Intelligence Task Ontology

Last uploaded: September 9, 2022
Preferred Name

Sequence assembly

Synonyms

Assembly

Definitions

Assembly has two broad types, de-novo and re-sequencing. Re-sequencing is a specialised case of assembly, where an assembled (typically de-novo assembled) reference genome is available and is about 95% identical to the re-sequenced genome. All other cases of assembly are 'de-novo'.

ID

http://edamontology.org/topic_0196

comment

Assembly has two broad types, de-novo and re-sequencing. Re-sequencing is a specialised case of assembly, where an assembled (typically de-novo assembled) reference genome is available and is about 95% identical to the re-sequenced genome. All other cases of assembly are 'de-novo'.

hasDefinition

The assembly of fragments of a DNA sequence to reconstruct the original sequence.

hasNarrowSynonym

Assembly

label

Sequence assembly

prefixIRI

topic_0196

prefLabel

Sequence assembly

seeAlso

https://en.wikipedia.org/wiki/Sequence_assembly

subClassOf

http://edamontology.org/topic_0080

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http://edamontology.org/topic_0196 BERO SAME_URI
http://edamontology.org/topic_0196 EDAM SAME_URI
http://edamontology.org/topic_0196 BMT SAME_URI
http://purl.obolibrary.org/obo/SO_0000353 NGBO LOOM
http://purl.obolibrary.org/obo/SO_0000353 OBI LOOM
http://purl.obolibrary.org/obo/SO_0000353 SO LOOM
http://gbol.life/0.1/SequenceAssembly GBOL LOOM
http://purl.obolibrary.org/obo/SO_0000353 PDRO LOOM
http://purl.obolibrary.org/obo/SO_0000353 EUPATH LOOM
http://purl.obolibrary.org/obo/SO_0000353 HOIP LOOM
http://purl.obolibrary.org/obo/SO_0000353 OBCS LOOM
http://purl.obolibrary.org/obo/SO_0000353 ONE LOOM
http://purl.obolibrary.org/obo/SO_0000353 EGO LOOM
http://purl.obolibrary.org/obo/SO_0000353 OBI_IEE LOOM
http://purl.obolibrary.org/obo/SO_0000353 NIFSTD LOOM
http://purl.obolibrary.org/obo/SO_0000353 GENEPIO LOOM
http://edamontology.org/topic_0196 BERO LOOM
http://edamontology.org/topic_0196 EDAM LOOM
http://edamontology.org/topic_0196 BMT LOOM
http://semanticscience.org/resource/SIO_000989 HHEARP LOOM
http://semanticscience.org/resource/SIO_000989 SIO LOOM
http://semanticscience.org/resource/SIO_000989 CHEAR LOOM
http://semanticscience.org/resource/SIO_000989 BIOMO LOOM
http://semanticscience.org/resource/SIO_000989 SCO LOOM
http://semanticscience.org/resource/SIO_000989 HHEAR LOOM
http://semanticscience.org/resource/SIO_000989 HASCO LOOM
http://edamontology.org/data_0925 EDAM LOOM
http://edamontology.org/operation_0310 NGSONTO LOOM
http://edamontology.org/operation_0310 EDAM LOOM
http://semanticscience.org/resource/sequence-assembly MATERIALSMINE LOOM