Ontology of Genes and Genomes

Last uploaded: December 2, 2016
Preferred Name

HMGB1
Synonyms

SBP-1

HMG3

HMG1

Definitions

Other designations: Amphoterin|HMG-1|Sulfoglucuronyl carbohydrate binding protein|high mobility group protein 1|high mobility group protein B1|high-mobility group (nonhistone chromosomal) protein 1|high-mobility group box 1

ID

http://purl.obolibrary.org/obo/OGG_3000003146

comment

Other designations: Amphoterin|HMG-1|Sulfoglucuronyl carbohydrate binding protein|high mobility group protein 1|high mobility group protein B1|high-mobility group (nonhistone chromosomal) protein 1|high-mobility group box 1

description

high mobility group box 1

alternative term

SBP-1

HMG3

HMG1

chromosome ID of gene

13

database_cross_reference

Ensembl:ENSG00000189403

HPRD:01228

HGNC:4983

Vega:OTTHUMG00000016670

MIM:163905

definition source

WEB: http://www.ncbi.nlm.nih.gov/gene

full name from nomenclature authority

high mobility group box 1

gene map location

13q12

has GO association

GO_0000122 (EC: IMP, PMID: 19158276); GO_0000793 (EC: IDA, PMID: 12925773); GO_0001773 (EC: ISS); GO_0002407 (EC: ISS); GO_0002437 (EC: IEP, PMID: 19841752); GO_0003684 (EC: ISS); GO_0003690 (EC: ISS); GO_0003697 (EC: ISS); GO_0003700 (EC: IDA, PMID: 19223331); GO_0005125 (EC: ISS); GO_0005515 (EC: IPI, PMID: 11748232); GO_0005576 (EC: TAS); GO_0005615 (EC: IDA, PMID: 19841752); GO_0005634 (EC: IDA, PMID: 19223331); GO_0005654 (EC: TAS); GO_0006265 (EC: ISS); GO_0006288 (EC: IDA, PMID: 9600082); GO_0006309 (EC: TAS); GO_0006310 (EC: ISS); GO_0006357 (EC: IDA, PMID: 11748232); GO_0006915 (EC: TAS); GO_0006921 (EC: TAS); GO_0008134 (EC: IPI, PMID: 19223331); GO_0008301 (EC: IMP, PMID: 19223331); GO_0008301 (EC: ISS); GO_0009986 (EC: IDA, PMID: 19841752); GO_0017053 (EC: IDA, Qualifier: colocalizes_with, PMID: 19158276); GO_0017055 (EC: IDA, PMID: 8006019); GO_0031175 (EC: ISS); GO_0033151 (EC: IDA, PMID: 9166431); GO_0042056 (EC: ISS); GO_0043065 (EC: IDA, PMID: 19800306); GO_0043280 (EC: IDA, PMID: 19800306); GO_0043388 (EC: IDA, PMID: 11748232); GO_0044822 (EC: IDA); GO_0045087 (EC: TAS); GO_0045944 (EC: IDA, PMID: 19223331); GO_0050786 (EC: ISS); GO_0050918 (EC: ISS); GO_0051103 (EC: ISS); GO_0070491 (EC: IPI, PMID: 19223331); GO_2000426 (EC: IEA)

has PubMed association

PMID: 1909331; 2013279; 2922262; 3697355; 8006019; 8339930; 8366113; 8661151; 8890171; 9036861; 9150946; 9166431; 9472015; 9507007; 9600082; 9628821; 9671457; 9722660; 9812979; 9880542; 10490593; 10531386; 10617144; 10652254; 10962007; 11099378; 11106654; 11246022; 11279268; 11294645; 11299752; 11470162; 11748221; 11748232; 12062430; 12110890; 12149489; 12231511; 12384917; 12456506; 12477932; 12488489; 12517784; 12534345; 12565837; 12591939; 12604365; 12620891; 12665595; 12727838; 12759333; 12785009; 12799451; 12925773; 12935895; 14517071; 14532127; 14534709; 14702039; 14739282; 14999020; 15005629; 15014079; 15130941; 15146429; 15162419; 15201494; 15210788; 15488733; 15489334; 15496585; 15666359; 15733057; 15743787; 15766246; 15793304; 15802534; 15877951; 15915542; 15924431; 15944249; 15994314; 16040616; 16130169; 16169070; 16267105; 16282196; 16570276; 16697213; 16751357; 16802368; 16807371; 16855214; 16916647; 16951227; 16962095; 16966386; 16968820; 16997859; 16997939; 17035340; 17060403; 17142771; 17203009; 17218606; 17346334; 17403666; 17475879; 17502242; 17504981; 17597834; 17610420; 17617154; 17678959; 17895302; 17918013; 17936030; 17958791; 17975708; 17991152; 18029348; 18073062; 18076993; 18160415; 18239618; 18239742; 18250463; 18277058; 18288272; 18294942; 18317568; 18346273; 18354232; 18425372; 18431589; 18441281; 18569640; 18577209; 18599803; 18631454; 18644848; 18655026; 18670905; 18680137; 18682735; 18692049; 18707018; 18715162; 18720262; 18759291; 18768881; 18788635; 18799030; 18822317; 18825489; 18825712; 18846108; 18850631; 18854154; 18949384; 18952078; 18974890; 18984601; 18996119; 19005067; 19009026; 19044016; 19087540; 19139725; 19148477; 19150066; 19151394; 19158276; 19197071; 19201506; 19214652; 19223331; 19247800; 19387923; 19398086; 19417608; 19445369; 19446504; 19451748; 19471022; 19476625; 19505873; 19515846; 19530996; 19533845; 19545550; 19564572; 19571604; 19572890; 19616266; 19639200; 19666121; 19679874; 19726280; 19738201; 19751520; 19777384; 19786934; 19800306; 19811284; 19819342; 19837864; 19841752; 19876719; 19887013; 19930620; 19933377; 19948257; 19962765; 20007974; 20044610; 20110525; 20123074; 20123075; 20123076; 20185963; 20193282; 20195357; 20200191; 20207250; 20231695; 20302902; 20350435; 20360068; 20414834; 20419158; 20430742; 20510002; 20579387; 20622903; 20659154; 20723409; 20799933; 20812762; 20826760; 20844833; 20846416; 20927132; 20936104; 20959471; 20980161; 21042739; 21044333; 21044950; 21052685; 21092200; 21093407; 21099216; 21116278; 21120500; 21139048; 21146549; 21151833; 21163940; 21181308; 21198433; 21211520; 21241404; 21283827; 21303685; 21319273; 21365018; 21366949; 21380479; 21395369; 21435605; 21442152; 21443191; 21457762; 21457800; 21520052; 21532866; 21548924; 21617575; 21617715; 21642542; 21650061; 21656024; 21691146; 21743489; 21752923; 21788990; 21825870; 21860212; 21864037; 21871094; 21890473; 21900206; 21906983; 21914366; 21915243; 21926646; 21940680; 21944254; 21944908; 21947243; 21953322; 21957148; 21958433; 21963094; 21968272; 21989210; 21990362; 22012330; 22020142; 22025513; 22047946; 22102692; 22105604; 22108005; 22110531; 22127462; 22127490; 22189477; 22189943; 22231645; 22237993; 22248244; 22265157; 22275109; 22293756; 22306257; 22331597; 22333024; 22345153; 22348591; 22361176; 22369934; 22370717; 22379092; 22391561; 22394598; 22473704; 22484401; 22496788; 22505724; 22521432; 22544356; 22549180; 22549347; 22552293; 22578261; 22609241; 22623428; 22644337; 22672360; 22696656; 22703527; 22747650; 22750245; 22780932; 22782142; 22842346; 22862965; 22883976; 22884669; 22909167; 22922889; 22928592; 22931605; 22932142; 22939629; 22960399; 22983919; 23000965; 23023232; 23042506; 23055574; 23063560; 23070967; 23118492; 23122444; 23143556; 23157129; 23175347; 23194089; 23204053; 23207101; 23213216; 23228930; 23231044; 23244202; 23255728; 23260004; 23269659; 23269975; 23284878; 23288170; 23317219; 23318458; 23325855; 23328212; 23339448; 23359306; 23384711; 23414695; 23440398; 23447529; 23467607; 23485600; 23549344; 23602568; 23616573; 23628898; 23649808; 23685846; 23691208; 23711070; 23723299; 23727604; 23729200; 23866030; 23883808; 23911608; 23954397; 23964150; 23974442; 24082908; 24133029; 24152844; 24188108; 24200063; 24257755; 24302768

label

HMGB1

modification date

20140408

NCBI GeneID

3146

NCBI LocusTag

RP11-550P23.1

nomenclature status

Official from a nomenclature committee

organism NCBITaxon ID

9606

prefixIRI

OGG:3000003146

prefLabel

HMGB1

symbol from nomenclature authority

HMGB1

term editor

Bin Zhao, Yue Liu, Oliver He

subClassOf

http://purl.obolibrary.org/obo/OGG_2060009606

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