Experimental Factor Ontology

Last uploaded: December 16, 2024
Preferred Name

cytarabine
Synonyms

Cytosine-1-beta-D-arabinofuranoside

1-beta-D-Arabinofuranosylcytosine

Arabinoside C

cytosine-beta-D-arabinofuranoside

4-Amino-1-beta-D-arabinofuranosyl-2(1H)-pyrimidinone

arabinocytosine

Cytosine arabinoside

cytarabinum

ara-C

citarabina

cytarabine

4-amino-1-beta-D-arabinofuranosylpyrimidin-2(1H)-one

Cytarabine

Definitions

A pyrimidine nucleoside in which cytosine is attached to D-arabinofuranose via a beta-N(1)-glycosidic bond. Used mainly in the treatment of leukaemia, especially acute non-lymphoblastic leukaemia, cytarabine is an antimetabolite antineoplastic agent that inhibits the synthesis of DNA. It also has antiviral and immunosuppressant properties.

ID

http://purl.obolibrary.org/obo/CHEBI_28680

charge

0

database_cross_reference

Wikipedia:Cytarabine

PMID:15492802

KEGG:C02961

LINCS:LSM-5470

CAS:147-94-4

SNOMEDCT:89265009

Drug_Central:770

DrugBank:DB00987

HMDB:HMDB0015122

SNOMEDCT:387511003

KEGG:D00168

Reaxys:89175

MeSH:D003561

PDBeChem:AR3

NCIt:C408

definition

A pyrimidine nucleoside in which cytosine is attached to D-arabinofuranose via a beta-N(1)-glycosidic bond. Used mainly in the treatment of leukaemia, especially acute non-lymphoblastic leukaemia, cytarabine is an antimetabolite antineoplastic agent that inhibits the synthesis of DNA. It also has antiviral and immunosuppressant properties.

formula

C9H13N3O5

has characteristic

http://www.ebi.ac.uk/efo/EFO_0001899

has_alternative_id

CHEBI:23532

CHEBI:40824

CHEBI:4074

has_exact_synonym

4-amino-1-beta-D-arabinofuranosylpyrimidin-2(1H)-one

Cytarabine

has_obo_namespace

chebi_ontology

has_related_synonym

Cytosine-1-beta-D-arabinofuranoside

1-beta-D-Arabinofuranosylcytosine

Arabinoside C

cytosine-beta-D-arabinofuranoside

4-Amino-1-beta-D-arabinofuranosyl-2(1H)-pyrimidinone

arabinocytosine

Cytosine arabinoside

cytarabinum

ara-C

citarabina

cytarabine

has_role

http://www.ebi.ac.uk/efo/EFO_0001899

id

CHEBI:28680

in_subset

http://purl.obolibrary.org/obo/chebi#3_STAR

inchi

InChI=1S/C9H13N3O5/c10-5-1-2-12(9(16)11-5)8-7(15)6(14)4(3-13)17-8/h1-2,4,6-8,13-15H,3H2,(H2,10,11,16)/t4-,6-,7+,8-/m1/s1

inchikey

UHDGCWIWMRVCDJ-CCXZUQQUSA-N

label

cytarabine

mass

243.21674

monoisotopicmass

243.08552

notation

CHEBI:28680

preferred label

cytarabine

prefLabel

cytarabine

smiles

Nc1ccn([C@@H]2O[C@H](CO)[C@@H](O)[C@@H]2O)c(=O)n1

subClassOf

http://purl.obolibrary.org/obo/CHEBI_24532

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Mapping To Ontology Source
http://purl.obolibrary.org/obo/CHEBI_28680 DRON SAME_URI
http://purl.obolibrary.org/obo/CHEBI_28680 PDRO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_28680 CCONT SAME_URI
http://purl.obolibrary.org/obo/CHEBI_28680 HOIP SAME_URI
http://purl.obolibrary.org/obo/CHEBI_28680 DINTO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_28680 CHEBI SAME_URI
http://purl.obolibrary.org/obo/CHEBI_28680 GO-PLUS SAME_URI
http://purl.obolibrary.org/obo/CHEBI_28680 BERO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_28680 DDSS SAME_URI
http://purl.obolibrary.org/obo/CHEBI_28680 TXPO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_28680 BIOMODELS SAME_URI
http://purl.obolibrary.org/obo/CHEBI_28680 NIFSTD SAME_URI
http://purl.obolibrary.org/obo/CHEBI_28680 ECTO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_28680 OBA SAME_URI
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C408 NCIT LOOM
http://purl.obolibrary.org/obo/NCIT_C408 BERO LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D13.570.065.300 RH-MESH LOOM
http://www.phoc.org.cn/pmo/class/PMO_00018383 PMAPP-PMO LOOM
http://purl.obolibrary.org/obo/OMIT_0004847 OMIT LOOM
http://stirdf.jst.go.jp/id/200907086890392751 IOBC LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D13.570.685.245.453 RH-MESH LOOM
http://purl.bioontology.org/ontology/LNC/MTHU059480 LOINC LOOM
http://purl.bioontology.org/ontology/PDQ/CDR0000039015 PDQ LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#3565 OCHV LOOM
http://purl.bioontology.org/ontology/SNOMEDCT/387511003 SNOMEDCT LOOM
http://purl.jp/bio/4/id/200906077177645175 IOBC LOOM
http://purl.obolibrary.org/obo/MESH_D003561 BERO LOOM
http://purl.bioontology.org/ontology/SNMI/C-78080 SNMI LOOM
http://purl.bioontology.org/ontology/NDDF/002649 NDDF LOOM
http://purl.obolibrary.org/obo/CHEBI_28680 DRON LOOM
http://purl.obolibrary.org/obo/CHEBI_28680 PDRO LOOM
http://purl.obolibrary.org/obo/CHEBI_28680 CCONT LOOM
http://purl.obolibrary.org/obo/CHEBI_28680 HOIP LOOM
http://purl.obolibrary.org/obo/CHEBI_28680 DINTO LOOM
http://purl.obolibrary.org/obo/CHEBI_28680 CHEBI LOOM
http://purl.obolibrary.org/obo/CHEBI_28680 GO-PLUS LOOM
http://purl.obolibrary.org/obo/CHEBI_28680 BERO LOOM
http://purl.obolibrary.org/obo/CHEBI_28680 DDSS LOOM
http://purl.obolibrary.org/obo/CHEBI_28680 TXPO LOOM
http://purl.obolibrary.org/obo/CHEBI_28680 BIOMODELS LOOM
http://purl.obolibrary.org/obo/CHEBI_28680 NIFSTD LOOM
http://purl.obolibrary.org/obo/CHEBI_28680 ECTO LOOM
http://purl.obolibrary.org/obo/CHEBI_28680 OBA LOOM
http://evs.nci.nih.gov/ftp1/NDF-RT/NDF-RT.owl#N0000146419 ODAE LOOM
http://purl.bioontology.org/ontology/RXNORM/3041 RXNORM LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D003561 RH-MESH LOOM
http://purl.bioontology.org/ontology/LNC/LP70367-5 LOINC LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D03.383.742.680.245.453 RH-MESH LOOM
http://purl.bioontology.org/ontology/VANDF/4018080 VANDF LOOM
http://purl.bioontology.org/ontology/MESH/D003561 MESH LOOM
http://www.co-ode.org/ontologies/galen#Cytarabine GALEN LOOM
https://go.drugbank.com/drugs/DB00987 MDM LOOM
http://purl.bioontology.org/ontology/ATC/L01BC01 ATC LOOM
http://www.drugbank.ca/drugs/DB00987 FTC LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0010711 OCHV LOOM
http://purl.bioontology.org/ontology/RCD/h31.. RCD LOOM
http://purl.bioontology.org/ontology/NDFRT/N0000146419 NDFRT LOOM