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Glycomics Ontology
Last uploaded:
October 29, 2012
| Acronym | GLYCO |
| Visibility | Public |
| Description | The GlycO ontology provides an up-to-date knowledge base of experimentally verified glycan structures. Glycan (oligosaccharide or polysaccharide) structures are represented as trees of monosaccharide residues. Linkage to proteins and lipids is supported as well. Insertion of a new glycan is controlled by curation process that includes matching the new glycan against a canonical glyco-tree (a highly branched representation for a family of glycans). |
| Status | Production |
| Format | OWL |
| Categories |
| Bibliographic reference |
http://glycomics.ccrc.uga.edu/core4/informatics-ontologies.html
http://glycomics.ccrc.uga.edu/core4/informatics-ontologies.html
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| Contact | Will York ([email protected]) |
| Creation date | October 29, 2012
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| Documentation |
http://glycomics.ccrc.uga.edu/core4/informatics-ontologies.html
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| Homepage |
http://glycomics.ccrc.uga.edu/core4/informatics-ontologies.html
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| Notes |
The GlycO ontology provides an up-to-date knowledge base of experimentally verified glycan structures. Glycan (oligosaccharide or polysaccharide) structures are represented as trees of monosaccharide residues. Linkage to proteins and lipids is supported as well. Insertion of a new glycan is controlled by curation process that includes matching the new glycan against a canonical glyco-tree (a highly branched representation for a family of glycans).
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Contributors:
Matthew Eavenson
Arash Fard
Krzysztof J. Kochut
John A. Miller
Rene Ranzinger
Amit P. Sheth
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| Root of obsolete branch |
http://www.geneontology.org/formats/oboInOwl#ObsoleteClass
http://www.geneontology.org/formats/oboInOwl#ObsoleteClass
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| Submission date | October 29, 2012
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| Version information |
4.6.0.0
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| Missingimports |
http://purl.org/obo/owl/ro
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| uri |
http://glycomics.ccrc.uga.edu/ontologies/GlycO
http://glycomics.ccrc.uga.edu/ontologies/GlycO
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No views of GLYCO available
| Classes | 230 |
| Individuals | 1,784 |
| Properties | 65 |
| Maximum depth | 8 |
| Maximum number of children | 11 |
| Average number of children | 3 |
| Classes with a single child | 11 |
| Classes with more than 25 children | 0 |
| Classes with no definition | 15 |