Xenopus Phenotype Ontology

Last uploaded: April 21, 2024
Preferred Name

camera-type eye
Synonyms

vertebrate eye

orbital region

camera-type eye plus associated structures

orbital part of face

eyes

eye

regio orbitalis

Definitions

An organ of sight that includes the camera-type eyeball and supporting structures such as the lacrimal apparatus, the conjunctiva, the eyelid.

ID

http://purl.obolibrary.org/obo/UBERON_0000019

BSPO_0000126

http://purl.obolibrary.org/obo/UBERON_0000033

database_cross_reference

NCIT:C12401

UMLS:C1280202

BTO:0004688

ZFA:0000107

XAO:0000179

BIRNLEX:1169

VHOG:0000275

AAO:0010340

SCTID:181143004

EMAPA:16198

UMLS:C0015392

TAO:0000107

EHDAA2:0000484

EHDAA:936

FMA:54448

MA:0000261

definition

An organ of sight that includes the camera-type eyeball and supporting structures such as the lacrimal apparatus, the conjunctiva, the eyelid.

develops_from

http://purl.obolibrary.org/obo/UBERON_0003072

existence ends during

http://purl.obolibrary.org/obo/UBERON_0000066

existence ends during or before

http://purl.obolibrary.org/obo/UBERON_0000066

has part

http://purl.obolibrary.org/obo/UBERON_0000966

http://purl.obolibrary.org/obo/UBERON_0000965

has_exact_synonym

regio orbitalis

has_narrow_synonym

vertebrate eye

hasBroadSynonym

eye

hasOBONamespace

uberon

hasRelatedSynonym

orbital region

camera-type eye plus associated structures

orbital part of face

eyes

id

UBERON:0000019

inSubset

http://purl.obolibrary.org/obo/uberon/core#vertebrate_core

http://purl.obolibrary.org/obo/uberon/core#pheno_slim

http://purl.obolibrary.org/obo/uberon/core#uberon_slim

label

camera-type eye

notation

UBERON:0000019

overlaps

http://purl.obolibrary.org/obo/UBERON_0000966

http://purl.obolibrary.org/obo/UBERON_0000965

part_of

http://purl.obolibrary.org/obo/UBERON_0004088

prefLabel

camera-type eye

treeView

http://purl.obolibrary.org/obo/UBERON_0003072

http://purl.obolibrary.org/obo/UBERON_0004088

UBPROP_0000001

A cavitated compound organ that transduces light waves into neural signals.[TAO]

UBPROP_0000003

The eye of the adult lamprey is remarkably similar to our own, and it possesses numerous features (including the expression of opsin genes) that are very similar to those of the eyes of jawed vertebrates. The lamprey's camera-like eye has a lens, an iris and extra-ocular muscles (five of them, unlike the eyes of jawed vertebrates, which have six), although it lacks intra-ocular muscles. Its retina also has a structure very similar to that of the retinas of other vertebrates, with three nuclear layers comprised of the cell bodies of photoreceptors and bipolar, horizontal, amacrine and ganglion cells. The southern hemisphere lamprey, Geotria australis, possesses five morphological classes of retinal photoreceptor and five classes of opsin, each of which is closely related to the opsins of jawed vertebrates. Given these similarities, we reach the inescapable conclusion that the last common ancestor of jawless and jawed vertebrates already possessed an eye that was comparable to that of extant lampreys and gnathostomes. Accordingly, a vertebrate camera-like eye must have been present by the time that lampreys and gnathostomes diverged, around 500 Mya.[well established][VHOG]

UBPROP_0000012

FMA distinguishes Eye (subdivision of face) which has its parts an Eyeball (organ), as well as other structures, and the orbit of skull. MA includes eyelid, conjunctiva and lacrimal apparatus as part of MA:eye - consistent with FMA - so we can infer that MA:eye is more like FMA:eye than FMA:eyeball. For other AOs this distinction is less meaningful - e.g. ZFA has no eyelid; XAO has no eyelid, but it has conjuctiva, which is considered part of the xao:eye. GO considers eyelid development part of eye development. See also notes on optic nerve - XAO, AAO and BTO consider this part of the eye. MA considers the eye muscles part of the eye, whereas FMA has a class 'orbital content' for this

subClassOf

http://purl.obolibrary.org/obo/UBERON_0000047

http://purl.obolibrary.org/obo/UBERON_0015212

http://purl.obolibrary.org/obo/UBERON_0004121

http://purl.obolibrary.org/obo/UBERON_0010314

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Delete Mapping To Ontology Source
http://purl.obolibrary.org/obo/UBERON_0000019 CL SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 NPOKB SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 OAE SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 UBERON SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 CLO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 OHPI SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 GCBO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 CCONT SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 FOVT SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 OCMR SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 RBO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 EFO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 ENVO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 PCL SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 MONDO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 PATO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 NIFDYS SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 GO-PLUS SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 BERO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 EFO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 NBO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 HHEAR SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 HRA SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 UPHENO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 NIFSTD SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 ECAO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 KTAO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 MAXO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 FNS-H SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 AISM SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 NMDCO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 OBA SAME_URI
http://purl.obolibrary.org/obo/UBERON_0000019 CL LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 NPOKB LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 OAE LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 UBERON LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 CLO LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 OHPI LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 GCBO LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 CCONT LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 FOVT LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 OCMR LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 RBO LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 EFO LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 ENVO LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 PCL LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 PATO LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 NIFDYS LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 GO-PLUS LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 EFO LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 NBO LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 HHEAR LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 HRA LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 UPHENO LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 NIFSTD LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 ECAO LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 KTAO LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 MAXO LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 FNS-H LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 AISM LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 NMDCO LOOM
http://purl.obolibrary.org/obo/UBERON_0000019 OBA LOOM
https://github.com/sap218/ocimido/blob/master/ontology/ocimido.owl#OCIMIDO_00228 OCIMIDO LOOM