Kidney Tissue Atlas Ontology

Last uploaded: March 16, 2024

Preferred Name	CD247
Synonyms	TCRZ T3Z CD3Q CD3Z CD3H CD3-ZETA
Definitions	Other designations: CD247 antigen, zeta subunit\|CD3Z antigen, zeta polypeptide (TiT3 complex)\|CD3zeta chain\|T-cell antigen receptor complex, zeta subunit of CD3\|T-cell receptor T3 zeta chain\|T-cell surface glycoprotein CD3 zeta chain\|TCR zeta chain
ID	http://purl.obolibrary.org/obo/OGG_3000000919
comment	Other designations: CD247 antigen, zeta subunit\|CD3Z antigen, zeta polypeptide (TiT3 complex)\|CD3zeta chain\|T-cell antigen receptor complex, zeta subunit of CD3\|T-cell receptor T3 zeta chain\|T-cell surface glycoprotein CD3 zeta chain\|TCR zeta chain
Description	CD247 molecule
alternative term	TCRZ T3Z CD3Q CD3Z CD3H CD3-ZETA
chromosome ID of gene	1
database_cross_reference	HPRD:01729 MIM:186780 Vega:OTTHUMG00000034593 HGNC:1677 Ensembl:ENSG00000198821
definition source	WEB: http://www.ncbi.nlm.nih.gov/gene
full name from nomenclature authority	CD247 molecule
gene map location	1q24.2
has GO association	GO_0004888 (EC: IEA); GO_0005515 (EC: IPI, PMID: 10704231); GO_0005737 (EC: IDA, PMID: 11390434); GO_0005886 (EC: IDA, PMID: 11390434); GO_0005886 (EC: TAS); GO_0016021 (EC: IEA); GO_0016032 (EC: TAS); GO_0031295 (EC: TAS); GO_0038096 (EC: TAS); GO_0042101 (EC: IDA, PMID: 8176201); GO_0042105 (EC: IEA); GO_0042802 (EC: IPI, PMID: 17055436); GO_0042803 (EC: NAS, PMID: 12110186); GO_0045087 (EC: TAS); GO_0050690 (EC: TAS); GO_0050776 (EC: TAS); GO_0050852 (EC: TAS)
has PubMed association	PMID: 1385158; 1385321; 1390434; 1454062; 1530920; 1532817; 1717577; 2111780; 2138083; 2138330; 2145165; 2845582; 2974162; 3478717; 3785426; 7514106; 7517794; 7526385; 7528772; 7589084; 7629168; 7680960; 7737297; 7842742; 8125298; 8176201; 8366117; 8409430; 8417118; 8621646; 8626561; 8656061; 8675217; 8760790; 8809126; 8906806; 8977276; 9036949; 9045614; 9047237; 9172452; 9368621; 9448136; 9484780; 9485181; 9510190; 9575182; 9625766; 9677202; 9687533; 9743208; 9880255; 10224289; 10424441; 10449770; 10704231; 10722370; 10799879; 11048639; 11349123; 11353765; 11390434; 11463741; 11525746; 11572860; 11714771; 11827988; 11851345; 11891219; 11916964; 11920499; 11950832; 12100036; 12110186; 12165490; 12176041; 12202152; 12356870; 12420108; 12421992; 12477932; 12522270; 12587826; 12731048; 12734410; 12755691; 12847689; 12902492; 12928398; 14523017; 14526327; 14550268; 14672952; 14715568; 14757743; 14967045; 15084271; 15144186; 15186530; 15274412; 15323357; 15489334; 15489916; 15592455; 15641485; 15659558; 15743765; 15749888; 15879101; 15922712; 16049493; 16094384; 16337488; 16393980; 16454711; 16461343; 16616055; 16672702; 16710414; 17001685; 17054067; 17055436; 17134238; 17134755; 17176095; 17255353; 17464179; 17652306; 17951997; 17997796; 18051367; 18174230; 18178846; 18207249; 18215426; 18438604; 18463433; 18505733; 18714041; 18721908; 18787188; 19064610; 19082633; 19090773; 19201859; 19229850; 19259799; 19422667; 19536175; 19664385; 19710135; 19898481; 20032419; 20118245; 20179761; 20190752; 20237496; 20383147; 20453842; 20637659; 20723304; 21383967; 21474487; 21669053; 21669059; 21750679; 21779181; 21988832; 22004975; 22221142; 22292024; 22294642; 22345473; 22401598; 22505724; 22536368; 22551306; 22798681; 22844345; 22911005; 23057733; 23228155; 23525753; 23861880; 23916875
imported from	http://purl.obolibrary.org/obo/ogg.owl
is gene marker of cell	http://purl.obolibrary.org/obo/CL_0000814 http://purl.obolibrary.org/obo/CL_0000084
label	CD247
modification date	20140408
NCBI GeneID	919
NCBI LocusTag	RP11-104L21.1
nomenclature status	Official from a nomenclature committee
organism NCBITaxon ID	9606
part_of	http://purl.obolibrary.org/obo/GO_0005886 http://purl.obolibrary.org/obo/GO_0042105 http://purl.obolibrary.org/obo/GO_0016021
participates_in	http://purl.obolibrary.org/obo/GO_0050776 http://purl.obolibrary.org/obo/GO_0042803 http://purl.obolibrary.org/obo/GO_0031295
prefixIRI	OGG:3000000919
prefLabel	CD247
symbol from nomenclature authority	CD247
term editor	Bin Zhao, Yue Liu, Oliver He
treeView	http://purl.obolibrary.org/obo/GO_0005886 http://purl.obolibrary.org/obo/GO_0042105 http://purl.obolibrary.org/obo/GO_0016021
subClassOf	http://purl.obolibrary.org/obo/OGG_2060009606

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Mapping To	Ontology	Source
http://purl.obolibrary.org/obo/OGG_3000000919	COVID-19	SAME_URI
http://purl.obolibrary.org/obo/OGG_3000000919	OGG	SAME_URI
http://identifiers.org/ncbigene/12503	REXO	LOOM
http://identifiers.org/ncbigene/12503	GEXO	LOOM
http://identifiers.org/ncbigene/12503	RETO	LOOM
http://www.semanticweb.org/ADMO#CD247	ADMO	LOOM
http://purl.obolibrary.org/obo/PR_000001027	NIFSTD	LOOM
http://identifiers.org/hgnc/1677	HGNC-NR	LOOM
http://identifiers.org/hgnc/1677	HRA	LOOM
http://purl.obolibrary.org/obo/OGG_3000000919	COVID-19	LOOM
http://purl.obolibrary.org/obo/OGG_3000000919	OGG	LOOM
http://identifiers.org/ncbigene/919	REXO	LOOM
http://identifiers.org/ncbigene/919	GEXO	LOOM
http://identifiers.org/ncbigene/919	RETO	LOOM
http://purl.obolibrary.org/obo/OGG_3000012503	OGG-MM	LOOM
http://purl.obolibrary.org/obo/OMIT_0030753	OMIT	LOOM
http://purl.obolibrary.org/obo/NCBIGene_919	CCO	LOOM
http://ontology.lst.tfo.upm.es/SPT/gene#ID_919	HENEGEO	LOOM