Preferred Name |
Genotype |
|
Synonyms |
|
|
Definitions |
The genotype is the genetic information captured in a particular genome. It can also refer to one or more populations, if statistical distributions are provided that assign genetic codes to groups of individuals. A genotype is denoted by a string of slash-separated list of alleles ("has value" property). The length of the list is dependent on the ploidy of the studied species as well as sequencing technique used. Example: "A/G" denotes a genotype with alleles "A" and "G". Encodes for the "Genotype" attribute in GVF and "GT" additional information in VCF. |
|
ID |
https://www.codamono.com/biointerchange/gfvo#Genotype |
|
comment |
The genotype is the genetic information captured in a particular genome. It can also refer to one or more populations, if statistical distributions are provided that assign genetic codes to groups of individuals. A genotype is denoted by a string of slash-separated list of alleles ("has value" property). The length of the list is dependent on the ploidy of the studied species as well as sequencing technique used. Example: "A/G" denotes a genotype with alleles "A" and "G". Encodes for the "Genotype" attribute in GVF and "GT" additional information in VCF. |
|
isDefinedBy |
http://www.1000genomes.org/wiki/Analysis/Variant%20Call%20Format/vcf-variant-call-format-version-41 http://samtools.github.io/hts-specs/VCFv4.2.pdf |
|
label |
Genotype |
|
prefixIRI |
Genotype |
|
prefLabel |
Genotype |
|
seeAlso | ||
subClassOf |
https://www.codamono.com/biointerchange/gfvo#FunctionalSpecification |