor note

it is necessary to introduce two classes, one representing an individual basal ganglion, another representing the aggregate structure, in order to have consistent classification amongst AOs (e.g. in MA the aygdala is part of the BG, in FMA and BTO it is a subclass). Apart from achieving this consistency, the value of having two distinct classes is questionable, since the BG-plural is trivially the collection of all BGs-singular. it would be better for all AOs to decide on one single way of doing this. Do not merge until this is done.

has_exact_synonym

set of basal ganglia

basal ganglia set

basal nuclei (basal ganglia)

basal ganglia

has_obo_namespace

uberon

has_related_synonym

set of basal nuclei

cerebral nuclei

subcortical nuclei

basal nuclei

homology_notes

All nuclei of the mammalian basal ganglia are also present in the oldest vertebrates.[well established][VHOG]

id

UBERON:0010011

in_subset

http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas

http://purl.obolibrary.org/obo/uberon/core#pheno_slim

label

collection of basal ganglia

notation

UBERON:0010011

overlaps

http://purl.obolibrary.org/obo/UBERON_0001893

http://purl.obolibrary.org/obo/UBERON_0001891

part_of

http://purl.obolibrary.org/obo/UBERON_0000454

prefLabel

collection of basal ganglia

present_in_taxon

http://purl.obolibrary.org/obo/NCBITaxon_9606

treeView

http://purl.obolibrary.org/obo/UBERON_0000454

subClassOf

http://purl.obolibrary.org/obo/UBERON_0010009

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