Combined Phenotype Ontology

Last uploaded: November 18, 2021
Preferred Name

pyridoxamine

Synonyms

Pyridoxamine

4-(aminomethyl)-5-(hydroxymethyl)-2-methylpyridin-3-ol

4-(AMINOMETHYL)-5-(HYDROXYMETHYL)-2-METHYLPYRIDIN-3-OL

PM

Definitions

A monohydroxypyridine that is pyridine substituted by a hydroxy group at position 3, an aminomethyl group at position 4, a hydroxymethyl group at position 5 and a methyl group at position 2. The 4-aminomethyl form of vitamin B6, it is used (in the form of the hydrochloride salt) for treatment of diabetic nephropathy.

ID

http://purl.obolibrary.org/obo/CHEBI_16410

charge

0

database_cross_reference

PMID:7710125

PMID:2580028

Gmelin:774473

FooDB:FDB021819

KNApSAcK:C00007504

PMID:19212411

PMID:23841818

PMID:15369738

Chemspider:1023

PMID:1400785

CAS:85-87-0

PMID:33665688

PDBeChem:PXM

PMID:23504149

MetaCyc:PYRIDOXAMINE

Reaxys:6993

Wikipedia:Pyridoxamine

PMID:33535220

HMDB:HMDB0001431

KEGG:C00534

PMID:8054960

PMID:24094054

Beilstein:6993

PMID:18434162

definition

A monohydroxypyridine that is pyridine substituted by a hydroxy group at position 3, an aminomethyl group at position 4, a hydroxymethyl group at position 5 and a methyl group at position 2. The 4-aminomethyl form of vitamin B6, it is used (in the form of the hydrochloride salt) for treatment of diabetic nephropathy.

formula

C8H12N2O2

has exact synonym

Pyridoxamine

4-(aminomethyl)-5-(hydroxymethyl)-2-methylpyridin-3-ol

has related synonym

4-(AMINOMETHYL)-5-(HYDROXYMETHYL)-2-METHYLPYRIDIN-3-OL

PM

has role

http://purl.obolibrary.org/obo/CHEBI_76924

http://purl.obolibrary.org/obo/CHEBI_38157

http://purl.obolibrary.org/obo/CHEBI_75772

http://purl.obolibrary.org/obo/CHEBI_77746

http://purl.obolibrary.org/obo/CHEBI_76595

http://purl.obolibrary.org/obo/CHEBI_75771

http://purl.obolibrary.org/obo/CHEBI_76971

has_alternative_id

CHEBI:26426

CHEBI:45228

CHEBI:14978

CHEBI:8669

has_obo_namespace

chebi_ontology

id

CHEBI:16410

in_subset

http://purl.obolibrary.org/obo/chebi#3_STAR

inchi

InChI=1S/C8H12N2O2/c1-5-8(12)7(2-9)6(4-11)3-10-5/h3,11-12H,2,4,9H2,1H3

inchikey

NHZMQXZHNVQTQA-UHFFFAOYSA-N

is conjugate base of

http://purl.obolibrary.org/obo/CHEBI_57761

label

pyridoxamine

mass

168.19316

monoisotopicmass

168.08988

notation

CHEBI:16410

prefLabel

pyridoxamine

smiles

Cc1ncc(CO)c(CN)c1O

subClassOf

http://purl.obolibrary.org/obo/CHEBI_27306

http://purl.obolibrary.org/obo/CHEBI_38182

http://purl.obolibrary.org/obo/CHEBI_38198

http://purl.obolibrary.org/obo/CHEBI_38196

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Delete Mapping To Ontology Source
http://purl.obolibrary.org/obo/CHEBI_16410 CHEBI SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16410 GO-PLUS SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16410 FYPO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16410 GO-PLUS SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16410 BERO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16410 BIOMODELS SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16410 ONSTR SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16410 HINO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16410 ZP SAME_URI
http://purl.obolibrary.org/obo/CHEBI_16410 FYPO LOOM
http://purl.obolibrary.org/obo/CHEBI_16410 CHEBI LOOM
http://purl.obolibrary.org/obo/CHEBI_16410 GO-PLUS LOOM
http://www.phoc.org.cn/pmo/class/PMO_00018348 PMAPP-PMO LOOM
http://purl.bioontology.org/ontology/SNOMEDCT/430632000 SNOMEDCT LOOM
http://id.nlm.nih.gov/mesh/D011733 MDM LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D03.383.725.676.925.750 RH-MESH LOOM
http://purl.jp/bio/10/gmo/GMO_001751 GMO LOOM
http://purl.bioontology.org/ontology/MESH/D011733 MESH LOOM
http://purl.obolibrary.org/obo/OMIT_0012670 OMIT LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D011733 RH-MESH LOOM
http://purl.obolibrary.org/obo/UPa_UPC00534 UPA LOOM
https://go.drugbank.com/drugs/DB11673 MDM LOOM
http://stirdf.jst.go.jp/id/200907058391373238 IOBC LOOM
http://purl.obolibrary.org/obo/CHEBI_16410 GO-PLUS LOOM
http://purl.obolibrary.org/obo/CHEBI_16410 BERO LOOM
http://purl.obolibrary.org/obo/CHEBI_16410 BIOMODELS LOOM
http://purl.obolibrary.org/obo/CHEBI_16410 ONSTR LOOM
http://purl.obolibrary.org/obo/CHEBI_16410 HINO LOOM
http://purl.obolibrary.org/obo/CHEBI_16410 ZP LOOM
http://purl.obolibrary.org/obo/MESH_D011733 BERO LOOM
http://purl.jp/bio/4/id/200906072578877816 IOBC LOOM