Genomic Feature and Variation Ontology

Last uploaded: October 14, 2016
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Preferred Name

DNA Sequence
Synonyms
Definitions

A DNA sequence is a sequence of nucleic acids. It can be used to describe "FASTA" annotations in both GFF3 and GVF files as well as short sequences in VCF files.
ID

https://www.codamono.com/biointerchange/gfvo#DNASequence
comment

A DNA sequence is a sequence of nucleic acids. It can be used to describe "FASTA" annotations in both GFF3 and GVF files as well as short sequences in VCF files.
isDefinedBy

http://www.1000genomes.org/wiki/Analysis/Variant%20Call%20Format/vcf-variant-call-format-version-41

http://www.ensembl.org/info/website/upload/gff.html

http://samtools.github.io/hts-specs/VCFv4.2.pdf

http://sequenceontology.org/resources/gvf.html

http://samtools.github.io/hts-specs/VCFv4.1.pdf

http://sequenceontology.org/resources/gff3.html
label

DNA Sequence
prefixIRI

DNASequence
prefLabel

DNA Sequence
seeAlso

http://en.wikipedia.org/wiki/Dna_sequence
disjointWith

https://www.codamono.com/biointerchange/gfvo#PeptideSequence
subClassOf

https://www.codamono.com/biointerchange/gfvo#Sequence
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Delete Mapping To Ontology Source
http://purl.obolibrary.org/obo/FIX_0000313 FIX LOOM
http://purl.jp/bio/4/id/200906058885312599 IOBC LOOM
http://purl.obolibrary.org/obo/NCIT_C13299 BERO LOOM
http://purl.obolibrary.org/obo/OGI_0000073 OGI LOOM
http://purl.obolibrary.org/obo/OGI_0000073 OGSF LOOM
http://purl.obolibrary.org/obo/GENO_0000720 GENO LOOM
http://doe-generated-ontology.com/OntoAD#C0162326 ONTOAD LOOM
http://scai.fraunhofer.de/CSEO#CSEO_00000916 CSEO LOOM
http://id.nlm.nih.gov/mesh/D001483 MDM LOOM
http://onto.eva.mpg.de/ontologies/gfo-bio.owl#DNA_sequence GFO-BIO LOOM
http://edamontology.org/data_3494 EDAM LOOM
http://edamontology.org/data_3494 ITO LOOM
http://www.w3.org/2001/sw/hcls/ns/transmed/TMO_0131 TMO LOOM
http://www.loria.fr/~coulet/ontology/snpontology/version1.6/snpontology_full.owl#dna_sequence SOPHARM LOOM
http://www.loria.fr/~coulet/ontology/snpontology/version1.6/snpontology_full.owl#dna_sequence SNPO LOOM
http://purl.obolibrary.org/obo/ODGI.owl#DNA_Sequence OGDI LOOM
http://vocabs.lter-europe.net/EnvThes/msa0322 ENVTHES LOOM
http://www.projecthalo.com/aura#DNA-Sequence AURA LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C13299 NCIT LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C13299 SEPON LOOM
http://purl.obolibrary.org/obo/GSSO_007260 GSSO LOOM
http://purl.obolibrary.org/obo/SBOL_0000025 SBOL LOOM
https://purl.dsmz.de/schema/DNASequence D3O LOOM
http://www.co-ode.org/ontologies/ont.owl#DNASequence PHAGE LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0162326 OCHV LOOM
http://vocabs.lter-europe.net/EnvThes/21400 ENVTHES LOOM