Human Interaction Network Ontology

Last uploaded: June 27, 2014
Preferred Name

Processing of DNA ends prior to end rejoining
Synonyms
Definitions

Authored: Matthews, L, 2003-09-07 08:47:00 Ionizing radiation induced DNA double strand breaks often contain end groups that must be processed before the DNA can be rejoined. Possible candidate proteins for the processing steps include Artemis (a nuclease) (Ma and Lieber, 2002); WRN (a helicase with exonuclease activity) (Li and Comai, 2001; Yannone et al., 2002; Karmakar, et al., 2002a, 2002b); PNK (a 5'-OH kinase and 3'-phosphate phosphatase) (Chappell et al., 2002); the Mre11/Rad50/Nbs1 nuclease complex (D' Amours and Jackson, 2002); or hTdp1 (tyrosyl-DNA phosphodiesterase, which removes 3'-glycolates)(Inamdar et al., 2002; Valerie and Povirk, 2003). Precisely when processing of the DNA ends occurs during NHEJ is not known.

ID

http://purl.obolibrary.org/obo/HINO_0016688

comment

Authored: Matthews, L, 2003-09-07 08:47:00

Ionizing radiation induced DNA double strand breaks often contain end groups that must be processed before the DNA can be rejoined. Possible candidate proteins for the processing steps include Artemis (a nuclease) (Ma and Lieber, 2002); WRN (a helicase with exonuclease activity) (Li and Comai, 2001; Yannone et al., 2002; Karmakar, et al., 2002a, 2002b); PNK (a 5'-OH kinase and 3'-phosphate phosphatase) (Chappell et al., 2002); the Mre11/Rad50/Nbs1 nuclease complex (D' Amours and Jackson, 2002); or hTdp1 (tyrosyl-DNA phosphodiesterase, which removes 3'-glycolates)(Inamdar et al., 2002; Valerie and Povirk, 2003). Precisely when processing of the DNA ends occurs during NHEJ is not known.

definition source

Reactome, http://www.reactome.org

Pubmed11152456

Pubmed12032095

Pubmed12947387

Pubmed11955432

Pubmed11889123

Pubmed12023295

Pubmed12177300

Pubmed11477099

Pubmed11988766

label

Processing of DNA ends prior to end rejoining

located_in

http://purl.obolibrary.org/obo/NCBITaxon_9606

prefixIRI

HINO:0016688

prefLabel

Processing of DNA ends prior to end rejoining

seeAlso

Reactome Database ID Release 4375924

ReactomeREACT_1201

subClassOf

http://purl.obolibrary.org/obo/INO_0000021

has_part

http://purl.obolibrary.org/obo/HINO_0025725

http://purl.obolibrary.org/obo/HINO_0025726

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http://scai.fraunhofer.de/PWDICT#ID1647 PTS LOOM