Experimental Factor Ontology

Last uploaded: June 18, 2024
Preferred Name

thapsigargin

Synonyms

(3S,3aR,4S,6S,6aR,7S,8S,9bS)-6-(acetyloxy)-4-(butanoyloxy)-3,3a-dihydroxy-3,6,9-trimethyl-8-{[(2Z)-2-methylbut-2-enoyl]oxy}-2-oxo-2,3,3a,4,5,6,6a,7,8,9b-decahydroazuleno[4,5-b]furan-7-yl octanoate

Thapsigargin

octanoic acid {3S-[3alpha,3abeta,4alpha,6beta,6abeta,7beta,8alpha(Z),9balpha]}-6-(acetoxy)-2,3,3a,4,5,6,6a,7,8,9b-decahydro-3,3a-dihydroxy-3,6,9-trimethyl-8-[(2-methyl-1-oxo-2-butenyl)oxy]-2-oxo-4-(1-oxobutoxy)-azuleno[4,5-b]furan-7-yl ester

thapsigargine

Tg

Definitions

An organic heterotricyclic compound that is a hexa-oxygenated 6,7-guaianolide isolated fron the roots of Thapsia garganica L., Apiaceae. A potent skin irritant, it is used in traditional medicine as a counter-irritant. Thapsigargin inhibits Ca(2+)-transporting ATPase mediated uptake of calcium ions into sarcoplasmic reticulum and is used in experimentation examining the impacts of increasing cytosolic calcium concentrations.

ID

http://purl.obolibrary.org/obo/CHEBI_9516

charge

0

database_cross_reference

PMID:10477042

PDBeChem:TG1

PMID:17825049

LIPID_MAPS_instance:LMPR0103410001

PMID:9014219

KNApSAcK:C00003375

PMID:12410314

PMID:20357004

Wikipedia:Thapsigargin

KEGG:C09561

Reaxys:4649293

PMID:24598360

Beilstein:4649293

CAS:67526-95-8

PMID:16874404

definition

An organic heterotricyclic compound that is a hexa-oxygenated 6,7-guaianolide isolated fron the roots of Thapsia garganica L., Apiaceae. A potent skin irritant, it is used in traditional medicine as a counter-irritant. Thapsigargin inhibits Ca(2+)-transporting ATPase mediated uptake of calcium ions into sarcoplasmic reticulum and is used in experimentation examining the impacts of increasing cytosolic calcium concentrations.

formula

C34H50O12

has_alternative_id

CHEBI:363811

CHEBI:45970

has_exact_synonym

(3S,3aR,4S,6S,6aR,7S,8S,9bS)-6-(acetyloxy)-4-(butanoyloxy)-3,3a-dihydroxy-3,6,9-trimethyl-8-{[(2Z)-2-methylbut-2-enoyl]oxy}-2-oxo-2,3,3a,4,5,6,6a,7,8,9b-decahydroazuleno[4,5-b]furan-7-yl octanoate

Thapsigargin

has_obo_namespace

chebi_ontology

has_related_synonym

octanoic acid {3S-[3alpha,3abeta,4alpha,6beta,6abeta,7beta,8alpha(Z),9balpha]}-6-(acetoxy)-2,3,3a,4,5,6,6a,7,8,9b-decahydro-3,3a-dihydroxy-3,6,9-trimethyl-8-[(2-methyl-1-oxo-2-butenyl)oxy]-2-oxo-4-(1-oxobutoxy)-azuleno[4,5-b]furan-7-yl ester

thapsigargine

Tg

id

CHEBI:9516

in_subset

http://purl.obolibrary.org/obo/chebi#3_STAR

inchi

InChI=1S/C34H50O12/c1-9-12-13-14-15-17-24(37)43-28-26-25(20(5)27(28)44-30(38)19(4)11-3)29-34(41,33(8,40)31(39)45-29)22(42-23(36)16-10-2)18-32(26,7)46-21(6)35/h11,22,26-29,40-41H,9-10,12-18H2,1-8H3/b19-11-/t22-,26+,27-,28-,29-,32-,33+,34+/m0/s1

inchikey

IXFPJGBNCFXKPI-FSIHEZPISA-N

label

thapsigargin

mass

650.75360

monoisotopicmass

650.33023

notation

CHEBI:9516

prefLabel

thapsigargin

smiles

[H][C@@]1(OC(=O)C(\C)=C/C)[C@@H](OC(=O)CCCCCCC)[C@@]2([H])C(=C1C)[C@]1([H])OC(=O)[C@@](C)(O)[C@@]1(O)[C@H](C[C@]2(C)OC(C)=O)OC(=O)CCC

subClassOf

http://purl.obolibrary.org/obo/CHEBI_24913

http://purl.obolibrary.org/obo/CHEBI_24532

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http://purl.obolibrary.org/obo/CHEBI_9516 CHEBI SAME_URI
http://purl.obolibrary.org/obo/CHEBI_9516 PDRO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_9516 HOIP SAME_URI
http://purl.obolibrary.org/obo/CHEBI_9516 BERO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_9516 TXPO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_9516 BIOMODELS SAME_URI
http://purl.obolibrary.org/obo/CHEBI_9516 DRON SAME_URI
http://purl.obolibrary.org/obo/CHEBI_9516 UPHENO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_9516 ZP SAME_URI
http://purl.obolibrary.org/obo/CHEBI_9516 CHEBI LOOM
http://purl.obolibrary.org/obo/XCO_0000178 XCO LOOM
http://purl.obolibrary.org/obo/XCO_0000178 XCO LOOM
http://purl.obolibrary.org/obo/MESH_D019284 BERO LOOM
http://purl.bioontology.org/ontology/MESH/D019284 MESH LOOM
http://id.nlm.nih.gov/mesh/D019284 MDM LOOM
http://purl.obolibrary.org/obo/CHEBI_9516 PDRO LOOM
http://purl.obolibrary.org/obo/CHEBI_9516 HOIP LOOM
http://purl.obolibrary.org/obo/CHEBI_9516 BERO LOOM
http://purl.obolibrary.org/obo/CHEBI_9516 TXPO LOOM
http://purl.obolibrary.org/obo/CHEBI_9516 BIOMODELS LOOM
http://purl.obolibrary.org/obo/CHEBI_9516 UPHENO LOOM
http://purl.obolibrary.org/obo/CHEBI_9516 ZP LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D019284 RH-MESH LOOM
http://www.bioassayontology.org/bao#BAO_0001030 BAO LOOM
http://stirdf.jst.go.jp/id/200907011558838045 IOBC LOOM
http://purl.obolibrary.org/obo/OMIT_0019355 OMIT LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D02.455.426.392.368.284.500.888 RH-MESH LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D02.455.849.765.793.888 RH-MESH LOOM
http://purl.jp/bio/4/id/200906047495848631 IOBC LOOM
http://www.phoc.org.cn/pmo/class/PMO_00016727 PMAPP-PMO LOOM
http://purl.bioontology.org/ontology/CSP/4006-0091 CRISP LOOM
http://purl.obolibrary.org/obo/NCIT_C128634 BERO LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C128634 NCIT LOOM