Genomic Feature and Variation Ontology

Last uploaded: October 14, 2016
Preferred Name

Germline Cell
Synonyms
Definitions

The germline feature class captures information about genomic sequence features arising from germline cells. VCF files permit the explicit annotation with "Somatic Cell" via "SOMATIC" additional information. The absence of that field does not imply the presence of germine cell material though. Describes the "genomic-source" pragma in GVF.

ID

https://www.codamono.com/biointerchange/gfvo#GermlineCell

comment

The germline feature class captures information about genomic sequence features arising from germline cells. VCF files permit the explicit annotation with "Somatic Cell" via "SOMATIC" additional information. The absence of that field does not imply the presence of germine cell material though. Describes the "genomic-source" pragma in GVF.

isDefinedBy

http://sequenceontology.org/resources/gvf.html

label

Germline Cell

prefixIRI

GermlineCell

prefLabel

Germline Cell

seeAlso

http://en.wikipedia.org/wiki/Germline

subClassOf

https://www.codamono.com/biointerchange/gfvo#Cell

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Delete Mapping To Ontology Source
http://purl.obolibrary.org/obo/CL_0000039 CL LOOM
http://purl.obolibrary.org/obo/FBbt_00004860 FB-BT LOOM
http://purl.obolibrary.org/obo/ZFA_0009016 ZFA LOOM
http://purl.obolibrary.org/obo/ZFA_0009016 ZP LOOM
http://purl.org/obo/owl/CL#CL_0000039 BIOMODELS LOOM
http://purl.obolibrary.org/obo/TrOn_0000959 TRON LOOM
http://www.projecthalo.com/aura#Germline-Cell AURA LOOM
http://purl.obolibrary.org/obo/ECAO_0109240 ECAO LOOM
http://purl.obolibrary.org/obo/TAO_0009016 TAO LOOM
http://purl.obolibrary.org/obo/CL_0000039 PORO LOOM
http://purl.obolibrary.org/obo/CL_0000039 UBERON LOOM
http://purl.obolibrary.org/obo/CL_0000039 CLO LOOM
http://purl.obolibrary.org/obo/CL_0000039 AEO LOOM
http://purl.obolibrary.org/obo/CL_0000039 GCBO LOOM
http://purl.obolibrary.org/obo/CL_0000039 FOVT LOOM
http://purl.obolibrary.org/obo/CL_0000039 HOIP LOOM
http://purl.obolibrary.org/obo/CL_0000039 CHEAR LOOM
http://purl.obolibrary.org/obo/CL_0000039 RBO LOOM
http://purl.obolibrary.org/obo/CL_0000039 OBI_BCGO LOOM
http://purl.obolibrary.org/obo/CL_0000039 XPO LOOM
http://purl.obolibrary.org/obo/CL_0000039 DOID LOOM
http://purl.obolibrary.org/obo/CL_0000039 PCL LOOM
http://purl.obolibrary.org/obo/CL_0000039 PATO LOOM
http://purl.obolibrary.org/obo/CL_0000039 NIFDYS LOOM
http://purl.obolibrary.org/obo/CL_0000039 GO-PLUS LOOM
http://purl.obolibrary.org/obo/CL_0000039 HHEAR LOOM
http://purl.obolibrary.org/obo/CL_0000039 DDSS LOOM
http://purl.obolibrary.org/obo/CL_0000039 GSSO LOOM
http://purl.obolibrary.org/obo/CL_0000039 HRA LOOM
http://purl.obolibrary.org/obo/CL_0000039 UPHENO LOOM
http://purl.obolibrary.org/obo/CL_0000039 NIFSTD LOOM
http://purl.obolibrary.org/obo/CL_0000039 ECAO LOOM
http://purl.obolibrary.org/obo/CL_0000039 KTAO LOOM
http://purl.obolibrary.org/obo/CL_0000039 MAXO LOOM
http://purl.obolibrary.org/obo/CL_0000039 EHDAA2 LOOM
http://purl.obolibrary.org/obo/CL_0000039 AISM LOOM
http://purl.obolibrary.org/obo/CL_0000039 NMDCO LOOM
http://purl.obolibrary.org/obo/CL_0000039 OBA LOOM