Genomic Feature and Variation Ontology

Last uploaded: October 14, 2016
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Preferred Name

Genome Analysis
Synonyms
Definitions

A genome analysis denotes the type of procedure that was carried out to derive information from a genome assembly. "Genome Analysis" can be instantiated for cases where an application of "FILTER" in VCF cannot be linked to "Genotyping" or "Variant Calling", which are subclasses of "Genome Analysis". If possible, further annotation should be provided to indicate the actually utilized filter type.
ID

https://www.codamono.com/biointerchange/gfvo#GenomeAnalysis
comment

A genome analysis denotes the type of procedure that was carried out to derive information from a genome assembly. "Genome Analysis" can be instantiated for cases where an application of "FILTER" in VCF cannot be linked to "Genotyping" or "Variant Calling", which are subclasses of "Genome Analysis". If possible, further annotation should be provided to indicate the actually utilized filter type.
isDefinedBy

http://www.1000genomes.org/wiki/Analysis/Variant%20Call%20Format/vcf-variant-call-format-version-41

http://samtools.github.io/hts-specs/VCFv4.2.pdf

http://samtools.github.io/hts-specs/VCFv4.1.pdf
label

Genome Analysis
prefixIRI

GenomeAnalysis
prefLabel

Genome Analysis
seeAlso

http://en.wikipedia.org/wiki/Genomics#Genome_analysis
subClassOf

https://www.codamono.com/biointerchange/gfvo#ExperimentalMethod
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