Experimental Factor Ontology

Last uploaded: November 18, 2024
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Preferred Name

hippocampal formation
Synonyms

hippocampus

major hippocampus

archipallium

formatio hippocampi

primal cortex

seahorse

hippocampus (Crosby)
Definitions

Hippocampus (proper) plus dentate gyrus and subiculum[definition derived from NIF comments and ontology alignment].
ID

http://purl.obolibrary.org/obo/UBERON_0002421
curator note

The term hippocampus is often used synonymously with hippocampal formation which consists of the hippocampus proper or Cornu Ammonis, the dentate gyrus and the subiculum
database_cross_reference

UMLS:C0175202

BIRNLEX:715

Wikipedia:Hippocampal_formation

neuronames:177

EMAPA:35405

BTO:0000601

SCTID:422867004

BAMS:HPF

BAMS:Hi

BAMS:HiF

BM:Tel-HF

DHBA:10294

FMA:74038

HBA:4249

MA:0000189

MBA:1089

PBA:4003
definition

Hippocampus (proper) plus dentate gyrus and subiculum[definition derived from NIF comments and ontology alignment].
depiction

https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.4/assets/3d-allen-m-brain.glb

https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.4/assets/3d-allen-f-brain.glb
external_ontology_notes

BTO:0000601 is placed here since it includes the DG. GO also includes dentate gyrus development as part of hippocampus development, so we assume when GO says 'hippocampus' it means 'hippocampal formation'. In ABA HPF = (.. subiculum) + HIP, HIP = DG + AH.
has_exact_synonym

hippocampus (Crosby)
has_narrow_synonym

hippocampus
has_obo_namespace

uberon
has_related_synonym

major hippocampus

archipallium

formatio hippocampi

primal cortex

seahorse
id

UBERON:0002421
in_subset

http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas

http://purl.obolibrary.org/obo/uberon/core#pheno_slim

http://purl.obolibrary.org/obo/uberon/core#uberon_slim
label

hippocampal formation
notation

UBERON:0002421
part_of

http://purl.obolibrary.org/obo/UBERON_0000203

http://purl.obolibrary.org/obo/UBERON_0001016

http://purl.obolibrary.org/obo/UBERON_0000955

http://purl.obolibrary.org/obo/UBERON_0000956
preferred label

hippocampal formation
prefLabel

hippocampal formation
RO_0002171

http://purl.obolibrary.org/obo/UBERON_0002264
RO_0002175

http://purl.obolibrary.org/obo/NCBITaxon_9606
treeView

http://purl.obolibrary.org/obo/UBERON_0000203

http://purl.obolibrary.org/obo/UBERON_0001016

http://purl.obolibrary.org/obo/UBERON_0000955

http://purl.obolibrary.org/obo/UBERON_0000956
subClassOf

http://purl.obolibrary.org/obo/UBERON_0000061
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Delete Mapping To Ontology Source
http://purl.obolibrary.org/obo/UBERON_0002421 CL SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002421 NPOKB SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002421 UBERON SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002421 CCONT SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002421 PCL SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002421 GO-PLUS SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002421 BERO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002421 HHEAR SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002421 HRA SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002421 UPHENO SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002421 NIFSTD SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002421 FNS-H SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002421 OBA SAME_URI
http://purl.obolibrary.org/obo/UBERON_0002421 CL LOOM
http://localhost/plosthes.2017-1#709 PLOSTHES LOOM
http://www.semanticweb.org/ontologies/2009/9/Ontology1255357986125.owl#Hippocampal_formation BRCT LOOM
http://purl.obolibrary.org/obo/EMAPA_35405 EMAPA LOOM
http://purl.jp/bio/4/id/201106087405611158 IOBC LOOM
http://api.brain-map.org/api/v2/data/Structure/1089 NPOKB LOOM
http://api.brain-map.org/api/v2/data/Structure/1089 NIFSTD LOOM
http://www.radlex.org/RID/RID20424 RADLEX LOOM
http://radlex.org/RID/RID20424 RADLEX LOOM
http://cocomac.g-node.org/services/custom_sql_query.php?sql=SELECT%20*%20from%20BrainMaps_BrainSiteAcronyms%20where%20ID=112 NIFSTD LOOM
http://www.case.edu/EpSO.owl#HippocampalFormation MEPO LOOM
http://cocomac.g-node.org/services/custom_sql_query.php?sql=SELECT%20*%20from%20BrainMaps_BrainSiteAcronyms%20where%20ID=1281 NIFSTD LOOM
http://purl.obolibrary.org/obo/UBERON_0002421 NPOKB LOOM
http://purl.obolibrary.org/obo/UBERON_0002421 UBERON LOOM
http://purl.obolibrary.org/obo/UBERON_0002421 CCONT LOOM
http://purl.obolibrary.org/obo/UBERON_0002421 PCL LOOM
http://purl.obolibrary.org/obo/UBERON_0002421 GO-PLUS LOOM
http://purl.obolibrary.org/obo/UBERON_0002421 HHEAR LOOM
http://purl.obolibrary.org/obo/UBERON_0002421 HRA LOOM
http://purl.obolibrary.org/obo/UBERON_0002421 UPHENO LOOM
http://purl.obolibrary.org/obo/UBERON_0002421 NIFSTD LOOM
http://purl.obolibrary.org/obo/UBERON_0002421 FNS-H LOOM
http://purl.obolibrary.org/obo/UBERON_0002421 OBA LOOM
http://www.case.edu/EpilepsyOntology.owl#HippocampalFormation EPSO LOOM
http://doe-generated-ontology.com/OntoAD#C0175202 ONTOAD LOOM
http://purl.org/obo/owlapi/fma#FMA_74038 BIOMODELS LOOM
http://purl.obolibrary.org/obo/MA_0000189 MA LOOM
http://mouse.brain-map.org/atlas/index.html#HPF ABA-AMB LOOM
http://purl.org/sig/ont/fma/fma74038 FMA LOOM
http://uri.neuinfo.org/nif/nifstd/birnlex_715 NIFSTD LOOM
http://bioontology.org/projects/ontologies/birnlex#birnlex_715 BIRNLEX LOOM