GBOL

Last uploaded: August 9, 2019
Preferred Name

Sequence
Synonyms
Definitions

Represents a physical sequence Physical sequence can be a DNA, RNA or Protein molecule SequenceFeatureCore :feature - :Exon #* The hash key of the sequence sha384 xsd:string; #* The sequence, encoded with the default DNA or protein encoding sequence xsd:string; #* The optional assembly information of the sequence assembly @:SequenceAssembly?; #* Length of the sequence length xsd:long; #* The set of features annotating the sequence feature @:Feature*; #* Sample from which this piece of sequence originates from. sample @:Sample?; #* The organism from which the sequence originates from organism @:Organism?; #* An optional short description description xsd:string?; #* The common name of the sequence commonName xsd:string?; #* The recommended name of the sequence recommendedName xsd:string?; #* The standard name of the feature standardName xsd:string?; #* The short name of the sequence shortName xsd:string?; #* The accession id of the entry referenced accession xsd:string*; #* Any alternative names of the sequence alternativeNames xsd:string*; #* Short description of the function function xsd:string?; #* Any publication associated to feature annotation citation @:Citation*; #* The version of the sequence sequenceVersion xsd:PositiveInteger?; #* Reference to other entries holding entries with related information in other databases xref @:XRef*; #* A set off some additional notes note @:Note*; true

ID

http://gbol.life/0.1/Sequence

comment

Physical sequence can be a DNA, RNA or Protein molecule

SequenceFeatureCore

:feature - :Exon

#* The hash key of the sequence sha384 xsd:string; #* The sequence, encoded with the default DNA or protein encoding sequence xsd:string; #* The optional assembly information of the sequence assembly @:SequenceAssembly?; #* Length of the sequence length xsd:long; #* The set of features annotating the sequence feature @:Feature*; #* Sample from which this piece of sequence originates from. sample @:Sample?; #* The organism from which the sequence originates from organism @:Organism?; #* An optional short description description xsd:string?; #* The common name of the sequence commonName xsd:string?; #* The recommended name of the sequence recommendedName xsd:string?; #* The standard name of the feature standardName xsd:string?; #* The short name of the sequence shortName xsd:string?; #* The accession id of the entry referenced accession xsd:string*; #* Any alternative names of the sequence alternativeNames xsd:string*; #* Short description of the function function xsd:string?; #* Any publication associated to feature annotation citation @:Citation*; #* The version of the sequence sequenceVersion xsd:PositiveInteger?; #* Reference to other entries holding entries with related information in other databases xref @:XRef*; #* A set off some additional notes note @:Note*;

true

definition

Represents a physical sequence

Physical sequence can be a DNA, RNA or Protein molecule

SequenceFeatureCore

:feature - :Exon

#* The hash key of the sequence sha384 xsd:string; #* The sequence, encoded with the default DNA or protein encoding sequence xsd:string; #* The optional assembly information of the sequence assembly @:SequenceAssembly?; #* Length of the sequence length xsd:long; #* The set of features annotating the sequence feature @:Feature*; #* Sample from which this piece of sequence originates from. sample @:Sample?; #* The organism from which the sequence originates from organism @:Organism?; #* An optional short description description xsd:string?; #* The common name of the sequence commonName xsd:string?; #* The recommended name of the sequence recommendedName xsd:string?; #* The standard name of the feature standardName xsd:string?; #* The short name of the sequence shortName xsd:string?; #* The accession id of the entry referenced accession xsd:string*; #* Any alternative names of the sequence alternativeNames xsd:string*; #* Short description of the function function xsd:string?; #* Any publication associated to feature annotation citation @:Citation*; #* The version of the sequence sequenceVersion xsd:PositiveInteger?; #* Reference to other entries holding entries with related information in other databases xref @:XRef*; #* A set off some additional notes note @:Note*;

true

framing

:feature - :Exon

prefixIRI

Sequence

prefLabel

Sequence

propertyDefinitions

#* The hash key of the sequence sha384 xsd:string; #* The sequence, encoded with the default DNA or protein encoding sequence xsd:string; #* The optional assembly information of the sequence assembly @:SequenceAssembly?; #* Length of the sequence length xsd:long; #* The set of features annotating the sequence feature @:Feature*; #* Sample from which this piece of sequence originates from. sample @:Sample?; #* The organism from which the sequence originates from organism @:Organism?; #* An optional short description description xsd:string?; #* The common name of the sequence commonName xsd:string?; #* The recommended name of the sequence recommendedName xsd:string?; #* The standard name of the feature standardName xsd:string?; #* The short name of the sequence shortName xsd:string?; #* The accession id of the entry referenced accession xsd:string*; #* Any alternative names of the sequence alternativeNames xsd:string*; #* Short description of the function function xsd:string?; #* Any publication associated to feature annotation citation @:Citation*; #* The version of the sequence sequenceVersion xsd:PositiveInteger?; #* Reference to other entries holding entries with related information in other databases xref @:XRef*; #* A set off some additional notes note @:Note*;

subDomain

SequenceFeatureCore

virtual

true

subClassOf

http://www.w3.org/2002/07/owl#Thing

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Delete Mapping To Ontology Source
http://purl.obolibrary.org/obo/doid#sequence INBANCIDO LOOM
http://purl.obolibrary.org/obo/doid#sequence DOID LOOM
http://purl.obolibrary.org/obo/doid#sequence HHEAR LOOM
http://purl.obolibrary.org/obo/doid#sequence DDSS LOOM
http://purl.obolibrary.org/obo/doid#sequence CIDO LOOM
http://purl.obolibrary.org/obo/doid#sequence NIFSTD LOOM
http://sweetontology.net/reprSciProvenance/Sequence SWEET LOOM
http://purl.obolibrary.org/obo/OMIT#SO_3000001 OMIT LOOM
http://protozoadb.biowebdb.org/22/ogroup#Sequence OGROUP LOOM
http://purl.obolibrary.org/obo/CDAO_0000120 CDAO LOOM
http://purl.obolibrary.org/obo/CDAO_0000120 MIAPA LOOM
http://purl.jp/bio/12/glyco/glycan#sequence GLYCORDF LOOM
http://www.stkos-ontology/domain/plantbiodiversity#Sequence PDO_CAS LOOM
http://www.bootstrep.eu/ontology/GRO#Sequence GRO LOOM
http://sweetontology.net/reprMath/Sequence SWEET LOOM
http://www.loria.fr/~coulet/ontology/snpontology/version1.6/snpontology_full.owl#sequence SOPHARM LOOM
http://www.loria.fr/~coulet/ontology/snpontology/version1.6/snpontology_full.owl#sequence SNPO LOOM
http://www.semanticweb.org/ontologies/2011/7/Ontology1314368515010.owl#Sequence PHYLONT LOOM
http://semantic-dicom.org/seq#Sequence SEDI LOOM
http://purl.obolibrary.org/obo/B8467_0000323 LHN LOOM
http://edamontology.org/data_2044 EDAM LOOM
http://edamontology.org/data_2044 ITO LOOM
http://www.limics.org/hrdo/rdfns#type_id_12 HRDO LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C25673 NCIT LOOM
http://www.w3.org/2001/sw/hcls/ns/transmed/TMO_0128 TMO LOOM
http://scipion.i2pc.es/ontology/CRYOEM_0000013 CRYOEM LOOM
http://purl.bioontology.org/ontology/HL7/C3853789 HL7 LOOM
http://purl.obolibrary.org/obo/FBsp_00000801 FB-SP LOOM
http://purl.phyloviz.net/ontology/typon#Sequence TYPON LOOM
https://www.codamono.com/biointerchange/gfvo#Sequence GFVO LOOM
http://semanticscience.org/resource/SIO_001118 HASCO LOOM
http://semanticscience.org/resource/SIO_001118 HHEARP LOOM
http://semanticscience.org/resource/SIO_001118 SIO LOOM
http://semanticscience.org/resource/SIO_001118 CHEAR LOOM
http://semanticscience.org/resource/SIO_001118 BIOMO LOOM
http://semanticscience.org/resource/SIO_001118 SCO LOOM
http://semanticscience.org/resource/SIO_001118 HHEAR LOOM
http://semanticscience.org/resource/SIO_001118 POEM LOOM
http://semanticscience.org/resource/SIO_001118 GSSO LOOM
https://w3id.org/emmo#EMMO_92829beb_6ed4_4c88_bbd5_3bc7403e2895 BTO-EMMO LOOM
http://purl.bioontology.org/ontology/HL7/C1547787 HL7 LOOM
http://www.projecthalo.com/aura#Sequence AURA LOOM