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National Center for Biotechnology Information (NCBI) Organismal Classification
Last uploaded:
January 16, 2025
Acronym | NCBITAXON |
Visibility | Public |
Description | The NCBI Taxonomy Database is a curated classification and nomenclature for all of the organisms in the public sequence databases. |
Status | Production |
Format | UMLS |
Contact | NCBI information, info@ncbi.nlm.nih.gov |
Categories | Taxonomic Classification |
Groups | OBO Foundry, Unified Medical Language System |
License Information | This ontology is made available via the UMLS. Users of all UMLS ontologies must abide by the terms of the UMLS license. |
Version | Released | Uploaded | Downloads |
---|---|---|---|
NCBI2024_04_02 (Parsed, Indexed, Metrics, Annotator, Error Diff) | 11/04/2024 | 01/16/2025 | RDF/TTL | CSV | Diff |
2024AA (Archived) | 05/06/2024 | 08/28/2024 | RDF/TTL | Diff |
2023AB (Archived) | 11/06/2023 | 01/31/2024 | RDF/TTL | Diff |
2023AA (Archived) | 04/01/2023 | 08/07/2023 | RDF/TTL | Diff |
2022AB (Archived) | 11/07/2022 | 01/06/2023 | RDF/TTL | Diff |
2022AA (Archived) | 05/02/2022 | 06/15/2022 | RDF/TTL | Diff |
2021AB (Archived) | 11/01/2021 | 12/06/2021 | RDF/TTL |
2021AA (Archived) | 04/03/2021 | 12/06/2021 | RDF/TTL |
2020AB (Archived) | 11/02/2020 | 01/06/2021 | RDF/TTL |
2020AA (Archived) | 05/04/2018 | 09/24/2020 | RDF/TTL |
2019AB (Archived) | 11/04/2019 | 11/18/2019 | RDF/TTL |
2019AA (Archived) | 05/06/2019 | 08/27/2019 | RDF/TTL |
2018AB (Archived) | 11/05/2018 | 04/29/2019 | RDF/TTL |
2018AA (Archived) | 05/07/2018 | 07/06/2018 | RDF/TTL |
2017AB (Archived) | 11/06/2017 | 07/06/2018 | RDF/TTL |
2017AA (Archived) | 05/08/2017 | 04/06/2018 | RDF/TTL |
2016AB (Archived) | 02/06/2017 | 02/06/2017 | RDF/TTL |
2016AA (Archived) | 09/06/2016 | 09/06/2016 | RDF/TTL |
2015AB (Archived) | 07/20/2016 | 07/20/2016 | RDF/TTL |
2015AA (Archived) | 06/09/2015 | 06/09/2015 | RDF/TTL |
2015AA (Archived) | 06/09/2015 | 06/09/2015 | RDF/TTL |
2014AB (Archived) | 01/29/2015 | 01/29/2015 | RDF/TTL |
2014AA (Archived) | 01/01/2014 | 08/28/2014 | RDF/TTL |
1.2 (Archived) | 12/12/2011 | 07/11/2012 | OWL |
1.2 (Archived) | 10/27/2008 | 05/13/2009 | OBO |
more... |
- NeuroMorpho.Org Species Ontology v.1.0.0
- A lighter version of the NCBI taxonomy that is customized for the NeuroMorpho.Org species.
- NeuroMorpho.Org Species Ontology v.1.2.2
- A lighter version of the NCBI taxonomy that is customized for the NeuroMorpho.Org species. The ontology also include NIFSTD, Rat strain and Jax mice terms that are arranged in a single parent hierarchical tree.
Classes | 736,927 |
Individuals | 0 |
Properties | 4 |
Maximum depth | 37 |
Maximum number of children | 1,569 |
Average number of children | 5 |
Classes with a single child | 66,887 |
Classes with more than 25 children | 4,722 |
Classes with no definition | 736,927 |
Jump to:
Id | http://purl.bioontology.org/ontology/NCBITAXON/487
http://purl.bioontology.org/ontology/NCBITAXON/487
|
---|---|
Preferred Name | Neisseria meningitidis |
Synonyms |
Micrococcus intracellularis
Neisseria weichselbaumii
Micrococcus meningitidis
Diplokokkus intracellularis meningitidis
Micrococcus meningitidis cerebrospinalis
|
Type | http://www.w3.org/2002/07/owl#Class |
All Properties
altLabel |
Micrococcus intracellularis
Neisseria weichselbaumii
Micrococcus meningitidis
Diplokokkus intracellularis meningitidis
Micrococcus meningitidis cerebrospinalis
|
---|---|
prefLabel |
Neisseria meningitidis
|
notation |
487
|
DIV |
Bacteria
|
subClassOf | |
Semantic type UMLS property | |
RANK |
species
|
type | |
Authority name |
"Micrococcus intracellularis" (Jaeger) Migula 1900
"Diplokokkus intracellularis meningitidis" (sic) Weichselbaum 1887
Neisseria meningitidis (Albrecht and Ghon 1901) Murray 1929
"Micrococcus meningitidis cerebrospinalis" Albrecht and Ghon 1901
"Micrococcus meningitidis" Albrecht and Ghon 1903
"Neisseria weichselbaumii" Trevisan 1889
See more
See less
|
tui |
T007
|
cui |
C0027575
|
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- Problem retrieving properties:
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Add NCBO Web Widgets to your site for NCBITAXON
Widget type | Widget demonstration |
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Step 2: Follow the Instructions
For more help visit NCBO Widget Wiki |
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Example 1 (start typing the class name to get its full URI)
Example 2 (get the ID for a class) Example 3 (get the preferred name for a class) Step 2: Follow the Instructions
For more help visit NCBO Widget Wiki |
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Step 2: Follow the InstructionsCopy the code below and paste it to your HTML page <iframe frameborder="0" src="/widgets/visualization?ontology=NCBITAXON&class=http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FNCBITAXON%2F2845750&apikey=YOUR_API_KEY"></iframe> For more help visit NCBO Widget Wiki |
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Step 2: Follow the InstructionsCopy the code below and paste it to your HTML page <link rel="stylesheet" type="text/css" href="/widgets/jquery.ncbo.tree.css"> <script src="/widgets/jquery.ncbo.tree-2.0.2.js"></script> <div id="widget_tree"></div> var widget_tree = $("#widget_tree").NCBOTree({ apikey: "YOUR_API_KEY", ontology: "NCBITAXON" }); You can also view a detailed demonstration For more help visit NCBO Widget Wiki |