PMO Precision Medicine Ontology

Last uploaded: December 16, 2020
Preferred Name

Synapse

Synonyms
Definitions

"The junction between a nerve fiber of one neuron and another neuron, muscle fiber or glial cell. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane." [ISBN:0198506732]

ID

http://www.phoc.org.cn/pmo/class/PMO_00055465

Database_Cross_Reference

GO:0045202

Definition

"The junction between a nerve fiber of one neuron and another neuron, muscle fiber or glial cell. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane." [ISBN:0198506732]

Gene Annotation

SLC4A10(UniProtKB:Q6U841)

SPART(UniProtKB:Q8N0X7)

CHRNB1(UniProtKB:P11230)

MYO7A(UniProtKB:Q13402)

SARM1(UniProtKB:Q6SZW1)

SDK1(UniProtKB:Q7Z5N4)

CAPRIN1(UniProtKB:Q14444)

RPL3(UniProtKB:P39023)

PICK1(UniProtKB:Q9NRD5)

CALB1(UniProtKB:P05937)

MAPK8IP1(UniProtKB:Q9UQF2)

RPS4X(UniProtKB:P62701)

RIMS1(UniProtKB:Q86UR5)

SPG11(UniProtKB:Q96JI7)

CBLN3(UniProtKB:Q6UW01)

C4B(UniProtKB:P0C0L5)

RASGRP2(UniProtKB:Q7LDG7)

PCDH15(UniProtKB:Q96QU1)

SCGN(UniProtKB:O76038)

GABRD(UniProtKB:O14764)

GABRR1(UniProtKB:P24046)

CHRNA9(UniProtKB:Q9UGM1)

EEF1A2(UniProtKB:Q05639)

CALB2(UniProtKB:P22676)

AKR1A1(UniProtKB:P14550)

CYFIP2(UniProtKB:Q96F07)

MACO1(UniProtKB:Q8N5G2)

ZACN(UniProtKB:Q401N2)

DSCAM(UniProtKB:O60469)

PACSIN1(UniProtKB:Q9BY11)

RTN3(UniProtKB:O95197)

DVL1(UniProtKB:O14640)

OLFM3(UniProtKB:Q96PB7)

RPL24(UniProtKB:P83731)

DOK7(UniProtKB:Q18PE1)

RPH3A(UniProtKB:Q9Y2J0)

FGB(UniProtKB:P02675)

PIAS3(UniProtKB:Q9Y6X2)

KCNK1(UniProtKB:O00180)

SNAPIN(UniProtKB:O95295)

GABRR2(UniProtKB:P28476)

NLGN2(UniProtKB:Q8NFZ4)

MAP1B(UniProtKB:P46821)

EMB(UniProtKB:Q6PCB8)

CPEB4(UniProtKB:Q17RY0)

CHRNA10(UniProtKB:Q9GZZ6)

NAPG(UniProtKB:Q99747)

ADGRL1(UniProtKB:O94910)

EGFR(UniProtKB:P00533)

DSCAML1(UniProtKB:Q8TD84)

DNM1(UniProtKB:Q05193)

AP3B1(UniProtKB:O00203)

GABRP(UniProtKB:O00591)

SYN2(UniProtKB:Q92777)

DARS(UniProtKB:P14868)

CHRNA5(UniProtKB:P30532)

PSMA3(UniProtKB:P25788)

NLGN1(UniProtKB:Q8N2Q7)

RIMS4(UniProtKB:Q9H426)

APBB1(UniProtKB:O00213)

HTR3B(UniProtKB:O95264)

RPS17(UniProtKB:P08708)

KCNA1(UniProtKB:Q09470)

SLC4A7(UniProtKB:Q9Y6M7)

ARFGAP1(UniProtKB:Q8N6T3)

RGS12(UniProtKB:O14924)

MTHFR(UniProtKB:P42898)

CAMK2B(UniProtKB:Q13554)

CHRNA4(UniProtKB:P43681)

ARL8A(UniProtKB:Q96BM9)

SNTB2(UniProtKB:Q13425)

CLU(UniProtKB:P10909)

C1QB(UniProtKB:P02746)

SHISA6(UniProtKB:Q6ZSJ9)

RPS23(UniProtKB:P62266)

C1QC(UniProtKB:P02747)

EIF2S1(UniProtKB:P05198)

VWC2(UniProtKB:Q2TAL6)

PHACTR1(UniProtKB:Q9C0D0)

GABRB1(UniProtKB:P18505)

GPC2(UniProtKB:Q8N158)

ITGB3(UniProtKB:P05106)

MAP1LC3A(UniProtKB:Q9H492)

CHRNA7(UniProtKB:P36544)

GABRB2(UniProtKB:P47870)

CHRNB2(UniProtKB:P17787)

ITGA5(UniProtKB:P08648)

LIN7C(UniProtKB:Q9NUP9)

NDFIP1(UniProtKB:Q9BT67)

CADM1(UniProtKB:Q9BY67)

DLG4(UniProtKB:P78352)

LIN7A(UniProtKB:O14910)

CHRNE(UniProtKB:Q04844)

PGRMC1(UniProtKB:O00264)

KCNC2(UniProtKB:Q96PR1)

C4A(UniProtKB:P0C0L4)

SAMD4A(UniProtKB:Q9UPU9)

PPFIA4(UniProtKB:O75335)

VWC2L(UniProtKB:B2RUY7)

DNM2(UniProtKB:P50570)

DPYSL3(UniProtKB:Q14195)

EEF2(UniProtKB:P13639)

PDZD11(UniProtKB:Q5EBL8)

EGFLAM(UniProtKB:Q63HQ2)

GDI2(UniProtKB:P50395)

RPL37(UniProtKB:P61927)

PPP2CA(UniProtKB:P67775)

SNTA1(UniProtKB:Q13424)

EFNB1(UniProtKB:P98172)

HTR3D(UniProtKB:Q70Z44)

TUFM(UniProtKB:P49411)

SLITRK1(UniProtKB:Q96PX8)

PAK5(UniProtKB:Q9P286)

LIN7B(UniProtKB:Q9HAP6)

GABRB3(UniProtKB:P28472)

PTPRZ1(UniProtKB:P23471)

TLN2(UniProtKB:Q9Y4G6)

DACT1(UniProtKB:Q9NYF0)

ATCAY(UniProtKB:Q86WG3)

YWHAQ(UniProtKB:P27348)

ACHE(UniProtKB:P22303)

MDM2(UniProtKB:Q00987)

CBLN4(UniProtKB:Q9NTU7)

CNTN2(UniProtKB:Q02246)

C1QA(UniProtKB:P02745)

CHRNB4(UniProtKB:P30926)

MME(UniProtKB:P08473)

WHRN(UniProtKB:Q9P202)

NLGN4X(UniProtKB:Q8N0W4)

MPST(UniProtKB:P25325)

CHRNA6(UniProtKB:Q15825)

GRID2(UniProtKB:O43424)

CEL(UniProtKB:P19835)

GABRA3(UniProtKB:P34903)

RAB21(UniProtKB:Q9UL25)

NRN1(UniProtKB:Q9NPD7)

GLRB(UniProtKB:P48167)

ARL8B(UniProtKB:Q9NVJ2)

CHRNA3(UniProtKB:P32297)

GLRA4(UniProtKB:Q5JXX5)

APBA2(UniProtKB:Q99767)

RPS2(UniProtKB:P15880)

CORO1C(UniProtKB:Q9ULV4)

RPS21(UniProtKB:P63220)

GLRA3(UniProtKB:O75311)

PTPRN(UniProtKB:Q16849)

DGKI(UniProtKB:O75912)

FABP5(UniProtKB:Q01469)

RAPGEF2(UniProtKB:Q9Y4G8)

RPS9(UniProtKB:P46781)

VAMP2(UniProtKB:P63027)

GABRG3(UniProtKB:Q99928)

MAP1S(UniProtKB:Q66K74)

HTR2B(UniProtKB:P41595)

GLRA2(UniProtKB:P23416)

USH1C(UniProtKB:Q9Y6N9)

CPEB3(UniProtKB:Q8NE35)

HTR3A(UniProtKB:P46098)

ZMYND19(UniProtKB:Q96E35)

FMR1(UniProtKB:Q06787)

NLGN4Y(UniProtKB:Q8NFZ3)

PCLO(UniProtKB:Q9Y6V0)

SRCIN1(UniProtKB:Q9C0H9)

GABRR3(UniProtKB:A8MPY1)

ATP1A3(UniProtKB:P13637)

APBB2(UniProtKB:Q92870)

DMD(UniProtKB:P11532)

DNM3(UniProtKB:Q9UQ16)

SHISA8(UniProtKB:B8ZZ34)

CDH2(UniProtKB:P19022)

SLC16A1(UniProtKB:P53985)

UNC5C(UniProtKB:O95185)

RPS6KB1(UniProtKB:P23443)

TULP1(UniProtKB:O00294)

GPC4(UniProtKB:O75487)

RPS7(UniProtKB:P62081)

SHISA7(UniProtKB:A6NL88)

XRN1(UniProtKB:Q8IZH2)

TTYH1(UniProtKB:Q9H313)

CHRNA1(UniProtKB:P02708)

NLGN3(UniProtKB:Q9NZ94)

SNTB1(UniProtKB:Q13884)

WASF2(UniProtKB:Q9Y6W5)

SH3KBP1(UniProtKB:Q96B97)

CHRNG(UniProtKB:P07510)

SLC6A4(UniProtKB:P31645)

GABRA5(UniProtKB:P31644)

LZTS3(UniProtKB:O60299)

GABRA4(UniProtKB:P48169)

GABRQ(UniProtKB:Q9UN88)

PLAA(UniProtKB:Q9Y263)

HTR3C(UniProtKB:Q8WXA8)

CYFIP1(UniProtKB:Q7L576)

TRAPPC4(UniProtKB:Q9Y296)

H3BNC9(UniProtKB:H3BNC9)

CADM2(UniProtKB:Q8N3J6)

ASIC1(UniProtKB:P78348)

GPC6(UniProtKB:Q9Y625)

HNRNPD(UniProtKB:Q14103)

LRRC7(UniProtKB:Q96NW7)

MYO9A(UniProtKB:B2RTY4)

GABRG1(UniProtKB:Q8N1C3)

GABRA6(UniProtKB:Q16445)

FLRT2(UniProtKB:O43155)

GRIN1(UniProtKB:Q05586)

ERC1(UniProtKB:Q8IUD2)

OLFM1(UniProtKB:Q99784)

USP14(UniProtKB:P54578)

FBXO45(UniProtKB:P0C2W1)

DNMBP(UniProtKB:Q6XZF7)

DTNA(UniProtKB:Q9Y4J8)

AGRN(UniProtKB:O00468)

SDK2(UniProtKB:Q58EX2)

HAPLN1(UniProtKB:P10915)

APP(UniProtKB:P05067)

MYRIP(UniProtKB:Q8NFW9)

RPLP2(UniProtKB:P05387)

GABRA1(UniProtKB:P14867)

CPEB1(UniProtKB:Q9BZB8)

MAP1A(UniProtKB:P78559)

GABRA2(UniProtKB:P47869)

RGS17(UniProtKB:Q9UGC6)

SLC5A7(UniProtKB:Q9GZV3)

FAM107A(UniProtKB:O95990)

CTNNB1(UniProtKB:P35222)

LRP6(UniProtKB:O75581)

TENM2(UniProtKB:Q9NT68)

RIMS2(UniProtKB:Q9UQ26)

RIMBP2(UniProtKB:O15034)

LYPD6(UniProtKB:Q86Y78)

ENAH(UniProtKB:Q8N8S7)

PSMC4(UniProtKB:P43686)

SCRIB(UniProtKB:Q14160)

GPC1(UniProtKB:P35052)

EIF3B(UniProtKB:P55884)

CHRND(UniProtKB:Q07001)

MAGI2(UniProtKB:Q86UL8)

CABP4(UniProtKB:P57796)

ADGRV1(UniProtKB:Q8WXG9)

RIMS3(UniProtKB:Q9UJD0)

STX4(UniProtKB:Q12846)

GABRE(UniProtKB:P78334)

NSMF(UniProtKB:Q6X4W1)

NMNAT2(UniProtKB:Q9BZQ4)

CPEB2(UniProtKB:Q7Z5Q1)

ARR3(UniProtKB:P36575)

FGA(UniProtKB:P02671)

CHRNB3(UniProtKB:Q05901)

PRIMA1(UniProtKB:Q86XR5)

NOS1(UniProtKB:P29475)

APBA1(UniProtKB:Q02410)

CHRNA2(UniProtKB:Q15822)

EXOC4(UniProtKB:Q96A65)

GLRA1(UniProtKB:P23415)

SHISA9(UniProtKB:B4DS77)

QKI(UniProtKB:Q96PU8)

RAB18(UniProtKB:Q9NP72)

FRRS1L(UniProtKB:Q9P0K9)

CHRFAM7A(UniProtKB:Q494W8)

APBA3(UniProtKB:O96018)

GRIN3A(UniProtKB:Q8TCU5)

NDE1(UniProtKB:Q9NXR1)

GABRG2(UniProtKB:P18507)

ACTB(UniProtKB:P60709)

FZD5(UniProtKB:Q13467)

HTR3E(UniProtKB:A5X5Y0)

MKLN1(UniProtKB:Q9UL63)

label

Synapse

MCID

MC04786006

PMOID

PMO:00055465

prefixIRI

pmo:PMO_00055465

prefLabel

Synapse

Synonym

"synaptic junction" EXACT []

"electrotonic synapse" RELATED [NIF_Subcellular:sao1311109124]

"mixed synapse" NARROW [NIF_Subcellular:sao1506103497]

Tree Number

T10.3.12

subClassOf

http://www.phoc.org.cn/pmo/class/PMO_00051302

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Delete Mapping To Ontology Source
http://purl.obolibrary.org/obo/GO_0045202 UBERON LOOM
http://purl.obolibrary.org/obo/GO_0045202 RBO LOOM
http://purl.obolibrary.org/obo/GO_0045202 OBA LOOM
http://purl.obolibrary.org/obo/GO_0045202 MAXO LOOM
http://www.semanticweb.org/latitude_user/ontologies/2014/8/untitled-ontology-7#Synapse BRCT LOOM
http://ccdb.ucsd.edu/SAO/1.2#sao914572699 SAO LOOM
http://purl.org/obo/owl/GO#GO_0045202 BIOMODELS LOOM
http://www.co-ode.org/ontologies/galen#Synapse GALEN LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0039062 OCHV LOOM
http://purl.obolibrary.org/obo/GO_0045202 NIGO LOOM
http://purl.obolibrary.org/obo/GO_0045202 CL LOOM
http://purl.obolibrary.org/obo/GO_0045202 RBO LOOM
http://purl.obolibrary.org/obo/GO_0045202 GO-EXT LOOM
http://purl.obolibrary.org/obo/GO_0045202 UBERON LOOM
http://purl.obolibrary.org/obo/GO_0045202 CLO LOOM
http://purl.obolibrary.org/obo/GO_0045202 PLANP LOOM
http://purl.obolibrary.org/obo/GO_0045202 GCBO LOOM
http://purl.obolibrary.org/obo/GO_0045202 FOVT LOOM
http://purl.obolibrary.org/obo/GO_0045202 CCO LOOM
http://purl.obolibrary.org/obo/GO_0045202 REXO LOOM
http://purl.obolibrary.org/obo/GO_0045202 EFO LOOM
http://purl.obolibrary.org/obo/GO_0045202 GEXO LOOM
http://purl.obolibrary.org/obo/GO_0045202 XPO LOOM
http://purl.obolibrary.org/obo/GO_0045202 PHAGE LOOM
http://purl.obolibrary.org/obo/GO_0045202 GO-PLUS LOOM
http://purl.obolibrary.org/obo/GO_0045202 PCL LOOM
http://purl.obolibrary.org/obo/GO_0045202 PATO LOOM
http://purl.obolibrary.org/obo/GO_0045202 NIFDYS LOOM
http://purl.obolibrary.org/obo/GO_0045202 BERO LOOM
http://purl.obolibrary.org/obo/GO_0045202 HHEAR LOOM
http://purl.obolibrary.org/obo/GO_0045202 OBA LOOM
http://purl.obolibrary.org/obo/GO_0045202 UPHENO LOOM
http://purl.obolibrary.org/obo/GO_0045202 NIFSTD LOOM
http://purl.obolibrary.org/obo/GO_0045202 KTAO LOOM
http://purl.obolibrary.org/obo/GO_0045202 REGN_GO LOOM
http://purl.obolibrary.org/obo/GO_0045202 GO LOOM
http://purl.obolibrary.org/obo/GO_0045202 RETO LOOM
http://purl.obolibrary.org/obo/GO_0045202 MAXO LOOM
http://purl.obolibrary.org/obo/GO_0045202 ZP LOOM
http://purl.obolibrary.org/obo/GO_0045202 AISM LOOM
http://purl.obolibrary.org/obo/GO_0045202 NMDCO LOOM
http://uri.neuinfo.org/nif/nifstd/sao914572699 NIFSTD LOOM
http://www.semanticweb.org/ontologies/2009/3/EpilepsyOntology.owl#Synapse EPILONT LOOM
http://www.semanticweb.org/ontologies/2009/3/EpilepsyOntology.owl#Synapse MEPO LOOM
http://purl.org/sig/ont/fma/fma67408 FMA LOOM
http://purl.bioontology.org/ontology/CSP/2047-3201 CRISP LOOM
http://purl.org/obo/owlapi/fma#FMA_67408 BIOMODELS LOOM
http://purl.jp/bio/4/id/200906038698776815 IOBC LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C13281 NCIT LOOM
http://www.projecthalo.com/aura#Synapse AURA LOOM
http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Subcellular.owl#sao914572699 NIFSUBCELL LOOM
http://purl.bioontology.org/ontology/SNMI/T-A0380 SNMI LOOM
http://purl.obolibrary.org/obo/NCIT_C13281 BERO LOOM
http://purl.obolibrary.org/obo/FBbt_00005114 FB-BT LOOM
urn:agi-folder:synapse BPT LOOM
http://scai.fraunhofer.de/MSOntology#Synapse MSO LOOM
http://scai.fraunhofer.de/AlzheimerOntology#Synapse ADO LOOM
http://purl.obolibrary.org/obo/PLANA_0002100 PLANA LOOM
http://purl.obolibrary.org/obo/PLANA_0002100 PLANP LOOM
http://bmkeg.isi.edu/neuDIGs#Synapse NEUDIGS LOOM