Experimental Factor Ontology

Last uploaded: December 16, 2024
Preferred Name

caspofungin
Synonyms

caspofungin

1-[(4R,5S)-5-[(2-aminoethyl)amino]-N(2)-(10,12-dimethyl-1-oxotetradecyl)-4-hydroxy-L-ornithine]-5-[(3R)-3-hydroxy-L-ornithine]-pneumocandin B0

(4R,5S)-5-((2-aminoethyl)amino)-N(2)-(10,12-dimethyltetradecanoyl)-4-hydroxy-L-ornithyl-L-threonyl-trans-4-hydroxy-L-prolyl-(S)-4-hydroxy-4-(p-hydroxyphenyl)-L-threonyl-threo-3-hydroxy-L-ornithyl-trans-3-hydroxy-L-proline cyclic (6-1)-peptide

Caspofungin

(10R,12S)-N-{(2R,6S,9S,11R,12S,14aS,15S,20S,23S,25aS)-12-[(2-aminoethyl)amino]-20-[(1R)-3-amino-1-hydroxypropyl]-23-[(1S,2S)-1,2-dihydroxy-2-(4-hydroxyphenyl)ethyl]-2,11,15-trihydroxy-6-[(1R)-1-hydroxyethyl]-5,8,14,19,22,25-hexaoxotetracosahydro-1H-dipyrrolo[2,1-c:2',1'-l][1,4,7,10,13,16]hexaazacyclohenicosin-9-yl}-10,12-dimethyltetradecanamide

Definitions

A semisynthetic cyclic hexapeptide echinocandin antibiotic which exerts its effect by inhibiting the synthesis of 1,3-beta-D-glucan, an integral component of the fungal cell wall.

ID

http://purl.obolibrary.org/obo/CHEBI_474180

charge

0

database_cross_reference

SNOMEDCT:407732005

CAS:162808-62-0

DrugBank:DB00520

KEGG:D07626

PMID:24270605

SNOMEDCT:413770001

Beilstein:8471798

NCIt:C28910

Patent:US5378804

Drug_Central:2977

Patent:WO9421677

MeSH:C105417

definition

A semisynthetic cyclic hexapeptide echinocandin antibiotic which exerts its effect by inhibiting the synthesis of 1,3-beta-D-glucan, an integral component of the fungal cell wall.

formula

C52H88N10O15

has characteristic

http://purl.obolibrary.org/obo/CHEBI_24127

has_alternative_id

CHEBI:599509

has_exact_synonym

Caspofungin

(10R,12S)-N-{(2R,6S,9S,11R,12S,14aS,15S,20S,23S,25aS)-12-[(2-aminoethyl)amino]-20-[(1R)-3-amino-1-hydroxypropyl]-23-[(1S,2S)-1,2-dihydroxy-2-(4-hydroxyphenyl)ethyl]-2,11,15-trihydroxy-6-[(1R)-1-hydroxyethyl]-5,8,14,19,22,25-hexaoxotetracosahydro-1H-dipyrrolo[2,1-c:2',1'-l][1,4,7,10,13,16]hexaazacyclohenicosin-9-yl}-10,12-dimethyltetradecanamide

has_obo_namespace

chebi_ontology

has_related_synonym

caspofungin

1-[(4R,5S)-5-[(2-aminoethyl)amino]-N(2)-(10,12-dimethyl-1-oxotetradecyl)-4-hydroxy-L-ornithine]-5-[(3R)-3-hydroxy-L-ornithine]-pneumocandin B0

(4R,5S)-5-((2-aminoethyl)amino)-N(2)-(10,12-dimethyltetradecanoyl)-4-hydroxy-L-ornithyl-L-threonyl-trans-4-hydroxy-L-prolyl-(S)-4-hydroxy-4-(p-hydroxyphenyl)-L-threonyl-threo-3-hydroxy-L-ornithyl-trans-3-hydroxy-L-proline cyclic (6-1)-peptide

has_role

http://purl.obolibrary.org/obo/CHEBI_24127

id

CHEBI:474180

in_subset

http://purl.obolibrary.org/obo/chebi#3_STAR

inchi

InChI=1S/C52H88N10O15/c1-5-28(2)24-29(3)12-10-8-6-7-9-11-13-39(69)56-34-26-38(68)46(55-22-21-54)60-50(75)43-37(67)19-23-61(43)52(77)41(36(66)18-20-53)58-49(74)42(45(71)44(70)31-14-16-32(64)17-15-31)59-48(73)35-25-33(65)27-62(35)51(76)40(30(4)63)57-47(34)72/h14-17,28-30,33-38,40-46,55,63-68,70-71H,5-13,18-27,53-54H2,1-4H3,(H,56,69)(H,57,72)(H,58,74)(H,59,73)(H,60,75)/t28-,29+,30+,33+,34-,35-,36+,37-,38+,40-,41-,42-,43-,44-,45-,46-/m0/s1

inchikey

JYIKNQVWKBUSNH-WVDDFWQHSA-N

label

caspofungin

mass

1093.315

monoisotopicmass

1092.64306

notation

CHEBI:474180

preferred label

caspofungin

prefLabel

caspofungin

smiles

[C@@]12(N(C[C@@H](C1)O)C([C@H]([C@@H](C)O)NC(=O)[C@](C[C@H]([C@@H](NCCN)NC([C@@H]3[C@H](CCN3C([C@H]([C@@H](CCN)O)NC(=O)[C@H]([C@@H]([C@H](C4=CC=C(C=C4)O)O)O)NC2=O)=O)O)=O)O)(NC(CCCCCCCC[C@H](C[C@H](CC)C)C)=O)[H])=O)[H]

subClassOf

http://purl.obolibrary.org/obo/CHEBI_18059

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Mapping To Ontology Source
http://purl.obolibrary.org/obo/CHEBI_474180 DRON SAME_URI
http://purl.obolibrary.org/obo/CHEBI_474180 DRON SAME_URI
http://purl.obolibrary.org/obo/CHEBI_474180 PDRO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_474180 EUPATH SAME_URI
http://purl.obolibrary.org/obo/CHEBI_474180 CCONT SAME_URI
http://purl.obolibrary.org/obo/CHEBI_474180 HOIP SAME_URI
http://purl.obolibrary.org/obo/CHEBI_474180 DINTO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_474180 CHEBI SAME_URI
http://purl.obolibrary.org/obo/CHEBI_474180 COVID-19 SAME_URI
http://purl.obolibrary.org/obo/CHEBI_474180 BERO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_474180 DDSS SAME_URI
http://purl.obolibrary.org/obo/CHEBI_474180 TXPO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_474180 BIOMODELS SAME_URI
http://purl.obolibrary.org/obo/CHEBI_474180 UPHENO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_474180 PHIPO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_474180 FYPO SAME_URI
http://purl.obolibrary.org/obo/CHEBI_474180 DRON LOOM
http://purl.obolibrary.org/obo/ARO_3007501 ARO LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#C105417 RH-MESH LOOM
http://purl.obolibrary.org/obo/CHEBI_474180 DRON LOOM
http://purl.obolibrary.org/obo/CHEBI_474180 PDRO LOOM
http://purl.obolibrary.org/obo/CHEBI_474180 EUPATH LOOM
http://purl.obolibrary.org/obo/CHEBI_474180 CCONT LOOM
http://purl.obolibrary.org/obo/CHEBI_474180 HOIP LOOM
http://purl.obolibrary.org/obo/CHEBI_474180 DINTO LOOM
http://purl.obolibrary.org/obo/CHEBI_474180 CHEBI LOOM
http://purl.obolibrary.org/obo/CHEBI_474180 COVID-19 LOOM
http://purl.obolibrary.org/obo/CHEBI_474180 BERO LOOM
http://purl.obolibrary.org/obo/CHEBI_474180 DDSS LOOM
http://purl.obolibrary.org/obo/CHEBI_474180 TXPO LOOM
http://purl.obolibrary.org/obo/CHEBI_474180 BIOMODELS LOOM
http://purl.obolibrary.org/obo/CHEBI_474180 UPHENO LOOM
http://purl.obolibrary.org/obo/CHEBI_474180 PHIPO LOOM
http://purl.obolibrary.org/obo/CHEBI_474180 FYPO LOOM
http://purl.bioontology.org/ontology/NDFRT/N0000148694 NDFRT LOOM
http://purl.bioontology.org/ontology/VANDF/4021253 VANDF LOOM
http://purl.bioontology.org/ontology/LNC/MTHU015010 LOINC LOOM
http://purl.bioontology.org/ontology/SNOMEDCT/413770001 SNOMEDCT LOOM
http://purl.obolibrary.org/obo/ARO_3007501 ARO LOOM
http://www.semanticweb.org/zchero/ontologies/2023/11/SepsisOntology#Caspofungin SEPON LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C28910 NCIT LOOM
http://purl.bioontology.org/ontology/NDDF/009069 NDDF LOOM
http://www.phoc.org.cn/pmo/class/PMO_00026038 PMAPP-PMO LOOM
http://purl.bioontology.org/ontology/ATC/J02AX04 ATC LOOM
http://purl.bioontology.org/ontology/RXNORM/140108 RXNORM LOOM
http://purl.bioontology.org/ontology/MESH/D000077336 MESH LOOM
https://go.drugbank.com/drugs/DB00520 MDM LOOM
http://sbmi.uth.tmc.edu/ontology/ochv#C0537894 OCHV LOOM
http://purl.obolibrary.org/obo/NCIT_C28910 BERO LOOM
http://purl.bioontology.org/ontology/LNC/LP30480-5 LOINC LOOM