Kidney Tissue Atlas Ontology

Last uploaded: March 16, 2024
Preferred Name

cultured cell population
Synonyms

cell culture sample

Definitions

A processed material comprised of a collection of cultured cells that has been continuously maintained together in culture and shares a common propagation history. The extent of a 'cultured cell population' is restricted only in that all cell members must share a propagation history (ie be derived through a common lineage of passages from an initial culture). In being defined in this way, this class can be used to refer to the populations that researchers actually use in the practice of science - ie are the inputs to culturing, experimentation, and sharing. The cells in such populations will be a relatively uniform population as they have experienced similar selective pressures due to their continuous co-propagation. And this population will also have a single passage number, again owing to their common passaging history. Cultured cell populations represent only a collection of cells (ie do not include media, culture dishes, etc), and include populations of cultured unicellular organisms or cultured multicellular organism cells. They can exist under active culture, stored in a quiescent state for future use, or applied experimentally.

ID

http://purl.obolibrary.org/obo/OBI_0100060

comment

The extent of a 'cultured cell population' is restricted only in that all cell members must share a propagation history (ie be derived through a common lineage of passages from an initial culture). In being defined in this way, this class can be used to refer to the populations that researchers actually use in the practice of science - ie are the inputs to culturing, experimentation, and sharing. The cells in such populations will be a relatively uniform population as they have experienced similar selective pressures due to their continuous co-propagation. And this population will also have a single passage number, again owing to their common passaging history. Cultured cell populations represent only a collection of cells (ie do not include media, culture dishes, etc), and include populations of cultured unicellular organisms or cultured multicellular organism cells. They can exist under active culture, stored in a quiescent state for future use, or applied experimentally.

alternative term

cell culture sample

definition source

PERSON:Matthew Brush

editor note

2013-6-5 MHB: This OBI class was formerly called 'cell culture', but label changed and definition updated following CLO alignment efforts in spring 2013, during which the intent of this class was clarified to refer to portions of a culture or line rather than a complete cell culture or line.

editor preferred term

cultured cell population

example of usage

A cultured cell population applied in an experiment: "293 cells expressing TrkA were serum-starved for 18 hours and then neurotrophins were added for 10 min before cell harvest." (Lee, Ramee, et al. "Regulation of cell survival by secreted proneurotrophins." Science 294.5548 (2001): 1945-1948). A cultured cell population maintained in vitro: "Rat cortical neurons from 15 day embryos are grown in dissociated cell culture and maintained in vitro for 8–12 weeks" (Dichter, Marc A. "Rat cortical neurons in cell culture: culture methods, cell morphology, electrophysiology, and synapse formation." Brain Research 149.2 (1978): 279-293).

has curation status

http://purl.obolibrary.org/obo/IAO_0000120

has grain

http://purl.obolibrary.org/obo/CL_0000010

has part

http://purl.obolibrary.org/obo/CL_0000010

imported from

http://purl.obolibrary.org/obo/obi.owl

is_specified_output_of

http://purl.obolibrary.org/obo/OBI_0600024

label

cultured cell population

overlaps

http://purl.obolibrary.org/obo/CL_0000010

participates_in

http://purl.obolibrary.org/obo/OBI_0600024

prefixIRI

OBI:0100060

prefLabel

cultured cell population

term editor

PERSON:Matthew Brush

textual definition

A processed material comprised of a collection of cultured cells that has been continuously maintained together in culture and shares a common propagation history.

subClassOf

http://purl.obolibrary.org/obo/OBI_0000047

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http://purl.obolibrary.org/obo/OBI_0100060 PSDO LOOM
http://purl.obolibrary.org/obo/OBI_0100060 OHPI LOOM
http://purl.obolibrary.org/obo/OBI_0100060 HOIP LOOM
http://purl.obolibrary.org/obo/OBI_0100060 CHEAR LOOM
http://purl.obolibrary.org/obo/OBI_0100060 OMIT LOOM
http://purl.obolibrary.org/obo/OBI_0100060 OBCS LOOM
http://purl.obolibrary.org/obo/OBI_0100060 ONE LOOM
http://purl.obolibrary.org/obo/OBI_0100060 OPMI LOOM
http://purl.obolibrary.org/obo/OBI_0100060 OBI_BCGO LOOM
http://purl.obolibrary.org/obo/OBI_0100060 BCO LOOM
http://purl.obolibrary.org/obo/OBI_0100060 EGO LOOM
http://purl.obolibrary.org/obo/OBI_0100060 OBIB LOOM
http://purl.obolibrary.org/obo/OBI_0100060 BERO LOOM
http://purl.obolibrary.org/obo/OBI_0100060 ONS LOOM
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http://purl.obolibrary.org/obo/OBI_0100060 STATO LOOM
http://purl.obolibrary.org/obo/OBI_0100060 CIDO LOOM
http://purl.obolibrary.org/obo/OBI_0100060 OBI_IEE LOOM
http://purl.obolibrary.org/obo/OBI_0100060 ICO LOOM
http://purl.obolibrary.org/obo/OBI_0100060 DIDEO LOOM
http://purl.obolibrary.org/obo/OBI_0100060 GENEPIO LOOM
http://purl.obolibrary.org/obo/OBI_0100060 OHMI LOOM
http://purl.obolibrary.org/obo/OBI_0100060 NCRO LOOM